RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
PTPN12-203ENST00000415482 CHD1O14646 1710 aa15.71■□□□□ 0.11
PTPN12-203ENST00000415482 CLIP1P30622 1438 aa15.69■□□□□ 0.1
PTPN12-203ENST00000415482 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
PTPN12-203ENST00000415482 NUP160Q12769 1436 aa15.66■□□□□ 0.1
PTPN12-203ENST00000415482 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
PTPN12-203ENST00000415482 KIAA0586Q9BVV6 1533 aa15.63■□□□□ 0.09
PTPN12-203ENST00000415482 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
PTPN12-203ENST00000415482 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
PTPN12-203ENST00000415482 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
PTPN12-203ENST00000415482 P3H3Q8IVL6 736 aa15.58■□□□□ 0.08
PTPN12-203ENST00000415482 UGGT2Q9NYU1 1516 aa15.56■□□□□ 0.08
PTPN12-203ENST00000415482 SAMD9Q5K651 1589 aa15.56■□□□□ 0.08
PTPN12-203ENST00000415482 EFCAB5A4FU69 1503 aa15.55■□□□□ 0.08
PTPN12-203ENST00000415482 FHOD3Q2V2M9 1422 aa15.53■□□□□ 0.08
PTPN12-203ENST00000415482 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
PTPN12-203ENST00000415482 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.08
PTPN12-203ENST00000415482 DISP1Q96F81 1524 aa15.52■□□□□ 0.08
PTPN12-203ENST00000415482 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
PTPN12-203ENST00000415482 KIAA0556O60303 1618 aa15.49■□□□□ 0.07
PTPN12-203ENST00000415482 SHROOM2Q13796 1616 aa15.48■□□□□ 0.07
PTPN12-203ENST00000415482 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
PTPN12-203ENST00000415482 PRG4Q92954 1404 aaPredicted RBP15.46■□□□□ 0.06
PTPN12-203ENST00000415482 ERCC6L2Q5T890 1561 aa15.44■□□□□ 0.06
PTPN12-203ENST00000415482 CARMIL2Q6F5E8 1435 aa15.43■□□□□ 0.06
PTPN12-203ENST00000415482 TTBK1Q5TCY1 1321 aaPredicted RBP15.41■□□□□ 0.06
PTPN12-203ENST00000415482 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
PTPN12-203ENST00000415482 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
PTPN12-203ENST00000415482 PPARGC1BQ86YN6 1023 aaKnown RBP15.39■□□□□ 0.05
PTPN12-203ENST00000415482 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
PTPN12-203ENST00000415482 FYCO1Q9BQS8 1478 aa15.35■□□□□ 0.05
PTPN12-203ENST00000415482 ATP1B4Q9UN42 357 aaPredicted RBP15.35■□□□□ 0.05
PTPN12-203ENST00000415482 LRRIQ1Q96JM4 1722 aa15.33■□□□□ 0.04
PTPN12-203ENST00000415482 PTPRGP23470 1445 aa15.32■□□□□ 0.04
PTPN12-203ENST00000415482 PLB1Q6P1J6 1458 aa15.32■□□□□ 0.04
PTPN12-203ENST00000415482 APLP2Q06481 763 aa15.31■□□□□ 0.04
PTPN12-203ENST00000415482 RAPGEF6Q8TEU7 1601 aa15.3■□□□□ 0.04
PTPN12-203ENST00000415482 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
PTPN12-203ENST00000415482 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
PTPN12-203ENST00000415482 HECW1Q76N89 1606 aa15.29■□□□□ 0.04
PTPN12-203ENST00000415482 ABCA8O94911 1581 aa15.28■□□□□ 0.04
PTPN12-203ENST00000415482 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
PTPN12-203ENST00000415482 NUP153P49790 1475 aaKnown RBP15.28■□□□□ 0.04
PTPN12-203ENST00000415482 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.04
PTPN12-203ENST00000415482 MAP3K1Q13233 1512 aa15.26■□□□□ 0.03
PTPN12-203ENST00000415482 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
PTPN12-203ENST00000415482 CDK13Q14004 1512 aaKnown RBP15.25■□□□□ 0.03
PTPN12-203ENST00000415482 UACAQ9BZF9 1416 aa15.23■□□□□ 0.03
PTPN12-203ENST00000415482 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
PTPN12-203ENST00000415482 CCDC18Q5T9S5 1454 aa15.22■□□□□ 0.03
PTPN12-203ENST00000415482 LRRC9Q6ZRR7 1453 aa15.22■□□□□ 0.03
PTPN12-203ENST00000415482 MAGI3Q5TCQ9 1506 aa15.2■□□□□ 0.02
PTPN12-203ENST00000415482 ABCC2Q92887 1545 aa15.19■□□□□ 0.02
PTPN12-203ENST00000415482 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
PTPN12-203ENST00000415482 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
PTPN12-203ENST00000415482 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
PTPN12-203ENST00000415482 ATP10BO94823 1461 aa15.18■□□□□ 0.02
PTPN12-203ENST00000415482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
PTPN12-203ENST00000415482 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
PTPN12-203ENST00000415482 ADCY10Q96PN6 1610 aa15.16■□□□□ 0.02
PTPN12-203ENST00000415482 UHRF1BP1LA0JNW5 1464 aa15.16■□□□□ 0.02
PTPN12-203ENST00000415482 MTUS2Q5JR59 1369 aa15.15■□□□□ 0.02
PTPN12-203ENST00000415482 EHBP1L1Q8N3D4 1523 aa15.13■□□□□ 0.01
PTPN12-203ENST00000415482 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
PTPN12-203ENST00000415482 ZCCHC11Q5TAX3 1644 aaKnown RBP15.11■□□□□ 0.01
PTPN12-203ENST00000415482 KDM5BQ9UGL1 1544 aa15.11■□□□□ 0.01
PTPN12-203ENST00000415482 CYB5RLQ6IPT4 315 aa15.09■□□□□ 0.01
PTPN12-203ENST00000415482 PHLDB1Q86UU1 1377 aa15.09■□□□□ 0.01
PTPN12-203ENST00000415482 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
PTPN12-203ENST00000415482 TROQ12816 1431 aaPredicted RBP15.08■□□□□ 0.01
PTPN12-203ENST00000415482 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0
PTPN12-203ENST00000415482 NCOA2Q15596 1464 aa15.08■□□□□ 0
PTPN12-203ENST00000415482 PCGF6Q9BYE7 350 aa15.08■□□□□ 0
PTPN12-203ENST00000415482 PLEKHD1A6NEE1 506 aa15.06■□□□□ 0
PTPN12-203ENST00000415482 KIF14Q15058 1648 aa15.06■□□□□ 0
PTPN12-203ENST00000415482 RRBP1Q9P2E9 1410 aaKnown RBP15.01□□□□□ -0.01
PTPN12-203ENST00000415482 MYOM3Q5VTT5 1437 aa14.99□□□□□ -0.01
PTPN12-203ENST00000415482 ABCC10Q5T3U5 1492 aa14.99□□□□□ -0.01
PTPN12-203ENST00000415482 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTPN12-203ENST00000415482 KCNH8Q96L42 1107 aa14.98□□□□□ -0.01
PTPN12-203ENST00000415482 ASXL2Q76L83 1435 aa14.98□□□□□ -0.01
PTPN12-203ENST00000415482 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
PTPN12-203ENST00000415482 FGD6Q6ZV73 1430 aa14.98□□□□□ -0.01
PTPN12-203ENST00000415482 WDR7Q9Y4E6 1490 aa14.97□□□□□ -0.01
PTPN12-203ENST00000415482 TTC37Q6PGP7 1564 aa14.95□□□□□ -0.02
PTPN12-203ENST00000415482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.95□□□□□ -0.02
PTPN12-203ENST00000415482 GPATCH8Q9UKJ3 1502 aaKnown RBP14.95□□□□□ -0.02
PTPN12-203ENST00000415482 CDC42BPAQ5VT25 1732 aa14.94□□□□□ -0.02
PTPN12-203ENST00000415482 FAM50AQ14320 339 aaKnown RBP14.93□□□□□ -0.02
PTPN12-203ENST00000415482 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
PTPN12-203ENST00000415482 ITSN2Q9NZM3 1697 aa14.91□□□□□ -0.02
PTPN12-203ENST00000415482 MIA2Q96PC5 1412 aa14.91□□□□□ -0.02
PTPN12-203ENST00000415482 MAPKBP1O60336 1514 aa14.9□□□□□ -0.02
PTPN12-203ENST00000415482 ZNF644Q9H582 1327 aaPredicted RBP14.9□□□□□ -0.02
PTPN12-203ENST00000415482 CDC42BPBQ9Y5S2 1711 aa14.89□□□□□ -0.03
PTPN12-203ENST00000415482 TCOF1Q13428 1488 aaKnown RBP14.89□□□□□ -0.03
PTPN12-203ENST00000415482 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
PTPN12-203ENST00000415482 ITGAEP38570 1179 aa14.88□□□□□ -0.03
PTPN12-203ENST00000415482 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
PTPN12-203ENST00000415482 MYO5CQ9NQX4 1742 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms