RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 NISCHQ9Y2I1 1504 aa42.2■■■■■ 4.35
COMMD3-BMI1-201ENST00000417470 CCDC180Q9P1Z9 1646 aa37.39■■■■□ 3.58
COMMD3-BMI1-201ENST00000417470 ABCC9O60706 1549 aa36.29■■■■□ 3.4
COMMD3-BMI1-201ENST00000417470 ZCCHC6Q5VYS8 1495 aaKnown RBP35.2■■■■□ 3.23
COMMD3-BMI1-201ENST00000417470 NACADO15069 1562 aa35.14■■■■□ 3.22
COMMD3-BMI1-201ENST00000417470 MYO15BQ96JP2 1530 aa35.1■■■■□ 3.21
COMMD3-BMI1-201ENST00000417470 RB1CC1Q8TDY2 1594 aa35.08■■■■□ 3.21
COMMD3-BMI1-201ENST00000417470 DCAF8L2P0C7V8 631 aa35.06■■■■□ 3.2
COMMD3-BMI1-201ENST00000417470 DCAF1Q9Y4B6 1507 aa35.01■■■■□ 3.19
COMMD3-BMI1-201ENST00000417470 UNC13AQ9UPW8 1703 aa34.19■■■■□ 3.06
COMMD3-BMI1-201ENST00000417470 SCRIBQ14160 1630 aa34.03■■■■□ 3.04
COMMD3-BMI1-201ENST00000417470 BICRAQ9NZM4 1560 aa34■■■■□ 3.03
COMMD3-BMI1-201ENST00000417470 PABPN1Q86U42 306 aaKnown RBP eCLIP33.97■■■■□ 3.03
COMMD3-BMI1-201ENST00000417470 SHROOM4Q9ULL8 1493 aa33.78■■■■□ 3
COMMD3-BMI1-201ENST00000417470 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
COMMD3-BMI1-201ENST00000417470 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
COMMD3-BMI1-201ENST00000417470 CC2D2AQ9P2K1 1620 aa32.87■■■□□ 2.85
COMMD3-BMI1-201ENST00000417470 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
COMMD3-BMI1-201ENST00000417470 BAZ1AQ9NRL2 1556 aaPredicted RBP32.69■■■□□ 2.82
COMMD3-BMI1-201ENST00000417470 SMARCA4P51532 1647 aa32.65■■■□□ 2.82
COMMD3-BMI1-201ENST00000417470 MROH2BQ7Z745 1585 aa32.49■■■□□ 2.79
COMMD3-BMI1-201ENST00000417470 NCAPD3P42695 1498 aa32.47■■■□□ 2.79
COMMD3-BMI1-201ENST00000417470 ATAD2BQ9ULI0 1458 aa32.47■■■□□ 2.79
COMMD3-BMI1-201ENST00000417470 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
COMMD3-BMI1-201ENST00000417470 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
COMMD3-BMI1-201ENST00000417470 HMGXB3Q12766 1538 aa32.28■■■□□ 2.76
COMMD3-BMI1-201ENST00000417470 RSF1Q96T23 1441 aaPredicted RBP32.25■■■□□ 2.75
COMMD3-BMI1-201ENST00000417470 BAZ1BQ9UIG0 1483 aaKnown RBP32.16■■■□□ 2.74
COMMD3-BMI1-201ENST00000417470 WIZO95785 1651 aa32.09■■■□□ 2.73
COMMD3-BMI1-201ENST00000417470 TOP2AP11388 1531 aaKnown RBP31.84■■■□□ 2.69
COMMD3-BMI1-201ENST00000417470 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.64
COMMD3-BMI1-201ENST00000417470 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
COMMD3-BMI1-201ENST00000417470 CADPSQ9ULU8 1353 aa31.51■■■□□ 2.63
COMMD3-BMI1-201ENST00000417470 NESP48681 1621 aa31.48■■■□□ 2.63
COMMD3-BMI1-201ENST00000417470 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
COMMD3-BMI1-201ENST00000417470 CFTRP13569 1480 aa31.37■■■□□ 2.61
COMMD3-BMI1-201ENST00000417470 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
COMMD3-BMI1-201ENST00000417470 ERCC6Q03468 1493 aa31.27■■■□□ 2.6
COMMD3-BMI1-201ENST00000417470 FANCD2Q9BXW9 1451 aa31.09■■■□□ 2.57
COMMD3-BMI1-201ENST00000417470 KIF21AQ7Z4S6 1674 aa31.07■■■□□ 2.56
COMMD3-BMI1-201ENST00000417470 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
COMMD3-BMI1-201ENST00000417470 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.56
COMMD3-BMI1-201ENST00000417470 THOC2Q8NI27 1593 aaKnown RBP30.96■■■□□ 2.55
COMMD3-BMI1-201ENST00000417470 CUX2O14529 1486 aa30.95■■■□□ 2.55
COMMD3-BMI1-201ENST00000417470 MRC2Q9UBG0 1479 aa30.94■■■□□ 2.54
COMMD3-BMI1-201ENST00000417470 WDR62O43379 1518 aa30.84■■■□□ 2.53
COMMD3-BMI1-201ENST00000417470 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
COMMD3-BMI1-201ENST00000417470 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
COMMD3-BMI1-201ENST00000417470 TOPBP1Q92547 1522 aa30.62■■■□□ 2.49
COMMD3-BMI1-201ENST00000417470 DNMBPQ6XZF7 1577 aa30.6■■■□□ 2.49
COMMD3-BMI1-201ENST00000417470 CUX1P39880 1505 aa30.46■■■□□ 2.47
COMMD3-BMI1-201ENST00000417470 IFT140Q96RY7 1462 aa30.4■■■□□ 2.46
COMMD3-BMI1-201ENST00000417470 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
COMMD3-BMI1-201ENST00000417470 POLA1P09884 1462 aaPredicted RBP30.38■■■□□ 2.45
COMMD3-BMI1-201ENST00000417470 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
COMMD3-BMI1-201ENST00000417470 TOP2BQ02880 1626 aa30.28■■■□□ 2.44
COMMD3-BMI1-201ENST00000417470 SOGA1O94964 1423 aa30.28■■■□□ 2.44
COMMD3-BMI1-201ENST00000417470 TARBP1Q13395 1621 aaKnown RBP30.26■■■□□ 2.44
COMMD3-BMI1-201ENST00000417470 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
COMMD3-BMI1-201ENST00000417470 SYNJ1O43426 1573 aa30.23■■■□□ 2.43
COMMD3-BMI1-201ENST00000417470 RAD54L2Q9Y4B4 1467 aa30.21■■■□□ 2.43
COMMD3-BMI1-201ENST00000417470 ZNF608Q9ULD9 1512 aaPredicted RBP30.18■■■□□ 2.42
COMMD3-BMI1-201ENST00000417470 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
COMMD3-BMI1-201ENST00000417470 ABCA10Q8WWZ4 1543 aa30.1■■■□□ 2.41
COMMD3-BMI1-201ENST00000417470 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.46e-7■■■■□ 23.4
COMMD3-BMI1-201ENST00000417470 TDRD9Q8NDG6 1382 aaKnown RBP30.04■■■□□ 2.4
COMMD3-BMI1-201ENST00000417470 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
COMMD3-BMI1-201ENST00000417470 GAPVD1Q14C86 1478 aa29.92■■■□□ 2.38
COMMD3-BMI1-201ENST00000417470 GRIN2BQ13224 1484 aa29.9■■■□□ 2.38
COMMD3-BMI1-201ENST00000417470 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
COMMD3-BMI1-201ENST00000417470 TRIM41Q8WV44 630 aa29.81■■■□□ 2.36
COMMD3-BMI1-201ENST00000417470 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
COMMD3-BMI1-201ENST00000417470 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
COMMD3-BMI1-201ENST00000417470 KIF27Q86VH2 1401 aa29.75■■■□□ 2.35
COMMD3-BMI1-201ENST00000417470 DNAJC5Q9H3Z4 198 aa29.75■■■□□ 2.35
COMMD3-BMI1-201ENST00000417470 PBRM1Q86U86 1689 aa29.75■■■□□ 2.35
COMMD3-BMI1-201ENST00000417470 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
COMMD3-BMI1-201ENST00000417470 OSCARQ8IYS5 282 aa29.72■■■□□ 2.35
COMMD3-BMI1-201ENST00000417470 SYNJ2O15056 1496 aa29.67■■■□□ 2.34
COMMD3-BMI1-201ENST00000417470 CHMP7Q8WUX9 453 aaPredicted RBP29.64■■■□□ 2.34
COMMD3-BMI1-201ENST00000417470 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
COMMD3-BMI1-201ENST00000417470 IGF1RP08069 1367 aa29.63■■■□□ 2.33
COMMD3-BMI1-201ENST00000417470 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
COMMD3-BMI1-201ENST00000417470 FBLN2P98095 1184 aa29.61■■■□□ 2.33
COMMD3-BMI1-201ENST00000417470 CHD1O14646 1710 aa29.58■■■□□ 2.33
COMMD3-BMI1-201ENST00000417470 ADAMTS12P58397 1594 aa29.58■■■□□ 2.33
COMMD3-BMI1-201ENST00000417470 GRIN2AQ12879 1464 aa29.49■■■□□ 2.31
COMMD3-BMI1-201ENST00000417470 RUSC2Q8N2Y8 1516 aa29.48■■■□□ 2.31
COMMD3-BMI1-201ENST00000417470 CUL7Q14999 1698 aa29.46■■■□□ 2.31
COMMD3-BMI1-201ENST00000417470 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
COMMD3-BMI1-201ENST00000417470 NUP160Q12769 1436 aa29.39■■■□□ 2.3
COMMD3-BMI1-201ENST00000417470 EEA1Q15075 1411 aa29.37■■■□□ 2.29
COMMD3-BMI1-201ENST00000417470 CLASP1Q7Z460 1538 aa29.36■■■□□ 2.29
COMMD3-BMI1-201ENST00000417470 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
COMMD3-BMI1-201ENST00000417470 CSRNP3Q8WYN3 585 aa29.28■■■□□ 2.28
COMMD3-BMI1-201ENST00000417470 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
COMMD3-BMI1-201ENST00000417470 PRXQ9BXM0 1461 aa29.25■■■□□ 2.27
COMMD3-BMI1-201ENST00000417470 ARHGEF11O15085 1522 aa29.17■■■□□ 2.26
COMMD3-BMI1-201ENST00000417470 KIAA0586Q9BVV6 1533 aa29.17■■■□□ 2.26
COMMD3-BMI1-201ENST00000417470 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms