RNA–Protein interactions for RNA: ENST00000413748.6

SCG5-202, Transcript of secretogranin V, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCG5, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-202ENST00000413748 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
SCG5-202ENST00000413748 ABCC10Q5T3U5 1492 aa17.62■□□□□ 0.41
SCG5-202ENST00000413748 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
SCG5-202ENST00000413748 MAPKBP1O60336 1514 aa17.6■□□□□ 0.41
SCG5-202ENST00000413748 DIP2BQ9P265 1576 aa17.6■□□□□ 0.41
SCG5-202ENST00000413748 FAM69CQ0P6D2 419 aa17.56■□□□□ 0.4
SCG5-202ENST00000413748 KIAA0586Q9BVV6 1533 aa17.49■□□□□ 0.39
SCG5-202ENST00000413748 KDM6BO15054 1643 aa17.48■□□□□ 0.39
SCG5-202ENST00000413748 TSPOAP1O95153 1857 aa17.48■□□□□ 0.39
SCG5-202ENST00000413748 KDM4FA0A1W2PPD8 638 aa17.47■□□□□ 0.39
SCG5-202ENST00000413748 IGF1RP08069 1367 aa17.46■□□□□ 0.39
SCG5-202ENST00000413748 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCG5-202ENST00000413748 CUL7Q14999 1698 aa17.44■□□□□ 0.38
SCG5-202ENST00000413748 PPRC1Q5VV67 1664 aaKnown RBP17.39■□□□□ 0.37
SCG5-202ENST00000413748 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
SCG5-202ENST00000413748 PTPRGP23470 1445 aa17.36■□□□□ 0.37
SCG5-202ENST00000413748 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
SCG5-202ENST00000413748 GLI2P10070 1586 aa17.32■□□□□ 0.36
SCG5-202ENST00000413748 ASXL2Q76L83 1435 aa17.31■□□□□ 0.36
SCG5-202ENST00000413748 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
SCG5-202ENST00000413748 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
SCG5-202ENST00000413748 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
SCG5-202ENST00000413748 IQGAP2Q13576 1575 aa17.29■□□□□ 0.36
SCG5-202ENST00000413748 UHRF1BP1LA0JNW5 1464 aa17.29■□□□□ 0.36
SCG5-202ENST00000413748 DISP1Q96F81 1524 aa17.28■□□□□ 0.36
SCG5-202ENST00000413748 COL17A1Q9UMD9 1497 aaPredicted RBP17.28■□□□□ 0.36
SCG5-202ENST00000413748 PLB1Q6P1J6 1458 aa17.27■□□□□ 0.36
SCG5-202ENST00000413748 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.35
SCG5-202ENST00000413748 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
SCG5-202ENST00000413748 ADGRL1O94910 1474 aa17.24■□□□□ 0.35
SCG5-202ENST00000413748 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
SCG5-202ENST00000413748 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
SCG5-202ENST00000413748 KDM5BQ9UGL1 1544 aa17.22■□□□□ 0.35
SCG5-202ENST00000413748 ILDR1Q86SU0 546 aaPredicted RBP17.21■□□□□ 0.35
SCG5-202ENST00000413748 ZCCHC11Q5TAX3 1644 aaKnown RBP17.2■□□□□ 0.34
SCG5-202ENST00000413748 UGGT2Q9NYU1 1516 aa17.19■□□□□ 0.34
SCG5-202ENST00000413748 KIAA0556O60303 1618 aa17.16■□□□□ 0.34
SCG5-202ENST00000413748 HECW2Q9P2P5 1572 aa17.13■□□□□ 0.33
SCG5-202ENST00000413748 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
SCG5-202ENST00000413748 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
SCG5-202ENST00000413748 WDR7Q9Y4E6 1490 aa17.09■□□□□ 0.33
SCG5-202ENST00000413748 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
SCG5-202ENST00000413748 ABCA8O94911 1581 aa17.03■□□□□ 0.32
SCG5-202ENST00000413748 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
SCG5-202ENST00000413748 MAGI3Q5TCQ9 1506 aa17.02■□□□□ 0.32
SCG5-202ENST00000413748 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
SCG5-202ENST00000413748 KIF21BO75037 1637 aa16.98■□□□□ 0.31
SCG5-202ENST00000413748 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
SCG5-202ENST00000413748 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
SCG5-202ENST00000413748 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
SCG5-202ENST00000413748 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
SCG5-202ENST00000413748 ATP10BO94823 1461 aa16.87■□□□□ 0.29
SCG5-202ENST00000413748 ABCA9Q8IUA7 1624 aa16.86■□□□□ 0.29
SCG5-202ENST00000413748 ADAMTSL3P82987 1691 aa16.86■□□□□ 0.29
SCG5-202ENST00000413748 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
SCG5-202ENST00000413748 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
SCG5-202ENST00000413748 PTPRMP28827 1452 aa16.82■□□□□ 0.28
SCG5-202ENST00000413748 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
SCG5-202ENST00000413748 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
SCG5-202ENST00000413748 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
SCG5-202ENST00000413748 BCORL1Q5H9F3 1711 aa16.78■□□□□ 0.28
SCG5-202ENST00000413748 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.27
SCG5-202ENST00000413748 MADDQ8WXG6 1647 aa16.77■□□□□ 0.27
SCG5-202ENST00000413748 NEO1Q92859 1461 aa16.76■□□□□ 0.27
SCG5-202ENST00000413748 PHLDB1Q86UU1 1377 aa16.76■□□□□ 0.27
SCG5-202ENST00000413748 FBXO41Q8TF61 875 aa16.75■□□□□ 0.27
SCG5-202ENST00000413748 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
SCG5-202ENST00000413748 LMTK3Q96Q04 1460 aa16.73■□□□□ 0.27
SCG5-202ENST00000413748 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
SCG5-202ENST00000413748 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
SCG5-202ENST00000413748 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
SCG5-202ENST00000413748 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
SCG5-202ENST00000413748 RIMS1Q86UR5 1692 aaKnown RBP16.69■□□□□ 0.26
SCG5-202ENST00000413748 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
SCG5-202ENST00000413748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.63■□□□□ 0.25
SCG5-202ENST00000413748 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
SCG5-202ENST00000413748 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
SCG5-202ENST00000413748 DENND4BO75064 1496 aaPredicted RBP16.62■□□□□ 0.25
SCG5-202ENST00000413748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
SCG5-202ENST00000413748 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
SCG5-202ENST00000413748 FAM9AQ8IZU1 332 aaPredicted RBP16.62■□□□□ 0.25
SCG5-202ENST00000413748 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
SCG5-202ENST00000413748 AKNAQ7Z591 1439 aa16.62■□□□□ 0.25
SCG5-202ENST00000413748 ZMYM4Q5VZL5 1548 aa16.61■□□□□ 0.25
SCG5-202ENST00000413748 FANCAO15360 1455 aa16.61■□□□□ 0.25
SCG5-202ENST00000413748 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
SCG5-202ENST00000413748 CFAP74Q9C0B2 1584 aa16.6■□□□□ 0.25
SCG5-202ENST00000413748 HSPA2P54652 639 aa16.58■□□□□ 0.24
SCG5-202ENST00000413748 ZFYVE16Q7Z3T8 1539 aa16.56■□□□□ 0.24
SCG5-202ENST00000413748 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
SCG5-202ENST00000413748 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
SCG5-202ENST00000413748 PLEKHD1A6NEE1 506 aa16.54■□□□□ 0.24
SCG5-202ENST00000413748 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
SCG5-202ENST00000413748 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
SCG5-202ENST00000413748 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
SCG5-202ENST00000413748 MAGI2Q86UL8 1455 aa16.52■□□□□ 0.23
SCG5-202ENST00000413748 POGZQ7Z3K3 1410 aa16.51■□□□□ 0.23
SCG5-202ENST00000413748 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
SCG5-202ENST00000413748 EEA1Q15075 1411 aa16.49■□□□□ 0.23
SCG5-202ENST00000413748 ARHGEF12Q9NZN5 1544 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms