RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
MSI2-203ENST00000416426 MAP3K1Q13233 1512 aa27.92■■■□□ 2.06
MSI2-203ENST00000416426 AQRO60306 1485 aaKnown RBP eCLIP27.91■■■□□ 2.069e-7■■■■■ 29.2
MSI2-203ENST00000416426 GRIN2BQ13224 1484 aa27.9■■■□□ 2.06
MSI2-203ENST00000416426 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
MSI2-203ENST00000416426 FHAD1B1AJZ9 1412 aa27.89■■■□□ 2.06
MSI2-203ENST00000416426 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
MSI2-203ENST00000416426 SAMD9Q5K651 1589 aa27.83■■■□□ 2.05
MSI2-203ENST00000416426 TIAM1Q13009 1591 aa27.82■■■□□ 2.04
MSI2-203ENST00000416426 KANK4Q5T7N3 995 aaPredicted RBP27.82■■■□□ 2.04
MSI2-203ENST00000416426 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
MSI2-203ENST00000416426 FHOD3Q2V2M9 1422 aa27.78■■■□□ 2.04
MSI2-203ENST00000416426 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
MSI2-203ENST00000416426 CFAP43Q8NDM7 1665 aa27.76■■■□□ 2.03
MSI2-203ENST00000416426 FYCO1Q9BQS8 1478 aa27.74■■■□□ 2.03
MSI2-203ENST00000416426 CASKIN1Q8WXD9 1431 aa27.72■■■□□ 2.03
MSI2-203ENST00000416426 P3H3Q8IVL6 736 aa27.71■■■□□ 2.03
MSI2-203ENST00000416426 FMN1Q68DA7 1419 aa27.7■■■□□ 2.03
MSI2-203ENST00000416426 RRBP1Q9P2E9 1410 aaKnown RBP27.7■■■□□ 2.02
MSI2-203ENST00000416426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.69■■■□□ 2.02
MSI2-203ENST00000416426 IQGAP2Q13576 1575 aa27.67■■■□□ 2.02
MSI2-203ENST00000416426 LRRC9Q6ZRR7 1453 aa27.67■■■□□ 2.02
MSI2-203ENST00000416426 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
MSI2-203ENST00000416426 CCER1Q8TC90 406 aaPredicted RBP27.64■■■□□ 2.01
MSI2-203ENST00000416426 DNAJC5Q9H3Z4 198 aa27.62■■■□□ 2.01
MSI2-203ENST00000416426 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
MSI2-203ENST00000416426 HNRNPUL2Q1KMD3 747 aaKnown RBP27.58■■■□□ 2.01
MSI2-203ENST00000416426 GRIN2AQ12879 1464 aa27.58■■■□□ 2
MSI2-203ENST00000416426 UGGT2Q9NYU1 1516 aa27.57■■■□□ 2
MSI2-203ENST00000416426 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
MSI2-203ENST00000416426 CCNB3Q8WWL7 1395 aa27.52■■■□□ 2
MSI2-203ENST00000416426 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
MSI2-203ENST00000416426 SYNJ2O15056 1496 aa27.5■■□□□ 1.99
MSI2-203ENST00000416426 ATP1B4Q9UN42 357 aaPredicted RBP27.44■■□□□ 1.98
MSI2-203ENST00000416426 PHLDB1Q86UU1 1377 aa27.43■■□□□ 1.98
MSI2-203ENST00000416426 CEP170Q5SW79 1584 aa27.4■■□□□ 1.98
MSI2-203ENST00000416426 KIAA0556O60303 1618 aa27.4■■□□□ 1.98
MSI2-203ENST00000416426 DISP1Q96F81 1524 aa27.39■■□□□ 1.97
MSI2-203ENST00000416426 HECW1Q76N89 1606 aa27.38■■□□□ 1.97
MSI2-203ENST00000416426 CCDC18Q5T9S5 1454 aa27.37■■□□□ 1.97
MSI2-203ENST00000416426 NUP160Q12769 1436 aa27.37■■□□□ 1.97
MSI2-203ENST00000416426 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
MSI2-203ENST00000416426 EHBP1L1Q8N3D4 1523 aa27.32■■□□□ 1.96
MSI2-203ENST00000416426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.31■■□□□ 1.961e-9■■■□□ 18.2
MSI2-203ENST00000416426 MTUS2Q5JR59 1369 aa27.3■■□□□ 1.96
MSI2-203ENST00000416426 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
MSI2-203ENST00000416426 EPRSP07814 1512 aaKnown RBP27.26■■□□□ 1.96
MSI2-203ENST00000416426 ARHGEF11O15085 1522 aa27.23■■□□□ 1.95
MSI2-203ENST00000416426 MAGI3Q5TCQ9 1506 aa27.23■■□□□ 1.95
MSI2-203ENST00000416426 NCOA2Q15596 1464 aa27.22■■□□□ 1.95
MSI2-203ENST00000416426 FGD6Q6ZV73 1430 aa27.21■■□□□ 1.95
MSI2-203ENST00000416426 CLSPNQ9HAW4 1339 aa27.19■■□□□ 1.94
MSI2-203ENST00000416426 RAPGEF6Q8TEU7 1601 aa27.19■■□□□ 1.94
MSI2-203ENST00000416426 FBLN2P98095 1184 aa27.19■■□□□ 1.94
MSI2-203ENST00000416426 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
MSI2-203ENST00000416426 CDK13Q14004 1512 aaKnown RBP27.16■■□□□ 1.94
MSI2-203ENST00000416426 MYOM3Q5VTT5 1437 aa27.15■■□□□ 1.94
MSI2-203ENST00000416426 CARMIL2Q6F5E8 1435 aa27.14■■□□□ 1.94
MSI2-203ENST00000416426 OSCARQ8IYS5 282 aa27.14■■□□□ 1.94
MSI2-203ENST00000416426 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
MSI2-203ENST00000416426 NUP153P49790 1475 aaKnown RBP27.13■■□□□ 1.93
MSI2-203ENST00000416426 JPH4Q96JJ6 628 aa27.13■■□□□ 1.93
MSI2-203ENST00000416426 ITGAEP38570 1179 aa27.12■■□□□ 1.93
MSI2-203ENST00000416426 SETD5Q9C0A6 1442 aa27.09■■□□□ 1.93
MSI2-203ENST00000416426 CHD1O14646 1710 aa27.09■■□□□ 1.93
MSI2-203ENST00000416426 RAB3GAP2Q9H2M9 1393 aa27.08■■□□□ 1.93
MSI2-203ENST00000416426 PTPN23Q9H3S7 1636 aa27.05■■□□□ 1.92
MSI2-203ENST00000416426 TCOF1Q13428 1488 aaKnown RBP27.03■■□□□ 1.92
MSI2-203ENST00000416426 PLB1Q6P1J6 1458 aa26.99■■□□□ 1.91
MSI2-203ENST00000416426 ABCA8O94911 1581 aa26.99■■□□□ 1.91
MSI2-203ENST00000416426 MIA2Q96PC5 1412 aa26.98■■□□□ 1.91
MSI2-203ENST00000416426 SHROOM2Q13796 1616 aa26.96■■□□□ 1.91
MSI2-203ENST00000416426 PTPRKQ15262 1439 aa26.94■■□□□ 1.9
MSI2-203ENST00000416426 CDK11AQ9UQ88 783 aaPredicted RBP26.92■■□□□ 1.9
MSI2-203ENST00000416426 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
MSI2-203ENST00000416426 ARID3CA6NKF2 412 aa26.9■■□□□ 1.9
MSI2-203ENST00000416426 ADCY10Q96PN6 1610 aa26.9■■□□□ 1.9
MSI2-203ENST00000416426 TROQ12816 1431 aaPredicted RBP26.9■■□□□ 1.9
MSI2-203ENST00000416426 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
MSI2-203ENST00000416426 MAPKBP1O60336 1514 aa26.89■■□□□ 1.9
MSI2-203ENST00000416426 NAIPQ13075 1403 aa26.81■■□□□ 1.88
MSI2-203ENST00000416426 AKNAQ7Z591 1439 aa26.81■■□□□ 1.88
MSI2-203ENST00000416426 PTPRGP23470 1445 aa26.8■■□□□ 1.88
MSI2-203ENST00000416426 ATP10BO94823 1461 aa26.8■■□□□ 1.88
MSI2-203ENST00000416426 CLASP1Q7Z460 1538 aa26.79■■□□□ 1.88
MSI2-203ENST00000416426 GCC2Q8IWJ2 1684 aa26.79■■□□□ 1.88
MSI2-203ENST00000416426 ITSN2Q9NZM3 1697 aa26.79■■□□□ 1.88
MSI2-203ENST00000416426 ZNF316A6NFI3 1004 aaPredicted RBP26.76■■□□□ 1.88
MSI2-203ENST00000416426 KIF14Q15058 1648 aa26.76■■□□□ 1.88
MSI2-203ENST00000416426 DNMT1P26358 1616 aaKnown RBP26.73■■□□□ 1.87
MSI2-203ENST00000416426 GPATCH8Q9UKJ3 1502 aaKnown RBP26.71■■□□□ 1.87
MSI2-203ENST00000416426 RIMBP3CA6NJZ7 1639 aa26.71■■□□□ 1.87
MSI2-203ENST00000416426 RIMBP3BA6NNM3 1639 aa26.71■■□□□ 1.87
MSI2-203ENST00000416426 RIMBP3Q9UFD9 1639 aa26.71■■□□□ 1.87
MSI2-203ENST00000416426 UACAQ9BZF9 1416 aa26.7■■□□□ 1.87
MSI2-203ENST00000416426 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
MSI2-203ENST00000416426 DAPK1P53355 1430 aa26.68■■□□□ 1.86
MSI2-203ENST00000416426 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
MSI2-203ENST00000416426 PLEKHD1A6NEE1 506 aa26.67■■□□□ 1.86
MSI2-203ENST00000416426 ROCK1Q13464 1354 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms