RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
ZNF3-206ENST00000415068 KIAA0586Q9BVV6 1533 aa21.01■□□□□ 0.95
ZNF3-206ENST00000415068 VPS8Q8N3P4 1428 aa21■□□□□ 0.95
ZNF3-206ENST00000415068 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
ZNF3-206ENST00000415068 NUP160Q12769 1436 aa20.96■□□□□ 0.95
ZNF3-206ENST00000415068 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
ZNF3-206ENST00000415068 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
ZNF3-206ENST00000415068 IQGAP2Q13576 1575 aa20.9■□□□□ 0.94
ZNF3-206ENST00000415068 SAMD9Q5K651 1589 aa20.89■□□□□ 0.93
ZNF3-206ENST00000415068 MAP3K1Q13233 1512 aa20.83■□□□□ 0.93
ZNF3-206ENST00000415068 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.93
ZNF3-206ENST00000415068 FMN1Q68DA7 1419 aa20.83■□□□□ 0.93
ZNF3-206ENST00000415068 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
ZNF3-206ENST00000415068 FBLN2P98095 1184 aa20.82■□□□□ 0.92
ZNF3-206ENST00000415068 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
ZNF3-206ENST00000415068 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
ZNF3-206ENST00000415068 APLP2Q06481 763 aa20.77■□□□□ 0.92
ZNF3-206ENST00000415068 CASKIN1Q8WXD9 1431 aa20.77■□□□□ 0.91
ZNF3-206ENST00000415068 DISP1Q96F81 1524 aa20.75■□□□□ 0.91
ZNF3-206ENST00000415068 FHOD3Q2V2M9 1422 aa20.73■□□□□ 0.91
ZNF3-206ENST00000415068 CARMIL2Q6F5E8 1435 aa20.72■□□□□ 0.91
ZNF3-206ENST00000415068 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
ZNF3-206ENST00000415068 CHD1O14646 1710 aa20.72■□□□□ 0.91
ZNF3-206ENST00000415068 FYCO1Q9BQS8 1478 aa20.71■□□□□ 0.91
ZNF3-206ENST00000415068 KIAA0556O60303 1618 aa20.67■□□□□ 0.9
ZNF3-206ENST00000415068 SHROOM2Q13796 1616 aa20.66■□□□□ 0.9
ZNF3-206ENST00000415068 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
ZNF3-206ENST00000415068 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
ZNF3-206ENST00000415068 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
ZNF3-206ENST00000415068 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.89
ZNF3-206ENST00000415068 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
ZNF3-206ENST00000415068 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
ZNF3-206ENST00000415068 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
ZNF3-206ENST00000415068 CCDC18Q5T9S5 1454 aa20.55■□□□□ 0.88
ZNF3-206ENST00000415068 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
ZNF3-206ENST00000415068 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
ZNF3-206ENST00000415068 PTPRGP23470 1445 aa20.51■□□□□ 0.87
ZNF3-206ENST00000415068 CFAP43Q8NDM7 1665 aa20.51■□□□□ 0.87
ZNF3-206ENST00000415068 HECW1Q76N89 1606 aa20.49■□□□□ 0.87
ZNF3-206ENST00000415068 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
ZNF3-206ENST00000415068 ABCA8O94911 1581 aa20.46■□□□□ 0.87
ZNF3-206ENST00000415068 RAPGEF6Q8TEU7 1601 aa20.46■□□□□ 0.87
ZNF3-206ENST00000415068 ATP1B4Q9UN42 357 aaPredicted RBP20.45■□□□□ 0.86
ZNF3-206ENST00000415068 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
ZNF3-206ENST00000415068 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
ZNF3-206ENST00000415068 LRRIQ1Q96JM4 1722 aa20.42■□□□□ 0.86
ZNF3-206ENST00000415068 RRBP1Q9P2E9 1410 aaKnown RBP20.42■□□□□ 0.86
ZNF3-206ENST00000415068 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
ZNF3-206ENST00000415068 UACAQ9BZF9 1416 aa20.39■□□□□ 0.85
ZNF3-206ENST00000415068 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
ZNF3-206ENST00000415068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.38■□□□□ 0.85
ZNF3-206ENST00000415068 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
ZNF3-206ENST00000415068 ARHGEF11O15085 1522 aa20.35■□□□□ 0.85
ZNF3-206ENST00000415068 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
ZNF3-206ENST00000415068 ATP10BO94823 1461 aa20.35■□□□□ 0.85
ZNF3-206ENST00000415068 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
ZNF3-206ENST00000415068 MAGI3Q5TCQ9 1506 aa20.3■□□□□ 0.84
ZNF3-206ENST00000415068 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
ZNF3-206ENST00000415068 CCNB3Q8WWL7 1395 aa20.3■□□□□ 0.84
ZNF3-206ENST00000415068 CDK13Q14004 1512 aaKnown RBP20.29■□□□□ 0.84
ZNF3-206ENST00000415068 PLEKHD1A6NEE1 506 aa20.29■□□□□ 0.84
ZNF3-206ENST00000415068 TROQ12816 1431 aaPredicted RBP20.28■□□□□ 0.84
ZNF3-206ENST00000415068 ABCC2Q92887 1545 aa20.28■□□□□ 0.84
ZNF3-206ENST00000415068 SUPT6HQ7KZ85 1726 aaKnown RBP20.28■□□□□ 0.84
ZNF3-206ENST00000415068 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
ZNF3-206ENST00000415068 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
ZNF3-206ENST00000415068 KDM5BQ9UGL1 1544 aa20.25■□□□□ 0.83
ZNF3-206ENST00000415068 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
ZNF3-206ENST00000415068 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
ZNF3-206ENST00000415068 FGD6Q6ZV73 1430 aa20.2■□□□□ 0.82
ZNF3-206ENST00000415068 ADCY10Q96PN6 1610 aa20.2■□□□□ 0.82
ZNF3-206ENST00000415068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
ZNF3-206ENST00000415068 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
ZNF3-206ENST00000415068 TCOF1Q13428 1488 aaKnown RBP20.16■□□□□ 0.82
ZNF3-206ENST00000415068 HRCP23327 699 aa20.15■□□□□ 0.82
ZNF3-206ENST00000415068 ABCC10Q5T3U5 1492 aa20.12■□□□□ 0.81
ZNF3-206ENST00000415068 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
ZNF3-206ENST00000415068 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
ZNF3-206ENST00000415068 KIF14Q15058 1648 aa20.06■□□□□ 0.8
ZNF3-206ENST00000415068 ZCCHC11Q5TAX3 1644 aaKnown RBP20.06■□□□□ 0.8
ZNF3-206ENST00000415068 PTPN23Q9H3S7 1636 aa20.05■□□□□ 0.8
ZNF3-206ENST00000415068 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
ZNF3-206ENST00000415068 NPM1P06748 294 aaKnown RBP eCLIP20.04■□□□□ 0.8
ZNF3-206ENST00000415068 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
ZNF3-206ENST00000415068 ITSN2Q9NZM3 1697 aa20.01■□□□□ 0.79
ZNF3-206ENST00000415068 RSPH4AQ5TD94 716 aa20.01■□□□□ 0.79
ZNF3-206ENST00000415068 ACIN1Q9UKV3 1341 aaKnown RBP20.01■□□□□ 0.79
ZNF3-206ENST00000415068 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
ZNF3-206ENST00000415068 WDR7Q9Y4E6 1490 aa19.98■□□□□ 0.79
ZNF3-206ENST00000415068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.97■□□□□ 0.79
ZNF3-206ENST00000415068 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
ZNF3-206ENST00000415068 SETD5Q9C0A6 1442 aa19.96■□□□□ 0.79
ZNF3-206ENST00000415068 ARAP3Q8WWN8 1544 aa19.96■□□□□ 0.79
ZNF3-206ENST00000415068 RIMBP3CA6NJZ7 1639 aa19.95■□□□□ 0.78
ZNF3-206ENST00000415068 RIMBP3BA6NNM3 1639 aa19.95■□□□□ 0.78
ZNF3-206ENST00000415068 RIMBP3Q9UFD9 1639 aa19.95■□□□□ 0.78
ZNF3-206ENST00000415068 PLCH2O75038 1416 aa19.95■□□□□ 0.78
ZNF3-206ENST00000415068 AKNAQ7Z591 1439 aa19.95■□□□□ 0.78
ZNF3-206ENST00000415068 ROCK1Q13464 1354 aa19.95■□□□□ 0.78
ZNF3-206ENST00000415068 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms