RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
PBRM1-209ENST00000412587 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.06
PBRM1-209ENST00000412587 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
PBRM1-209ENST00000412587 MYT1Q01538 1121 aa14.45□□□□□ -0.1
PBRM1-209ENST00000412587 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
PBRM1-209ENST00000412587 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
PBRM1-209ENST00000412587 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.26
PBRM1-209ENST00000412587 HRCP23327 699 aa13.33□□□□□ -0.28
PBRM1-209ENST00000412587 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
PBRM1-209ENST00000412587 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
PBRM1-209ENST00000412587 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
PBRM1-209ENST00000412587 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
PBRM1-209ENST00000412587 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
PBRM1-209ENST00000412587 APLP2Q06481 763 aa13.08□□□□□ -0.32
PBRM1-209ENST00000412587 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
PBRM1-209ENST00000412587 TRIM41Q8WV44 630 aa12.96□□□□□ -0.34
PBRM1-209ENST00000412587 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
PBRM1-209ENST00000412587 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
PBRM1-209ENST00000412587 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
PBRM1-209ENST00000412587 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
PBRM1-209ENST00000412587 ABCC9O60706 1549 aa12.72□□□□□ -0.37
PBRM1-209ENST00000412587 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
PBRM1-209ENST00000412587 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
PBRM1-209ENST00000412587 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
PBRM1-209ENST00000412587 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
PBRM1-209ENST00000412587 YTHDC1Q96MU7 727 aaKnown RBP12.62□□□□□ -0.39
PBRM1-209ENST00000412587 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
PBRM1-209ENST00000412587 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
PBRM1-209ENST00000412587 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
PBRM1-209ENST00000412587 NEFLP07196 543 aa12.48□□□□□ -0.41
PBRM1-209ENST00000412587 CHIC1Q5VXU3 224 aa12.46□□□□□ -0.41
PBRM1-209ENST00000412587 DIEXFQ68CQ4 756 aaKnown RBP12.4□□□□□ -0.42
PBRM1-209ENST00000412587 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
PBRM1-209ENST00000412587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
PBRM1-209ENST00000412587 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
PBRM1-209ENST00000412587 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
PBRM1-209ENST00000412587 NEUROD1Q13562 356 aa12.31□□□□□ -0.44
PBRM1-209ENST00000412587 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
PBRM1-209ENST00000412587 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
PBRM1-209ENST00000412587 ITGAEP38570 1179 aa12.27□□□□□ -0.45
PBRM1-209ENST00000412587 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
PBRM1-209ENST00000412587 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
PBRM1-209ENST00000412587 GLIPR1L2Q4G1C9 344 aa12.18□□□□□ -0.46
PBRM1-209ENST00000412587 ZCCHC6Q5VYS8 1495 aaKnown RBP12.16□□□□□ -0.46
PBRM1-209ENST00000412587 SCRIBQ14160 1630 aa12.13□□□□□ -0.47
PBRM1-209ENST00000412587 CCDC180Q9P1Z9 1646 aa12.12□□□□□ -0.47
PBRM1-209ENST00000412587 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
PBRM1-209ENST00000412587 FBLN2P98095 1184 aa12.07□□□□□ -0.48
PBRM1-209ENST00000412587 FAM50AQ14320 339 aaKnown RBP12.02□□□□□ -0.49
PBRM1-209ENST00000412587 BCANQ96GW7 911 aa12□□□□□ -0.49
PBRM1-209ENST00000412587 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
PBRM1-209ENST00000412587 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-209ENST00000412587 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
PBRM1-209ENST00000412587 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
PBRM1-209ENST00000412587 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.5
PBRM1-209ENST00000412587 DCAF1Q9Y4B6 1507 aa11.93□□□□□ -0.5
PBRM1-209ENST00000412587 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
PBRM1-209ENST00000412587 TRIM52Q96A61 297 aa11.91□□□□□ -0.5
PBRM1-209ENST00000412587 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
PBRM1-209ENST00000412587 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
PBRM1-209ENST00000412587 CNGB1Q14028 1251 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-209ENST00000412587 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
PBRM1-209ENST00000412587 NACADO15069 1562 aa11.82□□□□□ -0.52
PBRM1-209ENST00000412587 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
PBRM1-209ENST00000412587 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
PBRM1-209ENST00000412587 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
PBRM1-209ENST00000412587 FKBP8Q14318 412 aa11.77□□□□□ -0.52
PBRM1-209ENST00000412587 NBR1Q14596 966 aa11.76□□□□□ -0.53
PBRM1-209ENST00000412587 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
PBRM1-209ENST00000412587 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-209ENST00000412587 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-209ENST00000412587 ZNF326Q5BKZ1 582 aaKnown RBP11.72□□□□□ -0.53
PBRM1-209ENST00000412587 SUPT16HQ9Y5B9 1047 aaKnown RBP11.7□□□□□ -0.54
PBRM1-209ENST00000412587 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
PBRM1-209ENST00000412587 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
PBRM1-209ENST00000412587 MIER1Q8N108 512 aa11.66□□□□□ -0.54
PBRM1-209ENST00000412587 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
PBRM1-209ENST00000412587 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
PBRM1-209ENST00000412587 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
PBRM1-209ENST00000412587 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
PBRM1-209ENST00000412587 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-209ENST00000412587 RBM19Q9Y4C8 960 aaKnown RBP11.6□□□□□ -0.55
PBRM1-209ENST00000412587 CCDC136Q96JN2 1154 aa11.58□□□□□ -0.56
PBRM1-209ENST00000412587 PKNOX2Q96KN3 472 aa11.58□□□□□ -0.56
PBRM1-209ENST00000412587 BAZ1AQ9NRL2 1556 aaPredicted RBP11.57□□□□□ -0.56
PBRM1-209ENST00000412587 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
PBRM1-209ENST00000412587 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
PBRM1-209ENST00000412587 ANP32CO43423 234 aa11.56□□□□□ -0.56
PBRM1-209ENST00000412587 ESF1Q9H501 851 aaKnown RBP11.56□□□□□ -0.56
PBRM1-209ENST00000412587 CECR2Q9BXF3 1484 aa11.55□□□□□ -0.56
PBRM1-209ENST00000412587 PODXL2Q9NZ53 605 aa11.54□□□□□ -0.56
PBRM1-209ENST00000412587 EEA1Q15075 1411 aa11.54□□□□□ -0.56
PBRM1-209ENST00000412587 CLIP1P30622 1438 aa11.54□□□□□ -0.56
PBRM1-209ENST00000412587 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
PBRM1-209ENST00000412587 NEFMP07197 916 aa11.52□□□□□ -0.57
PBRM1-209ENST00000412587 NOP58Q9Y2X3 529 aaKnown RBP11.51□□□□□ -0.57
PBRM1-209ENST00000412587 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
PBRM1-209ENST00000412587 TSPY4P0CV99 314 aa11.5□□□□□ -0.57
PBRM1-209ENST00000412587 TSPY10P0CW01 314 aa11.5□□□□□ -0.57
PBRM1-209ENST00000412587 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms