RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 NISCHQ9Y2I1 1504 aa22.8■■□□□ 1.24
PTPN12-203ENST00000415482 CCDC180Q9P1Z9 1646 aa19.97■□□□□ 0.79
PTPN12-203ENST00000415482 ABCC9O60706 1549 aa19.13■□□□□ 0.65
PTPN12-203ENST00000415482 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
PTPN12-203ENST00000415482 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
PTPN12-203ENST00000415482 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
PTPN12-203ENST00000415482 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
PTPN12-203ENST00000415482 NACADO15069 1562 aa18.65■□□□□ 0.58
PTPN12-203ENST00000415482 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
PTPN12-203ENST00000415482 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
PTPN12-203ENST00000415482 SCRIBQ14160 1630 aa18.37■□□□□ 0.53
PTPN12-203ENST00000415482 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
PTPN12-203ENST00000415482 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
PTPN12-203ENST00000415482 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
PTPN12-203ENST00000415482 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
PTPN12-203ENST00000415482 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
PTPN12-203ENST00000415482 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
PTPN12-203ENST00000415482 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
PTPN12-203ENST00000415482 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
PTPN12-203ENST00000415482 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
PTPN12-203ENST00000415482 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
PTPN12-203ENST00000415482 WIZO95785 1651 aa17.47■□□□□ 0.39
PTPN12-203ENST00000415482 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
PTPN12-203ENST00000415482 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
PTPN12-203ENST00000415482 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
PTPN12-203ENST00000415482 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
PTPN12-203ENST00000415482 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
PTPN12-203ENST00000415482 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
PTPN12-203ENST00000415482 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
PTPN12-203ENST00000415482 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
PTPN12-203ENST00000415482 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
PTPN12-203ENST00000415482 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
PTPN12-203ENST00000415482 CFTRP13569 1480 aa16.78■□□□□ 0.28
PTPN12-203ENST00000415482 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
PTPN12-203ENST00000415482 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
PTPN12-203ENST00000415482 NESP48681 1621 aa16.74■□□□□ 0.27
PTPN12-203ENST00000415482 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
PTPN12-203ENST00000415482 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
PTPN12-203ENST00000415482 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
PTPN12-203ENST00000415482 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
PTPN12-203ENST00000415482 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
PTPN12-203ENST00000415482 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
PTPN12-203ENST00000415482 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
PTPN12-203ENST00000415482 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
PTPN12-203ENST00000415482 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
PTPN12-203ENST00000415482 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
PTPN12-203ENST00000415482 CUX1P39880 1505 aa16.49■□□□□ 0.23
PTPN12-203ENST00000415482 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
PTPN12-203ENST00000415482 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
PTPN12-203ENST00000415482 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
PTPN12-203ENST00000415482 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
PTPN12-203ENST00000415482 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
PTPN12-203ENST00000415482 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
PTPN12-203ENST00000415482 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
PTPN12-203ENST00000415482 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
PTPN12-203ENST00000415482 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
PTPN12-203ENST00000415482 SOGA1O94964 1423 aa16.3■□□□□ 0.2
PTPN12-203ENST00000415482 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
PTPN12-203ENST00000415482 WDR62O43379 1518 aa16.29■□□□□ 0.2
PTPN12-203ENST00000415482 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
PTPN12-203ENST00000415482 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
PTPN12-203ENST00000415482 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
PTPN12-203ENST00000415482 CUX2O14529 1486 aa16.2■□□□□ 0.18
PTPN12-203ENST00000415482 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
PTPN12-203ENST00000415482 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
PTPN12-203ENST00000415482 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
PTPN12-203ENST00000415482 EEA1Q15075 1411 aa16.15■□□□□ 0.18
PTPN12-203ENST00000415482 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
PTPN12-203ENST00000415482 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
PTPN12-203ENST00000415482 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
PTPN12-203ENST00000415482 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
PTPN12-203ENST00000415482 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
PTPN12-203ENST00000415482 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
PTPN12-203ENST00000415482 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.16
PTPN12-203ENST00000415482 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
PTPN12-203ENST00000415482 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.164e-7■■■□□ 15.7
PTPN12-203ENST00000415482 IGF1RP08069 1367 aa16.05■□□□□ 0.16
PTPN12-203ENST00000415482 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
PTPN12-203ENST00000415482 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
PTPN12-203ENST00000415482 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
PTPN12-203ENST00000415482 KIF21BO75037 1637 aa15.99■□□□□ 0.15
PTPN12-203ENST00000415482 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
PTPN12-203ENST00000415482 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
PTPN12-203ENST00000415482 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
PTPN12-203ENST00000415482 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.14
PTPN12-203ENST00000415482 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
PTPN12-203ENST00000415482 GOLGA3Q08378 1498 aa15.94■□□□□ 0.14
PTPN12-203ENST00000415482 CUL7Q14999 1698 aa15.93■□□□□ 0.14
PTPN12-203ENST00000415482 UBTFP17480 764 aaKnown RBP15.89■□□□□ 0.13
PTPN12-203ENST00000415482 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
PTPN12-203ENST00000415482 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
PTPN12-203ENST00000415482 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
PTPN12-203ENST00000415482 TNIKQ9UKE5 1360 aa15.85■□□□□ 0.13
PTPN12-203ENST00000415482 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.13
PTPN12-203ENST00000415482 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
PTPN12-203ENST00000415482 CEP162Q5TB80 1403 aa15.77■□□□□ 0.11
PTPN12-203ENST00000415482 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
PTPN12-203ENST00000415482 FBLN2P98095 1184 aa15.75■□□□□ 0.11
PTPN12-203ENST00000415482 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
PTPN12-203ENST00000415482 RANGAP1P46060 587 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms