RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 SHROOM2Q13796 1616 aa36.85■■■■□ 3.49
CKLF-205ENST00000417030 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
CKLF-205ENST00000417030 PRG4Q92954 1404 aaPredicted RBP36.76■■■■□ 3.47
CKLF-205ENST00000417030 KIAA0586Q9BVV6 1533 aa36.75■■■■□ 3.47
CKLF-205ENST00000417030 RAPGEF2Q9Y4G8 1499 aa36.64■■■■□ 3.46
CKLF-205ENST00000417030 EEA1Q15075 1411 aa36.61■■■■□ 3.45
CKLF-205ENST00000417030 TRHP20396 242 aaPredicted RBP36.56■■■■□ 3.44
CKLF-205ENST00000417030 PRXQ9BXM0 1461 aa36.5■■■■□ 3.43
CKLF-205ENST00000417030 CSRNP3Q8WYN3 585 aa36.49■■■■□ 3.43
CKLF-205ENST00000417030 IQGAP2Q13576 1575 aa36.45■■■■□ 3.43
CKLF-205ENST00000417030 CARMIL2Q6F5E8 1435 aa36.42■■■■□ 3.42
CKLF-205ENST00000417030 FAM9AQ8IZU1 332 aaPredicted RBP36.37■■■■□ 3.41
CKLF-205ENST00000417030 PTPRGP23470 1445 aa36.31■■■■□ 3.4
CKLF-205ENST00000417030 TNIKQ9UKE5 1360 aa36.29■■■■□ 3.4
CKLF-205ENST00000417030 NPM1P06748 294 aaKnown RBP eCLIP36.29■■■■□ 3.4
CKLF-205ENST00000417030 CTTNBP2Q8WZ74 1663 aa36.26■■■■□ 3.4
CKLF-205ENST00000417030 UGGT2Q9NYU1 1516 aa36.26■■■■□ 3.4
CKLF-205ENST00000417030 DISP1Q96F81 1524 aa36.23■■■■□ 3.39
CKLF-205ENST00000417030 KIF21BO75037 1637 aa36.23■■■■□ 3.39
CKLF-205ENST00000417030 TTBK1Q5TCY1 1321 aaPredicted RBP36.22■■■■□ 3.39
CKLF-205ENST00000417030 ADCY10Q96PN6 1610 aa36.16■■■■□ 3.38
CKLF-205ENST00000417030 GOLGA3Q08378 1498 aa36.09■■■■□ 3.37
CKLF-205ENST00000417030 KIAA0556O60303 1618 aa36.08■■■■□ 3.37
CKLF-205ENST00000417030 UACAQ9BZF9 1416 aa36.03■■■■□ 3.36
CKLF-205ENST00000417030 MAPKBP1O60336 1514 aa36.02■■■■□ 3.36
CKLF-205ENST00000417030 UHRF1BP1LA0JNW5 1464 aa36■■■■□ 3.35
CKLF-205ENST00000417030 ABCC2Q92887 1545 aa35.98■■■■□ 3.35
CKLF-205ENST00000417030 FAM69CQ0P6D2 419 aa35.93■■■■□ 3.34
CKLF-205ENST00000417030 ABCC10Q5T3U5 1492 aa35.92■■■■□ 3.34
CKLF-205ENST00000417030 KIF13AQ9H1H9 1805 aa35.87■■■■□ 3.33
CKLF-205ENST00000417030 EHMT2Q96KQ7 1210 aa35.86■■■■□ 3.33
CKLF-205ENST00000417030 UBTFP17480 764 aaKnown RBP35.84■■■■□ 3.33
CKLF-205ENST00000417030 P3H3Q8IVL6 736 aa35.84■■■■□ 3.33
CKLF-205ENST00000417030 KDM5BQ9UGL1 1544 aa35.83■■■■□ 3.33
CKLF-205ENST00000417030 PLB1Q6P1J6 1458 aa35.8■■■■□ 3.32
CKLF-205ENST00000417030 SAMD9Q5K651 1589 aa35.79■■■■□ 3.32
CKLF-205ENST00000417030 DIP2BQ9P265 1576 aa35.78■■■■□ 3.32
CKLF-205ENST00000417030 ASXL2Q76L83 1435 aa35.78■■■■□ 3.32
CKLF-205ENST00000417030 RANGAP1P46060 587 aaPredicted RBP35.75■■■■□ 3.31
CKLF-205ENST00000417030 ABCA8O94911 1581 aa35.73■■■■□ 3.31
CKLF-205ENST00000417030 ZCCHC11Q5TAX3 1644 aaKnown RBP35.68■■■■□ 3.3
CKLF-205ENST00000417030 EFCAB5A4FU69 1503 aa35.67■■■■□ 3.3
CKLF-205ENST00000417030 GLI2P10070 1586 aa35.59■■■■□ 3.29
CKLF-205ENST00000417030 EPRSP07814 1512 aaKnown RBP35.56■■■■□ 3.28
CKLF-205ENST00000417030 FHOD3Q2V2M9 1422 aa35.56■■■■□ 3.28
CKLF-205ENST00000417030 WDR7Q9Y4E6 1490 aa35.54■■■■□ 3.28
CKLF-205ENST00000417030 ATP10BO94823 1461 aa35.49■■■■□ 3.27
CKLF-205ENST00000417030 ARHGAP35Q9NRY4 1499 aa35.49■■■■□ 3.27
CKLF-205ENST00000417030 TSPOAP1O95153 1857 aa35.49■■■■□ 3.27
CKLF-205ENST00000417030 RAPGEF6Q8TEU7 1601 aa35.48■■■■□ 3.27
CKLF-205ENST00000417030 ARID3CA6NKF2 412 aa35.48■■■■□ 3.27
CKLF-205ENST00000417030 KCNH8Q96L42 1107 aa35.45■■■■□ 3.27
CKLF-205ENST00000417030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.4■■■■□ 3.26
CKLF-205ENST00000417030 HNRNPUL2Q1KMD3 747 aaKnown RBP35.4■■■■□ 3.26
CKLF-205ENST00000417030 MAP3K4Q9Y6R4 1608 aa35.38■■■■□ 3.25
CKLF-205ENST00000417030 NUP153P49790 1475 aaKnown RBP35.37■■■■□ 3.25
CKLF-205ENST00000417030 LOC105371045A0A1W2PR82 267 aa35.36■■■■□ 3.25
CKLF-205ENST00000417030 CLIP1P30622 1438 aa35.34■■■■□ 3.25
CKLF-205ENST00000417030 PPRC1Q5VV67 1664 aaKnown RBP35.32■■■■□ 3.24
CKLF-205ENST00000417030 KDM6BO15054 1643 aa35.32■■■■□ 3.24
CKLF-205ENST00000417030 FMN1Q68DA7 1419 aa35.32■■■■□ 3.24
CKLF-205ENST00000417030 TEX14Q8IWB6 1497 aa35.31■■■■□ 3.24
CKLF-205ENST00000417030 CD109Q6YHK3 1445 aa35.3■■■■□ 3.24
CKLF-205ENST00000417030 PLEKHD1A6NEE1 506 aa35.26■■■■□ 3.24
CKLF-205ENST00000417030 CFAP43Q8NDM7 1665 aa35.24■■■■□ 3.23
CKLF-205ENST00000417030 CEP162Q5TB80 1403 aa35.23■■■■□ 3.23
CKLF-205ENST00000417030 MAGI3Q5TCQ9 1506 aa35.21■■■■□ 3.23
CKLF-205ENST00000417030 ATP1B4Q9UN42 357 aaPredicted RBP35.2■■■■□ 3.23
CKLF-205ENST00000417030 HECW1Q76N89 1606 aa35.14■■■■□ 3.22
CKLF-205ENST00000417030 ABCA9Q8IUA7 1624 aa35.11■■■■□ 3.21
CKLF-205ENST00000417030 COL17A1Q9UMD9 1497 aaPredicted RBP35.09■■■■□ 3.21
CKLF-205ENST00000417030 CDK11AQ9UQ88 783 aaPredicted RBP35.07■■■■□ 3.2
CKLF-205ENST00000417030 PCF11O94913 1555 aaKnown RBP35.07■■■■□ 3.2
CKLF-205ENST00000417030 CDK13Q14004 1512 aaKnown RBP35.06■■■■□ 3.2
CKLF-205ENST00000417030 CASKIN1Q8WXD9 1431 aa35.06■■■■□ 3.2
CKLF-205ENST00000417030 PHLDB1Q86UU1 1377 aa35.01■■■■□ 3.2
CKLF-205ENST00000417030 FYCO1Q9BQS8 1478 aa35■■■■□ 3.19
CKLF-205ENST00000417030 LRRIQ1Q96JM4 1722 aa34.99■■■■□ 3.19
CKLF-205ENST00000417030 AEBP2Q6ZN18 517 aaPredicted RBP34.95■■■■□ 3.19
CKLF-205ENST00000417030 ARAP3Q8WWN8 1544 aa34.92■■■■□ 3.18
CKLF-205ENST00000417030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.91■■■■□ 3.182e-6■■■■■ 51.7
CKLF-205ENST00000417030 NEO1Q92859 1461 aa34.91■■■■□ 3.18
CKLF-205ENST00000417030 CCDC18Q5T9S5 1454 aa34.9■■■■□ 3.18
CKLF-205ENST00000417030 TROQ12816 1431 aaPredicted RBP34.84■■■■□ 3.17
CKLF-205ENST00000417030 VPS8Q8N3P4 1428 aa34.81■■■■□ 3.16
CKLF-205ENST00000417030 TTC37Q6PGP7 1564 aa34.8■■■■□ 3.16
CKLF-205ENST00000417030 FANCAO15360 1455 aa34.78■■■■□ 3.16
CKLF-205ENST00000417030 PLCH2O75038 1416 aa34.77■■■■□ 3.16
CKLF-205ENST00000417030 AKNAQ7Z591 1439 aa34.76■■■■□ 3.16
CKLF-205ENST00000417030 RAPGEF3O95398 923 aa34.76■■■■□ 3.16
CKLF-205ENST00000417030 CFAP74Q9C0B2 1584 aa34.74■■■■□ 3.15
CKLF-205ENST00000417030 KIF14Q15058 1648 aa34.73■■■■□ 3.15
CKLF-205ENST00000417030 KDM4FA0A1W2PPD8 638 aa34.72■■■■□ 3.15
CKLF-205ENST00000417030 EFCAB2Q5VUJ9 269 aa34.7■■■■□ 3.15
CKLF-205ENST00000417030 DENND4BO75064 1496 aaPredicted RBP34.67■■■■□ 3.14
CKLF-205ENST00000417030 MYO5CQ9NQX4 1742 aa34.64■■■■□ 3.14
CKLF-205ENST00000417030 ADGRL1O94910 1474 aa34.58■■■■□ 3.13
CKLF-205ENST00000417030 SCAPERQ9BY12 1400 aa34.57■■■■□ 3.13
CKLF-205ENST00000417030 TIAM1Q13009 1591 aa34.57■■■■□ 3.12
CKLF-205ENST00000417030 FRMPD1Q5SYB0 1578 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms