RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
A1CF-208ENST00000414883 CUL7Q14999 1698 aa18.9■□□□□ 0.62
A1CF-208ENST00000414883 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
A1CF-208ENST00000414883 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
A1CF-208ENST00000414883 JPH4Q96JJ6 628 aa18.77■□□□□ 0.6
A1CF-208ENST00000414883 KIAA0586Q9BVV6 1533 aa18.76■□□□□ 0.59
A1CF-208ENST00000414883 PRG4Q92954 1404 aaPredicted RBP18.75■□□□□ 0.59
A1CF-208ENST00000414883 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
A1CF-208ENST00000414883 IQGAP2Q13576 1575 aa18.63■□□□□ 0.57
A1CF-208ENST00000414883 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
A1CF-208ENST00000414883 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
A1CF-208ENST00000414883 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
A1CF-208ENST00000414883 UGGT2Q9NYU1 1516 aa18.55■□□□□ 0.56
A1CF-208ENST00000414883 CTTNBP2Q8WZ74 1663 aa18.54■□□□□ 0.56
A1CF-208ENST00000414883 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
A1CF-208ENST00000414883 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
A1CF-208ENST00000414883 TNIKQ9UKE5 1360 aa18.49■□□□□ 0.55
A1CF-208ENST00000414883 PTPRGP23470 1445 aa18.49■□□□□ 0.55
A1CF-208ENST00000414883 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
A1CF-208ENST00000414883 KIAA0556O60303 1618 aa18.47■□□□□ 0.55
A1CF-208ENST00000414883 EEA1Q15075 1411 aa18.47■□□□□ 0.55
A1CF-208ENST00000414883 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
A1CF-208ENST00000414883 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
A1CF-208ENST00000414883 UHRF1BP1LA0JNW5 1464 aa18.4■□□□□ 0.54
A1CF-208ENST00000414883 ABCC2Q92887 1545 aa18.39■□□□□ 0.53
A1CF-208ENST00000414883 UACAQ9BZF9 1416 aa18.37■□□□□ 0.53
A1CF-208ENST00000414883 ABCC10Q5T3U5 1492 aa18.37■□□□□ 0.53
A1CF-208ENST00000414883 KIF21BO75037 1637 aa18.36■□□□□ 0.53
A1CF-208ENST00000414883 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
A1CF-208ENST00000414883 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
A1CF-208ENST00000414883 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
A1CF-208ENST00000414883 FOXD1Q16676 465 aa18.34■□□□□ 0.53
A1CF-208ENST00000414883 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
A1CF-208ENST00000414883 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.52
A1CF-208ENST00000414883 SAMD9Q5K651 1589 aa18.33■□□□□ 0.52
A1CF-208ENST00000414883 KDM5BQ9UGL1 1544 aa18.33■□□□□ 0.52
A1CF-208ENST00000414883 ABCA8O94911 1581 aa18.31■□□□□ 0.52
A1CF-208ENST00000414883 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
A1CF-208ENST00000414883 ZCCHC11Q5TAX3 1644 aaKnown RBP18.29■□□□□ 0.52
A1CF-208ENST00000414883 ASXL2Q76L83 1435 aa18.27■□□□□ 0.52
A1CF-208ENST00000414883 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.52
A1CF-208ENST00000414883 GLI2P10070 1586 aa18.22■□□□□ 0.51
A1CF-208ENST00000414883 P3H3Q8IVL6 736 aa18.21■□□□□ 0.51
A1CF-208ENST00000414883 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
A1CF-208ENST00000414883 PPRC1Q5VV67 1664 aaKnown RBP18.2■□□□□ 0.5
A1CF-208ENST00000414883 EPRSP07814 1512 aaKnown RBP18.18■□□□□ 0.5
A1CF-208ENST00000414883 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
A1CF-208ENST00000414883 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
A1CF-208ENST00000414883 EFCAB5A4FU69 1503 aa18.15■□□□□ 0.5
A1CF-208ENST00000414883 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
A1CF-208ENST00000414883 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.5
A1CF-208ENST00000414883 RAPGEF6Q8TEU7 1601 aa18.14■□□□□ 0.49
A1CF-208ENST00000414883 ATP10BO94823 1461 aa18.14■□□□□ 0.49
A1CF-208ENST00000414883 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
A1CF-208ENST00000414883 NUP153P49790 1475 aaKnown RBP18.1■□□□□ 0.49
A1CF-208ENST00000414883 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
A1CF-208ENST00000414883 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
A1CF-208ENST00000414883 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
A1CF-208ENST00000414883 KDM6BO15054 1643 aa18.06■□□□□ 0.48
A1CF-208ENST00000414883 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
A1CF-208ENST00000414883 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
A1CF-208ENST00000414883 COL17A1Q9UMD9 1497 aaPredicted RBP18.02■□□□□ 0.48
A1CF-208ENST00000414883 MAGI3Q5TCQ9 1506 aa17.99■□□□□ 0.47
A1CF-208ENST00000414883 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
A1CF-208ENST00000414883 CD109Q6YHK3 1445 aa17.98■□□□□ 0.47
A1CF-208ENST00000414883 ABCA9Q8IUA7 1624 aa17.98■□□□□ 0.47
A1CF-208ENST00000414883 TEX14Q8IWB6 1497 aa17.97■□□□□ 0.47
A1CF-208ENST00000414883 FMN1Q68DA7 1419 aa17.95■□□□□ 0.46
A1CF-208ENST00000414883 CDK13Q14004 1512 aaKnown RBP17.94■□□□□ 0.46
A1CF-208ENST00000414883 LRRIQ1Q96JM4 1722 aa17.94■□□□□ 0.46
A1CF-208ENST00000414883 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
A1CF-208ENST00000414883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
A1CF-208ENST00000414883 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
A1CF-208ENST00000414883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.45
A1CF-208ENST00000414883 PCF11O94913 1555 aaKnown RBP17.86■□□□□ 0.45
A1CF-208ENST00000414883 PLEKHD1A6NEE1 506 aa17.85■□□□□ 0.45
A1CF-208ENST00000414883 TTC37Q6PGP7 1564 aa17.85■□□□□ 0.45
A1CF-208ENST00000414883 ARAP3Q8WWN8 1544 aa17.85■□□□□ 0.45
A1CF-208ENST00000414883 CLIP1P30622 1438 aa17.84■□□□□ 0.45
A1CF-208ENST00000414883 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.45
A1CF-208ENST00000414883 NEO1Q92859 1461 aa17.81■□□□□ 0.44
A1CF-208ENST00000414883 KIF14Q15058 1648 aa17.8■□□□□ 0.44
A1CF-208ENST00000414883 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
A1CF-208ENST00000414883 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
A1CF-208ENST00000414883 FYCO1Q9BQS8 1478 aa17.78■□□□□ 0.44
A1CF-208ENST00000414883 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
A1CF-208ENST00000414883 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.44
A1CF-208ENST00000414883 TROQ12816 1431 aaPredicted RBP17.76■□□□□ 0.43
A1CF-208ENST00000414883 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
A1CF-208ENST00000414883 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
A1CF-208ENST00000414883 FANCAO15360 1455 aa17.74■□□□□ 0.43
A1CF-208ENST00000414883 RICTORQ6R327 1708 aa17.73■□□□□ 0.43
A1CF-208ENST00000414883 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
A1CF-208ENST00000414883 PLCH2O75038 1416 aa17.72■□□□□ 0.43
A1CF-208ENST00000414883 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
A1CF-208ENST00000414883 LOC105371045A0A1W2PR82 267 aa17.72■□□□□ 0.43
A1CF-208ENST00000414883 RAPGEF3O95398 923 aa17.72■□□□□ 0.43
A1CF-208ENST00000414883 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
A1CF-208ENST00000414883 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
A1CF-208ENST00000414883 ADGRL1O94910 1474 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms