RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ABCC10Q5T3U5 1492 aa24.92■■□□□ 1.58
SSB-204ENST00000417292 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
SSB-204ENST00000417292 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
SSB-204ENST00000417292 MAPKBP1O60336 1514 aa24.86■■□□□ 1.57
SSB-204ENST00000417292 DIP2BQ9P265 1576 aa24.84■■□□□ 1.57
SSB-204ENST00000417292 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
SSB-204ENST00000417292 ADCY10Q96PN6 1610 aa24.82■■□□□ 1.56
SSB-204ENST00000417292 KDM4FA0A1W2PPD8 638 aa24.8■■□□□ 1.56
SSB-204ENST00000417292 KDM6BO15054 1643 aa24.75■■□□□ 1.55
SSB-204ENST00000417292 TSPOAP1O95153 1857 aa24.68■■□□□ 1.54
SSB-204ENST00000417292 KIAA0586Q9BVV6 1533 aa24.67■■□□□ 1.54
SSB-204ENST00000417292 IGF1RP08069 1367 aa24.6■■□□□ 1.53
SSB-204ENST00000417292 ILDR1Q86SU0 546 aaPredicted RBP24.57■■□□□ 1.52
SSB-204ENST00000417292 PTPRGP23470 1445 aa24.55■■□□□ 1.52
SSB-204ENST00000417292 CUL7Q14999 1698 aa24.53■■□□□ 1.52
SSB-204ENST00000417292 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
SSB-204ENST00000417292 KIF27Q86VH2 1401 aa24.5■■□□□ 1.51
SSB-204ENST00000417292 ABCC2Q92887 1545 aa24.49■■□□□ 1.51
SSB-204ENST00000417292 PPRC1Q5VV67 1664 aaKnown RBP24.49■■□□□ 1.51
SSB-204ENST00000417292 ASXL2Q76L83 1435 aa24.47■■□□□ 1.51
SSB-204ENST00000417292 TNIKQ9UKE5 1360 aa24.45■■□□□ 1.5
SSB-204ENST00000417292 GLI2P10070 1586 aa24.45■■□□□ 1.5
SSB-204ENST00000417292 ADGRL1O94910 1474 aa24.44■■□□□ 1.5
SSB-204ENST00000417292 PLB1Q6P1J6 1458 aa24.43■■□□□ 1.5
SSB-204ENST00000417292 CARMIL2Q6F5E8 1435 aa24.42■■□□□ 1.5
SSB-204ENST00000417292 COL17A1Q9UMD9 1497 aaPredicted RBP24.4■■□□□ 1.5
SSB-204ENST00000417292 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
SSB-204ENST00000417292 UHRF1BP1LA0JNW5 1464 aa24.38■■□□□ 1.49
SSB-204ENST00000417292 IQGAP2Q13576 1575 aa24.35■■□□□ 1.49
SSB-204ENST00000417292 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
SSB-204ENST00000417292 EPRSP07814 1512 aaKnown RBP24.32■■□□□ 1.48
SSB-204ENST00000417292 DISP1Q96F81 1524 aa24.32■■□□□ 1.48
SSB-204ENST00000417292 MAP3K4Q9Y6R4 1608 aa24.31■■□□□ 1.48
SSB-204ENST00000417292 KDM5BQ9UGL1 1544 aa24.29■■□□□ 1.48
SSB-204ENST00000417292 HECW2Q9P2P5 1572 aa24.27■■□□□ 1.48
SSB-204ENST00000417292 TEX14Q8IWB6 1497 aa24.24■■□□□ 1.47
SSB-204ENST00000417292 ZCCHC11Q5TAX3 1644 aaKnown RBP24.23■■□□□ 1.47
SSB-204ENST00000417292 UGGT2Q9NYU1 1516 aa24.19■■□□□ 1.46
SSB-204ENST00000417292 KIAA0556O60303 1618 aa24.15■■□□□ 1.46
SSB-204ENST00000417292 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
SSB-204ENST00000417292 RAPGEF2Q9Y4G8 1499 aa24.11■■□□□ 1.45
SSB-204ENST00000417292 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
SSB-204ENST00000417292 CD109Q6YHK3 1445 aa24.04■■□□□ 1.44
SSB-204ENST00000417292 KCNH8Q96L42 1107 aa24.01■■□□□ 1.43
SSB-204ENST00000417292 CFAP43Q8NDM7 1665 aa24.01■■□□□ 1.43
SSB-204ENST00000417292 ABCA8O94911 1581 aa23.97■■□□□ 1.43
SSB-204ENST00000417292 KIF21BO75037 1637 aa23.96■■□□□ 1.43
SSB-204ENST00000417292 CTTNBP2Q8WZ74 1663 aa23.92■■□□□ 1.42
SSB-204ENST00000417292 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
SSB-204ENST00000417292 FBXO41Q8TF61 875 aa23.89■■□□□ 1.41
SSB-204ENST00000417292 ARAP3Q8WWN8 1544 aa23.88■■□□□ 1.41
SSB-204ENST00000417292 PTPRMP28827 1452 aa23.81■■□□□ 1.4
SSB-204ENST00000417292 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
SSB-204ENST00000417292 ADAMTSL3P82987 1691 aa23.8■■□□□ 1.4
SSB-204ENST00000417292 ATP10BO94823 1461 aa23.78■■□□□ 1.4
SSB-204ENST00000417292 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
SSB-204ENST00000417292 ABCA9Q8IUA7 1624 aa23.75■■□□□ 1.39
SSB-204ENST00000417292 RAPGEF3O95398 923 aa23.75■■□□□ 1.39
SSB-204ENST00000417292 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
SSB-204ENST00000417292 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
SSB-204ENST00000417292 BCORL1Q5H9F3 1711 aa23.69■■□□□ 1.38
SSB-204ENST00000417292 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
SSB-204ENST00000417292 NEO1Q92859 1461 aa23.68■■□□□ 1.38
SSB-204ENST00000417292 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
SSB-204ENST00000417292 PCF11O94913 1555 aaKnown RBP23.67■■□□□ 1.38
SSB-204ENST00000417292 LMTK3Q96Q04 1460 aa23.67■■□□□ 1.38
SSB-204ENST00000417292 ARID4BQ4LE39 1312 aaPredicted RBP23.63■■□□□ 1.37
SSB-204ENST00000417292 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
SSB-204ENST00000417292 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
SSB-204ENST00000417292 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
SSB-204ENST00000417292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.56■■□□□ 1.36
SSB-204ENST00000417292 HNRNPUL2Q1KMD3 747 aaKnown RBP23.56■■□□□ 1.36
SSB-204ENST00000417292 RIMS1Q86UR5 1692 aaKnown RBP23.56■■□□□ 1.36
SSB-204ENST00000417292 ARHGEF40Q8TER5 1519 aa23.55■■□□□ 1.36
SSB-204ENST00000417292 NUP153P49790 1475 aaKnown RBP23.54■■□□□ 1.36
SSB-204ENST00000417292 HSPA2P54652 639 aa23.53■■□□□ 1.36
SSB-204ENST00000417292 RICTORQ6R327 1708 aa23.51■■□□□ 1.35
SSB-204ENST00000417292 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
SSB-204ENST00000417292 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
SSB-204ENST00000417292 AKNAQ7Z591 1439 aa23.47■■□□□ 1.35
SSB-204ENST00000417292 SIGLEC1Q9BZZ2 1709 aa23.47■■□□□ 1.35
SSB-204ENST00000417292 PLPPR3Q6T4P5 718 aa23.46■■□□□ 1.35
SSB-204ENST00000417292 FANCAO15360 1455 aa23.44■■□□□ 1.34
SSB-204ENST00000417292 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
SSB-204ENST00000417292 CSRNP3Q8WYN3 585 aa23.42■■□□□ 1.34
SSB-204ENST00000417292 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
SSB-204ENST00000417292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.42■■□□□ 1.342e-20■□□□□ 9
SSB-204ENST00000417292 YEATS2Q9ULM3 1422 aa23.42■■□□□ 1.34
SSB-204ENST00000417292 CERKQ8TCT0 537 aa23.41■■□□□ 1.34
SSB-204ENST00000417292 POGZQ7Z3K3 1410 aa23.41■■□□□ 1.34
SSB-204ENST00000417292 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
SSB-204ENST00000417292 CFAP74Q9C0B2 1584 aa23.4■■□□□ 1.34
SSB-204ENST00000417292 ZFYVE16Q7Z3T8 1539 aa23.39■■□□□ 1.34
SSB-204ENST00000417292 TTC37Q6PGP7 1564 aa23.38■■□□□ 1.33
SSB-204ENST00000417292 EFCAB5A4FU69 1503 aa23.37■■□□□ 1.33
SSB-204ENST00000417292 MLECQ14165 292 aa23.36■■□□□ 1.33
SSB-204ENST00000417292 MAGI2Q86UL8 1455 aa23.34■■□□□ 1.33
SSB-204ENST00000417292 HECW1Q76N89 1606 aa23.33■■□□□ 1.33
SSB-204ENST00000417292 FER1L4A9Z1Z3 1794 aa23.32■■□□□ 1.32
SSB-204ENST00000417292 SCAPERQ9BY12 1400 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms