RNA–Protein interactions for RNA: ENST00000413465.6

TP53-203, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,018 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-203ENST00000413465 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
TP53-203ENST00000413465 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
TP53-203ENST00000413465 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
TP53-203ENST00000413465 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
TP53-203ENST00000413465 ABCC9O60706 1549 aa23.52■■□□□ 1.36
TP53-203ENST00000413465 RB1CC1Q8TDY2 1594 aa22.69■■□□□ 1.22
TP53-203ENST00000413465 NACADO15069 1562 aa22.63■■□□□ 1.21
TP53-203ENST00000413465 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
TP53-203ENST00000413465 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
TP53-203ENST00000413465 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
TP53-203ENST00000413465 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
TP53-203ENST00000413465 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
TP53-203ENST00000413465 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
TP53-203ENST00000413465 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
TP53-203ENST00000413465 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
TP53-203ENST00000413465 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
TP53-203ENST00000413465 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
TP53-203ENST00000413465 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
TP53-203ENST00000413465 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
TP53-203ENST00000413465 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
TP53-203ENST00000413465 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
TP53-203ENST00000413465 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
TP53-203ENST00000413465 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
TP53-203ENST00000413465 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
TP53-203ENST00000413465 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
TP53-203ENST00000413465 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
TP53-203ENST00000413465 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
TP53-203ENST00000413465 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
TP53-203ENST00000413465 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
TP53-203ENST00000413465 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
TP53-203ENST00000413465 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
TP53-203ENST00000413465 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
TP53-203ENST00000413465 WIZO95785 1651 aa20.51■□□□□ 0.87
TP53-203ENST00000413465 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
TP53-203ENST00000413465 LAMC3Q9Y6N6 1575 aa20.36■□□□□ 0.85
TP53-203ENST00000413465 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
TP53-203ENST00000413465 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
TP53-203ENST00000413465 NESP48681 1621 aa20.31■□□□□ 0.84
TP53-203ENST00000413465 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.82
TP53-203ENST00000413465 CUX2O14529 1486 aa20.19■□□□□ 0.82
TP53-203ENST00000413465 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
TP53-203ENST00000413465 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
TP53-203ENST00000413465 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
TP53-203ENST00000413465 CFTRP13569 1480 aa20.07■□□□□ 0.8
TP53-203ENST00000413465 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
TP53-203ENST00000413465 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
TP53-203ENST00000413465 CEP164Q9UPV0 1460 aa20■□□□□ 0.79
TP53-203ENST00000413465 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
TP53-203ENST00000413465 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
TP53-203ENST00000413465 WDR62O43379 1518 aa19.94■□□□□ 0.78
TP53-203ENST00000413465 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
TP53-203ENST00000413465 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
TP53-203ENST00000413465 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
TP53-203ENST00000413465 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
TP53-203ENST00000413465 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
TP53-203ENST00000413465 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
TP53-203ENST00000413465 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
TP53-203ENST00000413465 ADRA2BP18089 450 aa19.57■□□□□ 0.72
TP53-203ENST00000413465 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
TP53-203ENST00000413465 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
TP53-203ENST00000413465 CUX1P39880 1505 aa19.46■□□□□ 0.71
TP53-203ENST00000413465 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
TP53-203ENST00000413465 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
TP53-203ENST00000413465 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
TP53-203ENST00000413465 WDR97A6NE52 1622 aa19.41■□□□□ 0.7
TP53-203ENST00000413465 SOGA1O94964 1423 aa19.36■□□□□ 0.69
TP53-203ENST00000413465 PPP6R1Q9UPN7 881 aa19.36■□□□□ 0.69
TP53-203ENST00000413465 FOXD1Q16676 465 aa19.35■□□□□ 0.69
TP53-203ENST00000413465 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
TP53-203ENST00000413465 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.69
TP53-203ENST00000413465 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
TP53-203ENST00000413465 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.688e-7■■■□□ 16.1
TP53-203ENST00000413465 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
TP53-203ENST00000413465 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
TP53-203ENST00000413465 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
TP53-203ENST00000413465 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
TP53-203ENST00000413465 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
TP53-203ENST00000413465 CHD1O14646 1710 aa19.22■□□□□ 0.67
TP53-203ENST00000413465 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
TP53-203ENST00000413465 KCNA4P22459 653 aa19.22■□□□□ 0.67
TP53-203ENST00000413465 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
TP53-203ENST00000413465 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
TP53-203ENST00000413465 MAGI1Q96QZ7 1491 aaPredicted RBP19.19■□□□□ 0.66
TP53-203ENST00000413465 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
TP53-203ENST00000413465 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
TP53-203ENST00000413465 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
TP53-203ENST00000413465 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
TP53-203ENST00000413465 FBLN2P98095 1184 aa19.07■□□□□ 0.64
TP53-203ENST00000413465 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
TP53-203ENST00000413465 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
TP53-203ENST00000413465 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
TP53-203ENST00000413465 RIMBP3CA6NJZ7 1639 aa19.01■□□□□ 0.63
TP53-203ENST00000413465 RIMBP3BA6NNM3 1639 aa19.01■□□□□ 0.63
TP53-203ENST00000413465 RIMBP3Q9UFD9 1639 aa19.01■□□□□ 0.63
TP53-203ENST00000413465 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
TP53-203ENST00000413465 ARHGEF11O15085 1522 aa18.99■□□□□ 0.63
TP53-203ENST00000413465 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
TP53-203ENST00000413465 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
TP53-203ENST00000413465 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
TP53-203ENST00000413465 CUL7Q14999 1698 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms