RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
COPS7B-210ENST00000413197 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
COPS7B-210ENST00000413197 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■■■■■ 29.8
COPS7B-210ENST00000413197 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
COPS7B-210ENST00000413197 IGF1RP08069 1367 aa20.43■□□□□ 0.86
COPS7B-210ENST00000413197 CLIP1P30622 1438 aa20.42■□□□□ 0.86
COPS7B-210ENST00000413197 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
COPS7B-210ENST00000413197 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
COPS7B-210ENST00000413197 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
COPS7B-210ENST00000413197 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.85
COPS7B-210ENST00000413197 GAPVD1Q14C86 1478 aa20.38■□□□□ 0.85
COPS7B-210ENST00000413197 RAPGEF2Q9Y4G8 1499 aa20.37■□□□□ 0.85
COPS7B-210ENST00000413197 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
COPS7B-210ENST00000413197 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
COPS7B-210ENST00000413197 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
COPS7B-210ENST00000413197 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
COPS7B-210ENST00000413197 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
COPS7B-210ENST00000413197 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
COPS7B-210ENST00000413197 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
COPS7B-210ENST00000413197 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
COPS7B-210ENST00000413197 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
COPS7B-210ENST00000413197 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
COPS7B-210ENST00000413197 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
COPS7B-210ENST00000413197 RTN4Q9NQC3 1192 aaKnown RBP20.19■□□□□ 0.82
COPS7B-210ENST00000413197 DHX57Q6P158 1386 aaKnown RBP20.19■□□□□ 0.82
COPS7B-210ENST00000413197 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
COPS7B-210ENST00000413197 ADAMTS12P58397 1594 aa20.15■□□□□ 0.82
COPS7B-210ENST00000413197 CUL7Q14999 1698 aa20.15■□□□□ 0.82
COPS7B-210ENST00000413197 FBLN2P98095 1184 aa20.13■□□□□ 0.81
COPS7B-210ENST00000413197 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
COPS7B-210ENST00000413197 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.8
COPS7B-210ENST00000413197 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
COPS7B-210ENST00000413197 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
COPS7B-210ENST00000413197 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
COPS7B-210ENST00000413197 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
COPS7B-210ENST00000413197 SYNJ2O15056 1496 aa20.02■□□□□ 0.8
COPS7B-210ENST00000413197 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
COPS7B-210ENST00000413197 ARXQ96QS3 562 aa20.02■□□□□ 0.79
COPS7B-210ENST00000413197 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
COPS7B-210ENST00000413197 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
COPS7B-210ENST00000413197 CHD1O14646 1710 aa19.95■□□□□ 0.78
COPS7B-210ENST00000413197 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
COPS7B-210ENST00000413197 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
COPS7B-210ENST00000413197 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
COPS7B-210ENST00000413197 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
COPS7B-210ENST00000413197 TSHZ2Q9NRE2 1034 aa19.88■□□□□ 0.77
COPS7B-210ENST00000413197 NUP160Q12769 1436 aa19.87■□□□□ 0.77
COPS7B-210ENST00000413197 IQGAP2Q13576 1575 aa19.84■□□□□ 0.77
COPS7B-210ENST00000413197 KIAA0586Q9BVV6 1533 aa19.83■□□□□ 0.76
COPS7B-210ENST00000413197 FHOD3Q2V2M9 1422 aa19.82■□□□□ 0.76
COPS7B-210ENST00000413197 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
COPS7B-210ENST00000413197 JPH4Q96JJ6 628 aa19.76■□□□□ 0.75
COPS7B-210ENST00000413197 RAB3GAP2Q9H2M9 1393 aa19.75■□□□□ 0.75
COPS7B-210ENST00000413197 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
COPS7B-210ENST00000413197 SAMD9Q5K651 1589 aa19.74■□□□□ 0.75
COPS7B-210ENST00000413197 ANP32EQ9BTT0 268 aa19.74■□□□□ 0.75
COPS7B-210ENST00000413197 MAP3K1Q13233 1512 aa19.74■□□□□ 0.75
COPS7B-210ENST00000413197 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
COPS7B-210ENST00000413197 TIMELESSQ9UNS1 1208 aa19.72■□□□□ 0.75
COPS7B-210ENST00000413197 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
COPS7B-210ENST00000413197 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
COPS7B-210ENST00000413197 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
COPS7B-210ENST00000413197 TIAM1Q13009 1591 aa19.68■□□□□ 0.74
COPS7B-210ENST00000413197 EFCAB5A4FU69 1503 aa19.68■□□□□ 0.74
COPS7B-210ENST00000413197 PLEKHG5O94827 1062 aa19.67■□□□□ 0.74
COPS7B-210ENST00000413197 KIAA0556O60303 1618 aa19.67■□□□□ 0.74
COPS7B-210ENST00000413197 SETD5Q9C0A6 1442 aa19.66■□□□□ 0.74
COPS7B-210ENST00000413197 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
COPS7B-210ENST00000413197 ITGAEP38570 1179 aa19.65■□□□□ 0.74
COPS7B-210ENST00000413197 OSCARQ8IYS5 282 aa19.64■□□□□ 0.74
COPS7B-210ENST00000413197 ATP1B4Q9UN42 357 aaPredicted RBP19.63■□□□□ 0.73
COPS7B-210ENST00000413197 ARID3CA6NKF2 412 aa19.62■□□□□ 0.73
COPS7B-210ENST00000413197 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
COPS7B-210ENST00000413197 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
COPS7B-210ENST00000413197 LRRC9Q6ZRR7 1453 aa19.61■□□□□ 0.73
COPS7B-210ENST00000413197 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
COPS7B-210ENST00000413197 KLHL34Q8N239 644 aa19.57■□□□□ 0.72
COPS7B-210ENST00000413197 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
COPS7B-210ENST00000413197 FKBP8Q14318 412 aa19.57■□□□□ 0.72
COPS7B-210ENST00000413197 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
COPS7B-210ENST00000413197 PLB1Q6P1J6 1458 aa19.55■□□□□ 0.72
COPS7B-210ENST00000413197 CARMIL2Q6F5E8 1435 aa19.54■□□□□ 0.72
COPS7B-210ENST00000413197 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
COPS7B-210ENST00000413197 BCANQ96GW7 911 aa19.53■□□□□ 0.72
COPS7B-210ENST00000413197 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
COPS7B-210ENST00000413197 FMN1Q68DA7 1419 aa19.53■□□□□ 0.72
COPS7B-210ENST00000413197 LRRIQ1Q96JM4 1722 aa19.52■□□□□ 0.72
COPS7B-210ENST00000413197 AMER1Q5JTC6 1135 aaPredicted RBP19.52■□□□□ 0.71
COPS7B-210ENST00000413197 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
COPS7B-210ENST00000413197 CASKIN1Q8WXD9 1431 aa19.5■□□□□ 0.71
COPS7B-210ENST00000413197 PTPRGP23470 1445 aa19.47■□□□□ 0.71
COPS7B-210ENST00000413197 FYCO1Q9BQS8 1478 aa19.47■□□□□ 0.71
COPS7B-210ENST00000413197 NEFLP07196 543 aa19.45■□□□□ 0.7
COPS7B-210ENST00000413197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.45■□□□□ 0.73e-6■■■■□ 26.4
COPS7B-210ENST00000413197 CDK13Q14004 1512 aaKnown RBP19.45■□□□□ 0.7
COPS7B-210ENST00000413197 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
COPS7B-210ENST00000413197 RBM19Q9Y4C8 960 aaKnown RBP19.44■□□□□ 0.7
COPS7B-210ENST00000413197 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
COPS7B-210ENST00000413197 ANP32CO43423 234 aa19.42■□□□□ 0.7
COPS7B-210ENST00000413197 RAPGEF6Q8TEU7 1601 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms