RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 NISCHQ9Y2I1 1504 aa28.94■■■□□ 2.22
COPS7B-210ENST00000413197 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
COPS7B-210ENST00000413197 ABCC9O60706 1549 aa24.4■■□□□ 1.5
COPS7B-210ENST00000413197 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
COPS7B-210ENST00000413197 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.46
COPS7B-210ENST00000413197 DCAF1Q9Y4B6 1507 aa23.78■■□□□ 1.4
COPS7B-210ENST00000413197 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
COPS7B-210ENST00000413197 NACADO15069 1562 aa23.59■■□□□ 1.37
COPS7B-210ENST00000413197 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
COPS7B-210ENST00000413197 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
COPS7B-210ENST00000413197 SCRIBQ14160 1630 aa23.39■■□□□ 1.33
COPS7B-210ENST00000413197 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
COPS7B-210ENST00000413197 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
COPS7B-210ENST00000413197 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.29
COPS7B-210ENST00000413197 HRCP23327 699 aa23.09■■□□□ 1.29
COPS7B-210ENST00000413197 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
COPS7B-210ENST00000413197 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
COPS7B-210ENST00000413197 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
COPS7B-210ENST00000413197 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
COPS7B-210ENST00000413197 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
COPS7B-210ENST00000413197 MYT1Q01538 1121 aa22.55■■□□□ 1.2
COPS7B-210ENST00000413197 PPARGC1BQ86YN6 1023 aaKnown RBP22.46■■□□□ 1.19
COPS7B-210ENST00000413197 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
COPS7B-210ENST00000413197 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
COPS7B-210ENST00000413197 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
COPS7B-210ENST00000413197 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
COPS7B-210ENST00000413197 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
COPS7B-210ENST00000413197 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
COPS7B-210ENST00000413197 WIZO95785 1651 aa22.24■■□□□ 1.15
COPS7B-210ENST00000413197 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
COPS7B-210ENST00000413197 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.14
COPS7B-210ENST00000413197 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
COPS7B-210ENST00000413197 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
COPS7B-210ENST00000413197 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
COPS7B-210ENST00000413197 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
COPS7B-210ENST00000413197 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
COPS7B-210ENST00000413197 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
COPS7B-210ENST00000413197 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
COPS7B-210ENST00000413197 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
COPS7B-210ENST00000413197 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
COPS7B-210ENST00000413197 NCAPD3P42695 1498 aa21.84■■□□□ 1.09
COPS7B-210ENST00000413197 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
COPS7B-210ENST00000413197 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
COPS7B-210ENST00000413197 PRKCSHP14314 528 aaPredicted RBP21.74■■□□□ 1.07
COPS7B-210ENST00000413197 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
COPS7B-210ENST00000413197 DAXXQ9UER7 740 aaPredicted RBP21.63■■□□□ 1.05
COPS7B-210ENST00000413197 APLP2Q06481 763 aa21.59■■□□□ 1.05
COPS7B-210ENST00000413197 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
COPS7B-210ENST00000413197 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
COPS7B-210ENST00000413197 ERICH6Q7L0X2 663 aa21.44■■□□□ 1.02
COPS7B-210ENST00000413197 NESP48681 1621 aa21.37■■□□□ 1.01
COPS7B-210ENST00000413197 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
COPS7B-210ENST00000413197 CFTRP13569 1480 aa21.31■■□□□ 1
COPS7B-210ENST00000413197 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
COPS7B-210ENST00000413197 ABCC8Q09428 1581 aa21.29■■□□□ 1
COPS7B-210ENST00000413197 ACIN1Q9UKV3 1341 aaKnown RBP21.19■□□□□ 0.98
COPS7B-210ENST00000413197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.16■□□□□ 0.98
COPS7B-210ENST00000413197 CCER1Q8TC90 406 aaPredicted RBP21.14■□□□□ 0.97
COPS7B-210ENST00000413197 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
COPS7B-210ENST00000413197 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
COPS7B-210ENST00000413197 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.97
COPS7B-210ENST00000413197 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.97
COPS7B-210ENST00000413197 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
COPS7B-210ENST00000413197 SYNJ1O43426 1573 aa21.05■□□□□ 0.96
COPS7B-210ENST00000413197 DIEXFQ68CQ4 756 aaKnown RBP21.02■□□□□ 0.95
COPS7B-210ENST00000413197 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
COPS7B-210ENST00000413197 CUX1P39880 1505 aa20.98■□□□□ 0.95
COPS7B-210ENST00000413197 CENPBP07199 599 aaPredicted RBP20.97■□□□□ 0.95
COPS7B-210ENST00000413197 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
COPS7B-210ENST00000413197 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
COPS7B-210ENST00000413197 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
COPS7B-210ENST00000413197 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
COPS7B-210ENST00000413197 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.93
COPS7B-210ENST00000413197 TOP2BQ02880 1626 aa20.87■□□□□ 0.93
COPS7B-210ENST00000413197 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
COPS7B-210ENST00000413197 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
COPS7B-210ENST00000413197 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
COPS7B-210ENST00000413197 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
COPS7B-210ENST00000413197 SOGA1O94964 1423 aa20.82■□□□□ 0.92
COPS7B-210ENST00000413197 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
COPS7B-210ENST00000413197 EEA1Q15075 1411 aa20.8■□□□□ 0.92
COPS7B-210ENST00000413197 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
COPS7B-210ENST00000413197 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
COPS7B-210ENST00000413197 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
COPS7B-210ENST00000413197 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
COPS7B-210ENST00000413197 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
COPS7B-210ENST00000413197 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
COPS7B-210ENST00000413197 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
COPS7B-210ENST00000413197 CSRNP3Q8WYN3 585 aa20.69■□□□□ 0.9
COPS7B-210ENST00000413197 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
COPS7B-210ENST00000413197 WDR62O43379 1518 aa20.65■□□□□ 0.9
COPS7B-210ENST00000413197 CUX2O14529 1486 aa20.62■□□□□ 0.89
COPS7B-210ENST00000413197 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.89
COPS7B-210ENST00000413197 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
COPS7B-210ENST00000413197 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
COPS7B-210ENST00000413197 TARBP1Q13395 1621 aaKnown RBP20.54■□□□□ 0.88
COPS7B-210ENST00000413197 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.87
COPS7B-210ENST00000413197 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
COPS7B-210ENST00000413197 MIER1Q8N108 512 aa20.5■□□□□ 0.87
COPS7B-210ENST00000413197 KIF21BO75037 1637 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms