RNA–Protein interactions for RNA: ENST00000413465.6

TP53-203, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,018 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-203ENST00000413465 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
TP53-203ENST00000413465 NUP160Q12769 1436 aa18.86■□□□□ 0.61
TP53-203ENST00000413465 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
TP53-203ENST00000413465 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
TP53-203ENST00000413465 IGF1RP08069 1367 aa18.79■□□□□ 0.6
TP53-203ENST00000413465 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
TP53-203ENST00000413465 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
TP53-203ENST00000413465 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
TP53-203ENST00000413465 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
TP53-203ENST00000413465 KIAA0586Q9BVV6 1533 aa18.66■□□□□ 0.58
TP53-203ENST00000413465 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.58
TP53-203ENST00000413465 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
TP53-203ENST00000413465 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
TP53-203ENST00000413465 JPH4Q96JJ6 628 aa18.6■□□□□ 0.57
TP53-203ENST00000413465 IQGAP2Q13576 1575 aa18.58■□□□□ 0.56
TP53-203ENST00000413465 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
TP53-203ENST00000413465 CTTNBP2Q8WZ74 1663 aa18.54■□□□□ 0.56
TP53-203ENST00000413465 EEA1Q15075 1411 aa18.52■□□□□ 0.56
TP53-203ENST00000413465 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
TP53-203ENST00000413465 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
TP53-203ENST00000413465 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
TP53-203ENST00000413465 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
TP53-203ENST00000413465 UGGT2Q9NYU1 1516 aa18.45■□□□□ 0.54
TP53-203ENST00000413465 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
TP53-203ENST00000413465 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
TP53-203ENST00000413465 KIAA0556O60303 1618 aa18.39■□□□□ 0.53
TP53-203ENST00000413465 ADCY10Q96PN6 1610 aa18.39■□□□□ 0.53
TP53-203ENST00000413465 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
TP53-203ENST00000413465 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
TP53-203ENST00000413465 PTPRGP23470 1445 aa18.38■□□□□ 0.53
TP53-203ENST00000413465 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
TP53-203ENST00000413465 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
TP53-203ENST00000413465 KIF21BO75037 1637 aa18.35■□□□□ 0.53
TP53-203ENST00000413465 MAPKBP1O60336 1514 aa18.33■□□□□ 0.53
TP53-203ENST00000413465 NPM1P06748 294 aaKnown RBP eCLIP18.32■□□□□ 0.52
TP53-203ENST00000413465 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
TP53-203ENST00000413465 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
TP53-203ENST00000413465 ABCC2Q92887 1545 aa18.28■□□□□ 0.52
TP53-203ENST00000413465 UACAQ9BZF9 1416 aa18.26■□□□□ 0.51
TP53-203ENST00000413465 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
TP53-203ENST00000413465 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
TP53-203ENST00000413465 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
TP53-203ENST00000413465 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
TP53-203ENST00000413465 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
TP53-203ENST00000413465 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
TP53-203ENST00000413465 ABCA8O94911 1581 aa18.18■□□□□ 0.5
TP53-203ENST00000413465 ZCCHC11Q5TAX3 1644 aaKnown RBP18.18■□□□□ 0.5
TP53-203ENST00000413465 PLB1Q6P1J6 1458 aa18.17■□□□□ 0.5
TP53-203ENST00000413465 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
TP53-203ENST00000413465 ASXL2Q76L83 1435 aa18.14■□□□□ 0.49
TP53-203ENST00000413465 FAM69CQ0P6D2 419 aa18.11■□□□□ 0.49
TP53-203ENST00000413465 GLI2P10070 1586 aa18.1■□□□□ 0.49
TP53-203ENST00000413465 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
TP53-203ENST00000413465 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
TP53-203ENST00000413465 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
TP53-203ENST00000413465 TSPOAP1O95153 1857 aa18.06■□□□□ 0.48
TP53-203ENST00000413465 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
TP53-203ENST00000413465 WDR7Q9Y4E6 1490 aa18.06■□□□□ 0.48
TP53-203ENST00000413465 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
TP53-203ENST00000413465 EPRSP07814 1512 aaKnown RBP18.04■□□□□ 0.48
TP53-203ENST00000413465 MAP3K4Q9Y6R4 1608 aa18.02■□□□□ 0.48
TP53-203ENST00000413465 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
TP53-203ENST00000413465 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
TP53-203ENST00000413465 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
TP53-203ENST00000413465 ATP10BO94823 1461 aa17.98■□□□□ 0.47
TP53-203ENST00000413465 NUP153P49790 1475 aaKnown RBP17.97■□□□□ 0.47
TP53-203ENST00000413465 KDM6BO15054 1643 aa17.97■□□□□ 0.47
TP53-203ENST00000413465 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
TP53-203ENST00000413465 TEX14Q8IWB6 1497 aa17.96■□□□□ 0.47
TP53-203ENST00000413465 ARHGAP35Q9NRY4 1499 aa17.96■□□□□ 0.47
TP53-203ENST00000413465 HECW1Q76N89 1606 aa17.93■□□□□ 0.46
TP53-203ENST00000413465 ABCA9Q8IUA7 1624 aa17.89■□□□□ 0.45
TP53-203ENST00000413465 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
TP53-203ENST00000413465 ARID3CA6NKF2 412 aa17.88■□□□□ 0.45
TP53-203ENST00000413465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
TP53-203ENST00000413465 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
TP53-203ENST00000413465 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
TP53-203ENST00000413465 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
TP53-203ENST00000413465 CLIP1P30622 1438 aa17.83■□□□□ 0.45
TP53-203ENST00000413465 CDK13Q14004 1512 aaKnown RBP17.82■□□□□ 0.44
TP53-203ENST00000413465 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
TP53-203ENST00000413465 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
TP53-203ENST00000413465 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
TP53-203ENST00000413465 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
TP53-203ENST00000413465 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
TP53-203ENST00000413465 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
TP53-203ENST00000413465 FYCO1Q9BQS8 1478 aa17.77■□□□□ 0.44
TP53-203ENST00000413465 CFAP74Q9C0B2 1584 aa17.76■□□□□ 0.43
TP53-203ENST00000413465 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
TP53-203ENST00000413465 PHLDB1Q86UU1 1377 aa17.76■□□□□ 0.43
TP53-203ENST00000413465 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
TP53-203ENST00000413465 ATP1B4Q9UN42 357 aaPredicted RBP17.75■□□□□ 0.43
TP53-203ENST00000413465 NEO1Q92859 1461 aa17.75■□□□□ 0.43
TP53-203ENST00000413465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.74■□□□□ 0.43
TP53-203ENST00000413465 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
TP53-203ENST00000413465 ARAP3Q8WWN8 1544 aa17.73■□□□□ 0.43
TP53-203ENST00000413465 KIF14Q15058 1648 aa17.73■□□□□ 0.43
TP53-203ENST00000413465 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
TP53-203ENST00000413465 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
TP53-203ENST00000413465 MYO5CQ9NQX4 1742 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms