RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ARAP1Q96P48 1450 aa17.07■□□□□ 0.32
TMEM248-202ENST00000413593 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
TMEM248-202ENST00000413593 SHROOM2Q13796 1616 aa17■□□□□ 0.31
TMEM248-202ENST00000413593 KIAA0586Q9BVV6 1533 aa17■□□□□ 0.31
TMEM248-202ENST00000413593 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
TMEM248-202ENST00000413593 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
TMEM248-202ENST00000413593 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
TMEM248-202ENST00000413593 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
TMEM248-202ENST00000413593 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
TMEM248-202ENST00000413593 EEA1Q15075 1411 aa16.91■□□□□ 0.3
TMEM248-202ENST00000413593 CSRNP3Q8WYN3 585 aa16.9■□□□□ 0.3
TMEM248-202ENST00000413593 IQGAP2Q13576 1575 aa16.86■□□□□ 0.29
TMEM248-202ENST00000413593 FAM9AQ8IZU1 332 aaPredicted RBP16.83■□□□□ 0.28
TMEM248-202ENST00000413593 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
TMEM248-202ENST00000413593 UGGT2Q9NYU1 1516 aa16.79■□□□□ 0.28
TMEM248-202ENST00000413593 DISP1Q96F81 1524 aa16.77■□□□□ 0.28
TMEM248-202ENST00000413593 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
TMEM248-202ENST00000413593 PTPRGP23470 1445 aa16.76■□□□□ 0.27
TMEM248-202ENST00000413593 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
TMEM248-202ENST00000413593 KIAA0556O60303 1618 aa16.71■□□□□ 0.27
TMEM248-202ENST00000413593 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
TMEM248-202ENST00000413593 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
TMEM248-202ENST00000413593 KIF21BO75037 1637 aa16.7■□□□□ 0.26
TMEM248-202ENST00000413593 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
TMEM248-202ENST00000413593 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
TMEM248-202ENST00000413593 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
TMEM248-202ENST00000413593 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
TMEM248-202ENST00000413593 UHRF1BP1LA0JNW5 1464 aa16.63■□□□□ 0.25
TMEM248-202ENST00000413593 ABCC2Q92887 1545 aa16.61■□□□□ 0.25
TMEM248-202ENST00000413593 EHMT2Q96KQ7 1210 aa16.61■□□□□ 0.25
TMEM248-202ENST00000413593 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
TMEM248-202ENST00000413593 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
TMEM248-202ENST00000413593 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
TMEM248-202ENST00000413593 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
TMEM248-202ENST00000413593 PLB1Q6P1J6 1458 aa16.57■□□□□ 0.24
TMEM248-202ENST00000413593 RANGAP1P46060 587 aaPredicted RBP16.57■□□□□ 0.24
TMEM248-202ENST00000413593 FOXD1Q16676 465 aa16.56■□□□□ 0.24
TMEM248-202ENST00000413593 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
TMEM248-202ENST00000413593 ABCA8O94911 1581 aa16.54■□□□□ 0.24
TMEM248-202ENST00000413593 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
TMEM248-202ENST00000413593 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
TMEM248-202ENST00000413593 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
TMEM248-202ENST00000413593 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
TMEM248-202ENST00000413593 FHOD3Q2V2M9 1422 aa16.51■□□□□ 0.23
TMEM248-202ENST00000413593 ASXL2Q76L83 1435 aa16.51■□□□□ 0.23
TMEM248-202ENST00000413593 DIP2BQ9P265 1576 aa16.48■□□□□ 0.23
TMEM248-202ENST00000413593 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
TMEM248-202ENST00000413593 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
TMEM248-202ENST00000413593 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
TMEM248-202ENST00000413593 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
TMEM248-202ENST00000413593 ARID3CA6NKF2 412 aa16.42■□□□□ 0.22
TMEM248-202ENST00000413593 ATP10BO94823 1461 aa16.42■□□□□ 0.22
TMEM248-202ENST00000413593 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
TMEM248-202ENST00000413593 EPRSP07814 1512 aaKnown RBP16.41■□□□□ 0.22
TMEM248-202ENST00000413593 NUP153P49790 1475 aaKnown RBP16.41■□□□□ 0.22
TMEM248-202ENST00000413593 GLI2P10070 1586 aa16.39■□□□□ 0.21
TMEM248-202ENST00000413593 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
TMEM248-202ENST00000413593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
TMEM248-202ENST00000413593 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
TMEM248-202ENST00000413593 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
TMEM248-202ENST00000413593 CLIP1P30622 1438 aa16.34■□□□□ 0.21
TMEM248-202ENST00000413593 MAP3K4Q9Y6R4 1608 aa16.29■□□□□ 0.2
TMEM248-202ENST00000413593 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
TMEM248-202ENST00000413593 LOC105371045A0A1W2PR82 267 aa16.27■□□□□ 0.2
TMEM248-202ENST00000413593 ATP1B4Q9UN42 357 aaPredicted RBP16.27■□□□□ 0.2
TMEM248-202ENST00000413593 PPRC1Q5VV67 1664 aaKnown RBP16.27■□□□□ 0.19
TMEM248-202ENST00000413593 CD109Q6YHK3 1445 aa16.27■□□□□ 0.19
TMEM248-202ENST00000413593 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
TMEM248-202ENST00000413593 PLEKHD1A6NEE1 506 aa16.26■□□□□ 0.19
TMEM248-202ENST00000413593 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
TMEM248-202ENST00000413593 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
TMEM248-202ENST00000413593 TEX14Q8IWB6 1497 aa16.25■□□□□ 0.19
TMEM248-202ENST00000413593 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
TMEM248-202ENST00000413593 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
TMEM248-202ENST00000413593 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
TMEM248-202ENST00000413593 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
TMEM248-202ENST00000413593 KDM6BO15054 1643 aa16.22■□□□□ 0.19
TMEM248-202ENST00000413593 ABCA9Q8IUA7 1624 aa16.21■□□□□ 0.19
TMEM248-202ENST00000413593 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
TMEM248-202ENST00000413593 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
TMEM248-202ENST00000413593 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
TMEM248-202ENST00000413593 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
TMEM248-202ENST00000413593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.15■□□□□ 0.18
TMEM248-202ENST00000413593 TROQ12816 1431 aaPredicted RBP16.15■□□□□ 0.18
TMEM248-202ENST00000413593 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
TMEM248-202ENST00000413593 TTC37Q6PGP7 1564 aa16.12■□□□□ 0.17
TMEM248-202ENST00000413593 PHLDB1Q86UU1 1377 aa16.12■□□□□ 0.17
TMEM248-202ENST00000413593 NEO1Q92859 1461 aa16.11■□□□□ 0.17
TMEM248-202ENST00000413593 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
TMEM248-202ENST00000413593 PLCH2O75038 1416 aa16.08■□□□□ 0.16
TMEM248-202ENST00000413593 KIF14Q15058 1648 aa16.08■□□□□ 0.16
TMEM248-202ENST00000413593 FANCAO15360 1455 aa16.07■□□□□ 0.16
TMEM248-202ENST00000413593 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
TMEM248-202ENST00000413593 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
TMEM248-202ENST00000413593 RAPGEF3O95398 923 aa16.03■□□□□ 0.16
TMEM248-202ENST00000413593 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
TMEM248-202ENST00000413593 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
TMEM248-202ENST00000413593 EFCAB2Q5VUJ9 269 aa16.01■□□□□ 0.15
TMEM248-202ENST00000413593 DENND4BO75064 1496 aaPredicted RBP16■□□□□ 0.15
TMEM248-202ENST00000413593 MYO5CQ9NQX4 1742 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms