RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
AC004009.1-201ENST00000412413 CLASP1Q7Z460 1538 aa14.66□□□□□ -0.06
AC004009.1-201ENST00000412413 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
AC004009.1-201ENST00000412413 ABCA10Q8WWZ4 1543 aa14.61□□□□□ -0.07
AC004009.1-201ENST00000412413 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
AC004009.1-201ENST00000412413 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
AC004009.1-201ENST00000412413 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
AC004009.1-201ENST00000412413 GRIN2AQ12879 1464 aa14.54□□□□□ -0.08
AC004009.1-201ENST00000412413 FHAD1B1AJZ9 1412 aa14.5□□□□□ -0.09
AC004009.1-201ENST00000412413 ERCC6L2Q5T890 1561 aa14.5□□□□□ -0.09
AC004009.1-201ENST00000412413 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
AC004009.1-201ENST00000412413 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
AC004009.1-201ENST00000412413 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
AC004009.1-201ENST00000412413 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
AC004009.1-201ENST00000412413 NUP160Q12769 1436 aa14.47□□□□□ -0.09
AC004009.1-201ENST00000412413 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
AC004009.1-201ENST00000412413 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
AC004009.1-201ENST00000412413 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
AC004009.1-201ENST00000412413 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
AC004009.1-201ENST00000412413 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
AC004009.1-201ENST00000412413 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
AC004009.1-201ENST00000412413 TTBK1Q5TCY1 1321 aaPredicted RBP14.36□□□□□ -0.11
AC004009.1-201ENST00000412413 SHROOM2Q13796 1616 aa14.33□□□□□ -0.11
AC004009.1-201ENST00000412413 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
AC004009.1-201ENST00000412413 IGF1RP08069 1367 aa14.3□□□□□ -0.12
AC004009.1-201ENST00000412413 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
AC004009.1-201ENST00000412413 RUSC2Q8N2Y8 1516 aa14.26□□□□□ -0.13
AC004009.1-201ENST00000412413 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
AC004009.1-201ENST00000412413 CARMIL1Q5VZK9 1371 aa14.22□□□□□ -0.13
AC004009.1-201ENST00000412413 ABCC10Q5T3U5 1492 aa14.2□□□□□ -0.14
AC004009.1-201ENST00000412413 PTPRGP23470 1445 aa14.2□□□□□ -0.14
AC004009.1-201ENST00000412413 ADCY10Q96PN6 1610 aa14.17□□□□□ -0.14
AC004009.1-201ENST00000412413 CUL7Q14999 1698 aa14.15□□□□□ -0.14
AC004009.1-201ENST00000412413 MAPKBP1O60336 1514 aa14.15□□□□□ -0.14
AC004009.1-201ENST00000412413 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
AC004009.1-201ENST00000412413 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
AC004009.1-201ENST00000412413 KIF13AQ9H1H9 1805 aa14.14□□□□□ -0.15
AC004009.1-201ENST00000412413 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
AC004009.1-201ENST00000412413 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
AC004009.1-201ENST00000412413 ASXL2Q76L83 1435 aa14.07□□□□□ -0.16
AC004009.1-201ENST00000412413 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
AC004009.1-201ENST00000412413 IQGAP2Q13576 1575 aa14.06□□□□□ -0.16
AC004009.1-201ENST00000412413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
AC004009.1-201ENST00000412413 UACAQ9BZF9 1416 aa14.06□□□□□ -0.16
AC004009.1-201ENST00000412413 KDM6BO15054 1643 aa14.05□□□□□ -0.16
AC004009.1-201ENST00000412413 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
AC004009.1-201ENST00000412413 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
AC004009.1-201ENST00000412413 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
AC004009.1-201ENST00000412413 PLB1Q6P1J6 1458 aa14.03□□□□□ -0.16
AC004009.1-201ENST00000412413 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
AC004009.1-201ENST00000412413 DISP1Q96F81 1524 aa14.02□□□□□ -0.16
AC004009.1-201ENST00000412413 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
AC004009.1-201ENST00000412413 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
AC004009.1-201ENST00000412413 UGGT2Q9NYU1 1516 aa13.96□□□□□ -0.17
AC004009.1-201ENST00000412413 ARID3CA6NKF2 412 aa13.96□□□□□ -0.17
AC004009.1-201ENST00000412413 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
AC004009.1-201ENST00000412413 ZBTB22O15209 634 aa13.95□□□□□ -0.18
AC004009.1-201ENST00000412413 EPRSP07814 1512 aaKnown RBP13.95□□□□□ -0.18
AC004009.1-201ENST00000412413 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
AC004009.1-201ENST00000412413 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
AC004009.1-201ENST00000412413 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
AC004009.1-201ENST00000412413 GLI2P10070 1586 aa13.92□□□□□ -0.18
AC004009.1-201ENST00000412413 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
AC004009.1-201ENST00000412413 COL17A1Q9UMD9 1497 aaPredicted RBP13.91□□□□□ -0.18
AC004009.1-201ENST00000412413 RANGAP1P46060 587 aaPredicted RBP13.89□□□□□ -0.19
AC004009.1-201ENST00000412413 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
AC004009.1-201ENST00000412413 ZCCHC11Q5TAX3 1644 aaKnown RBP13.89□□□□□ -0.19
AC004009.1-201ENST00000412413 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
AC004009.1-201ENST00000412413 TEX14Q8IWB6 1497 aa13.88□□□□□ -0.19
AC004009.1-201ENST00000412413 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
AC004009.1-201ENST00000412413 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
AC004009.1-201ENST00000412413 PPRC1Q5VV67 1664 aaKnown RBP13.87□□□□□ -0.19
AC004009.1-201ENST00000412413 CD109Q6YHK3 1445 aa13.85□□□□□ -0.19
AC004009.1-201ENST00000412413 PRXQ9BXM0 1461 aa13.85□□□□□ -0.19
AC004009.1-201ENST00000412413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
AC004009.1-201ENST00000412413 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
AC004009.1-201ENST00000412413 MAP3K4Q9Y6R4 1608 aa13.83□□□□□ -0.2
AC004009.1-201ENST00000412413 ABCA8O94911 1581 aa13.81□□□□□ -0.2
AC004009.1-201ENST00000412413 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
AC004009.1-201ENST00000412413 MYCNP04198 464 aaPredicted RBP13.78□□□□□ -0.2
AC004009.1-201ENST00000412413 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
AC004009.1-201ENST00000412413 MAGI3Q5TCQ9 1506 aa13.77□□□□□ -0.21
AC004009.1-201ENST00000412413 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
AC004009.1-201ENST00000412413 ATP10BO94823 1461 aa13.75□□□□□ -0.21
AC004009.1-201ENST00000412413 ILDR1Q86SU0 546 aaPredicted RBP13.75□□□□□ -0.21
AC004009.1-201ENST00000412413 RAPGEF3O95398 923 aa13.72□□□□□ -0.21
AC004009.1-201ENST00000412413 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
AC004009.1-201ENST00000412413 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
AC004009.1-201ENST00000412413 ARID4BQ4LE39 1312 aaPredicted RBP13.69□□□□□ -0.22
AC004009.1-201ENST00000412413 HECW2Q9P2P5 1572 aa13.67□□□□□ -0.22
AC004009.1-201ENST00000412413 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
AC004009.1-201ENST00000412413 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
AC004009.1-201ENST00000412413 ARAP3Q8WWN8 1544 aa13.65□□□□□ -0.22
AC004009.1-201ENST00000412413 EEA1Q15075 1411 aa13.64□□□□□ -0.23
AC004009.1-201ENST00000412413 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
AC004009.1-201ENST00000412413 SAMD9Q5K651 1589 aa13.64□□□□□ -0.23
AC004009.1-201ENST00000412413 NUP153P49790 1475 aaKnown RBP13.63□□□□□ -0.23
AC004009.1-201ENST00000412413 PHLDB1Q86UU1 1377 aa13.63□□□□□ -0.23
AC004009.1-201ENST00000412413 UBTFP17480 764 aaKnown RBP13.63□□□□□ -0.23
AC004009.1-201ENST00000412413 KIF21BO75037 1637 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms