RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
HDAC8-210ENST00000412342 EEA1Q15075 1411 aa22.19■■□□□ 1.14
HDAC8-210ENST00000412342 KIAA0586Q9BVV6 1533 aa22.19■■□□□ 1.14
HDAC8-210ENST00000412342 ERCC6L2Q5T890 1561 aa22.19■■□□□ 1.14
HDAC8-210ENST00000412342 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
HDAC8-210ENST00000412342 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
HDAC8-210ENST00000412342 JPH4Q96JJ6 628 aa22.09■■□□□ 1.13
HDAC8-210ENST00000412342 CTTNBP2Q8WZ74 1663 aa22.08■■□□□ 1.13
HDAC8-210ENST00000412342 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.13
HDAC8-210ENST00000412342 CYB5RLQ6IPT4 315 aa22.04■■□□□ 1.12
HDAC8-210ENST00000412342 KIF21BO75037 1637 aa22.02■■□□□ 1.12
HDAC8-210ENST00000412342 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
HDAC8-210ENST00000412342 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
HDAC8-210ENST00000412342 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
HDAC8-210ENST00000412342 KIAA0556O60303 1618 aa21.91■■□□□ 1.1
HDAC8-210ENST00000412342 CARMIL2Q6F5E8 1435 aa21.89■■□□□ 1.09
HDAC8-210ENST00000412342 TNIKQ9UKE5 1360 aa21.84■■□□□ 1.09
HDAC8-210ENST00000412342 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
HDAC8-210ENST00000412342 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
HDAC8-210ENST00000412342 ADCY10Q96PN6 1610 aa21.81■■□□□ 1.08
HDAC8-210ENST00000412342 PTPRGP23470 1445 aa21.8■■□□□ 1.08
HDAC8-210ENST00000412342 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
HDAC8-210ENST00000412342 ABCC2Q92887 1545 aa21.7■■□□□ 1.06
HDAC8-210ENST00000412342 UACAQ9BZF9 1416 aa21.69■■□□□ 1.06
HDAC8-210ENST00000412342 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
HDAC8-210ENST00000412342 EFCAB5A4FU69 1503 aa21.68■■□□□ 1.06
HDAC8-210ENST00000412342 ABCA8O94911 1581 aa21.67■■□□□ 1.06
HDAC8-210ENST00000412342 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
HDAC8-210ENST00000412342 MAPKBP1O60336 1514 aa21.65■■□□□ 1.06
HDAC8-210ENST00000412342 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
HDAC8-210ENST00000412342 PLB1Q6P1J6 1458 aa21.64■■□□□ 1.06
HDAC8-210ENST00000412342 KDM5BQ9UGL1 1544 aa21.61■■□□□ 1.05
HDAC8-210ENST00000412342 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
HDAC8-210ENST00000412342 FHOD3Q2V2M9 1422 aa21.61■■□□□ 1.05
HDAC8-210ENST00000412342 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
HDAC8-210ENST00000412342 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.05
HDAC8-210ENST00000412342 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
HDAC8-210ENST00000412342 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
HDAC8-210ENST00000412342 RAPGEF6Q8TEU7 1601 aa21.55■■□□□ 1.04
HDAC8-210ENST00000412342 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
HDAC8-210ENST00000412342 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
HDAC8-210ENST00000412342 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
HDAC8-210ENST00000412342 ABCC10Q5T3U5 1492 aa21.51■■□□□ 1.03
HDAC8-210ENST00000412342 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
HDAC8-210ENST00000412342 NUP153P49790 1475 aaKnown RBP21.47■■□□□ 1.03
HDAC8-210ENST00000412342 ATP10BO94823 1461 aa21.45■■□□□ 1.02
HDAC8-210ENST00000412342 CLIP1P30622 1438 aa21.43■■□□□ 1.02
HDAC8-210ENST00000412342 FMN1Q68DA7 1419 aa21.42■■□□□ 1.02
HDAC8-210ENST00000412342 GLI2P10070 1586 aa21.41■■□□□ 1.02
HDAC8-210ENST00000412342 WDR7Q9Y4E6 1490 aa21.4■■□□□ 1.02
HDAC8-210ENST00000412342 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.01
HDAC8-210ENST00000412342 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
HDAC8-210ENST00000412342 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
HDAC8-210ENST00000412342 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
HDAC8-210ENST00000412342 LRRIQ1Q96JM4 1722 aa21.36■■□□□ 1.01
HDAC8-210ENST00000412342 FAM69CQ0P6D2 419 aa21.36■■□□□ 1.01
HDAC8-210ENST00000412342 PCF11O94913 1555 aaKnown RBP21.35■■□□□ 1.01
HDAC8-210ENST00000412342 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
HDAC8-210ENST00000412342 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1.01
HDAC8-210ENST00000412342 PPRC1Q5VV67 1664 aaKnown RBP21.32■■□□□ 1
HDAC8-210ENST00000412342 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
HDAC8-210ENST00000412342 CASKIN1Q8WXD9 1431 aa21.3■■□□□ 1
HDAC8-210ENST00000412342 TSPOAP1O95153 1857 aa21.29■■□□□ 1
HDAC8-210ENST00000412342 CFAP43Q8NDM7 1665 aa21.27■■□□□ 1
HDAC8-210ENST00000412342 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
HDAC8-210ENST00000412342 ABCA9Q8IUA7 1624 aa21.24■□□□□ 0.99
HDAC8-210ENST00000412342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
HDAC8-210ENST00000412342 HNRNPUL2Q1KMD3 747 aaKnown RBP21.2■□□□□ 0.98
HDAC8-210ENST00000412342 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
HDAC8-210ENST00000412342 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
HDAC8-210ENST00000412342 MAGI3Q5TCQ9 1506 aa21.18■□□□□ 0.98
HDAC8-210ENST00000412342 CD109Q6YHK3 1445 aa21.16■□□□□ 0.98
HDAC8-210ENST00000412342 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
HDAC8-210ENST00000412342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.98
HDAC8-210ENST00000412342 PLEKHD1A6NEE1 506 aa21.15■□□□□ 0.98
HDAC8-210ENST00000412342 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.98
HDAC8-210ENST00000412342 TEX14Q8IWB6 1497 aa21.13■□□□□ 0.97
HDAC8-210ENST00000412342 KIF14Q15058 1648 aa21.13■□□□□ 0.97
HDAC8-210ENST00000412342 TROQ12816 1431 aaPredicted RBP21.12■□□□□ 0.97
HDAC8-210ENST00000412342 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
HDAC8-210ENST00000412342 KDM6BO15054 1643 aa21.11■□□□□ 0.97
HDAC8-210ENST00000412342 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
HDAC8-210ENST00000412342 COL17A1Q9UMD9 1497 aaPredicted RBP21.07■□□□□ 0.96
HDAC8-210ENST00000412342 MYO5CQ9NQX4 1742 aa21.03■□□□□ 0.96
HDAC8-210ENST00000412342 NEO1Q92859 1461 aa21.01■□□□□ 0.95
HDAC8-210ENST00000412342 TIAM1Q13009 1591 aa21.01■□□□□ 0.95
HDAC8-210ENST00000412342 ARAP3Q8WWN8 1544 aa21■□□□□ 0.95
HDAC8-210ENST00000412342 CFAP74Q9C0B2 1584 aa20.98■□□□□ 0.95
HDAC8-210ENST00000412342 PLCH2O75038 1416 aa20.98■□□□□ 0.95
HDAC8-210ENST00000412342 EHBP1L1Q8N3D4 1523 aa20.98■□□□□ 0.95
HDAC8-210ENST00000412342 PREX2Q70Z35 1606 aa20.96■□□□□ 0.95
HDAC8-210ENST00000412342 CDC42BPAQ5VT25 1732 aa20.96■□□□□ 0.95
HDAC8-210ENST00000412342 CDC42BPBQ9Y5S2 1711 aa20.96■□□□□ 0.95
HDAC8-210ENST00000412342 MAP3K1Q13233 1512 aa20.96■□□□□ 0.95
HDAC8-210ENST00000412342 PHLDB1Q86UU1 1377 aa20.96■□□□□ 0.95
HDAC8-210ENST00000412342 FANCAO15360 1455 aa20.95■□□□□ 0.94
HDAC8-210ENST00000412342 FRMPD1Q5SYB0 1578 aa20.93■□□□□ 0.94
HDAC8-210ENST00000412342 MTUS2Q5JR59 1369 aa20.92■□□□□ 0.94
HDAC8-210ENST00000412342 AKNAQ7Z591 1439 aa20.91■□□□□ 0.94
HDAC8-210ENST00000412342 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms