RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
PBRM1-209ENST00000412587 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
PBRM1-209ENST00000412587 TONSLQ96HA7 1378 aa11.48□□□□□ -0.57
PBRM1-209ENST00000412587 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
PBRM1-209ENST00000412587 UBE2Q2Q8WVN8 375 aa11.47□□□□□ -0.57
PBRM1-209ENST00000412587 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
PBRM1-209ENST00000412587 ERCC6Q03468 1493 aa11.46□□□□□ -0.58
PBRM1-209ENST00000412587 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
PBRM1-209ENST00000412587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■■□□ 19.2
PBRM1-209ENST00000412587 PLEKHD1A6NEE1 506 aa11.43□□□□□ -0.58
PBRM1-209ENST00000412587 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
PBRM1-209ENST00000412587 TNNT2P45379 298 aaPredicted RBP11.42□□□□□ -0.58
PBRM1-209ENST00000412587 VSIG10Q8N0Z9 540 aa11.42□□□□□ -0.58
PBRM1-209ENST00000412587 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
PBRM1-209ENST00000412587 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
PBRM1-209ENST00000412587 CEP162Q5TB80 1403 aa11.42□□□□□ -0.58
PBRM1-209ENST00000412587 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
PBRM1-209ENST00000412587 NAP1L5Q96NT1 182 aaPredicted RBP11.41□□□□□ -0.58
PBRM1-209ENST00000412587 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
PBRM1-209ENST00000412587 NCLP19338 710 aaKnown RBP11.39□□□□□ -0.59
PBRM1-209ENST00000412587 CEP164Q9UPV0 1460 aa11.39□□□□□ -0.59
PBRM1-209ENST00000412587 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
PBRM1-209ENST00000412587 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
PBRM1-209ENST00000412587 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
PBRM1-209ENST00000412587 HSP90AA1P07900 732 aaKnown RBP11.35□□□□□ -0.59
PBRM1-209ENST00000412587 ANP32BQ92688 251 aaKnown RBP11.34□□□□□ -0.59
PBRM1-209ENST00000412587 FANCIQ9NVI1 1328 aa11.34□□□□□ -0.59
PBRM1-209ENST00000412587 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
PBRM1-209ENST00000412587 CUX2O14529 1486 aa11.33□□□□□ -0.6
PBRM1-209ENST00000412587 CFDP1Q9UEE9 299 aaPredicted RBP11.33□□□□□ -0.6
PBRM1-209ENST00000412587 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
PBRM1-209ENST00000412587 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
PBRM1-209ENST00000412587 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
PBRM1-209ENST00000412587 CARMIL1Q5VZK9 1371 aa11.32□□□□□ -0.6
PBRM1-209ENST00000412587 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
PBRM1-209ENST00000412587 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
PBRM1-209ENST00000412587 HSP90AA2PQ14568 343 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-209ENST00000412587 HNRNPUQ00839 825 aaKnown RBP eCLIP11.3□□□□□ -0.6
PBRM1-209ENST00000412587 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
PBRM1-209ENST00000412587 CDK11BP21127 795 aaKnown RBP11.29□□□□□ -0.6
PBRM1-209ENST00000412587 SOGA1O94964 1423 aa11.28□□□□□ -0.6
PBRM1-209ENST00000412587 PPP4R2Q9NY27 417 aa11.27□□□□□ -0.61
PBRM1-209ENST00000412587 IRX6P78412 446 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-209ENST00000412587 A0A0U1RQG5 324 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-209ENST00000412587 LAS1LQ9Y4W2 734 aaKnown RBP11.25□□□□□ -0.61
PBRM1-209ENST00000412587 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
PBRM1-209ENST00000412587 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
PBRM1-209ENST00000412587 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
PBRM1-209ENST00000412587 EIF4G1Q04637 1599 aaKnown RBP11.22□□□□□ -0.61
PBRM1-209ENST00000412587 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.61
PBRM1-209ENST00000412587 TIMELESSQ9UNS1 1208 aa11.21□□□□□ -0.61
PBRM1-209ENST00000412587 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.61
PBRM1-209ENST00000412587 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.61
PBRM1-209ENST00000412587 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.62
PBRM1-209ENST00000412587 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.62
PBRM1-209ENST00000412587 RGL3Q3MIN7 710 aa11.2□□□□□ -0.62
PBRM1-209ENST00000412587 PPP1R15AO75807 674 aaPredicted RBP11.2□□□□□ -0.62
PBRM1-209ENST00000412587 TMC1Q8TDI8 760 aa11.2□□□□□ -0.62
PBRM1-209ENST00000412587 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
PBRM1-209ENST00000412587 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
PBRM1-209ENST00000412587 ARXQ96QS3 562 aa11.19□□□□□ -0.62
PBRM1-209ENST00000412587 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
PBRM1-209ENST00000412587 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
PBRM1-209ENST00000412587 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
PBRM1-209ENST00000412587 L1TD1Q5T7N2 865 aaKnown RBP11.19□□□□□ -0.62
PBRM1-209ENST00000412587 HIRIP3Q9BW71 556 aaPredicted RBP11.19□□□□□ -0.62
PBRM1-209ENST00000412587 WIZO95785 1651 aa11.18□□□□□ -0.62
PBRM1-209ENST00000412587 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
PBRM1-209ENST00000412587 IPO9Q96P70 1041 aaKnown RBP11.17□□□□□ -0.62
PBRM1-209ENST00000412587 IL27Q8NEV9 243 aa11.15□□□□□ -0.62
PBRM1-209ENST00000412587 MRS2Q9HD23 443 aa11.14□□□□□ -0.63
PBRM1-209ENST00000412587 CARMIL2Q6F5E8 1435 aa11.14□□□□□ -0.63
PBRM1-209ENST00000412587 WDR43Q15061 677 aaKnown RBP eCLIP11.13□□□□□ -0.63
PBRM1-209ENST00000412587 VPS8Q8N3P4 1428 aa11.11□□□□□ -0.63
PBRM1-209ENST00000412587 SMARCA4P51532 1647 aa11.11□□□□□ -0.63
PBRM1-209ENST00000412587 PDE4CQ08493 712 aa11.1□□□□□ -0.63
PBRM1-209ENST00000412587 C14orf37Q86TY3 774 aa11.09□□□□□ -0.63
PBRM1-209ENST00000412587 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
PBRM1-209ENST00000412587 GSE1Q14687 1217 aa11.09□□□□□ -0.63
PBRM1-209ENST00000412587 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
PBRM1-209ENST00000412587 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
PBRM1-209ENST00000412587 SIN3AQ96ST3 1273 aa11.08□□□□□ -0.64
PBRM1-209ENST00000412587 BECN1Q14457 450 aa11.08□□□□□ -0.64
PBRM1-209ENST00000412587 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
PBRM1-209ENST00000412587 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
PBRM1-209ENST00000412587 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
PBRM1-209ENST00000412587 KANK4Q5T7N3 995 aaPredicted RBP11.06□□□□□ -0.64
PBRM1-209ENST00000412587 ZMYND15Q9H091 742 aa11.04□□□□□ -0.64
PBRM1-209ENST00000412587 ARHGAP35Q9NRY4 1499 aa11.04□□□□□ -0.64
PBRM1-209ENST00000412587 RAPGEF2Q9Y4G8 1499 aa11.04□□□□□ -0.64
PBRM1-209ENST00000412587 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
PBRM1-209ENST00000412587 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
PBRM1-209ENST00000412587 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.03□□□□□ -0.64
PBRM1-209ENST00000412587 KANK1Q14678 1352 aa11.03□□□□□ -0.64
PBRM1-209ENST00000412587 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.64
PBRM1-209ENST00000412587 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.64
PBRM1-209ENST00000412587 MLECQ14165 292 aa11.02□□□□□ -0.65
PBRM1-209ENST00000412587 RRP9O43818 475 aaKnown RBP11.02□□□□□ -0.65
PBRM1-209ENST00000412587 JPH4Q96JJ6 628 aa11.02□□□□□ -0.65
PBRM1-209ENST00000412587 KNSTRNQ9Y448 316 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms