RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 CEP170Q5SW79 1584 aa32.72■■■□□ 2.83
PTPA-208ENST00000411917 FBLN2P98095 1184 aa32.71■■■□□ 2.83
PTPA-208ENST00000411917 IQGAP2Q13576 1575 aa32.65■■■□□ 2.82
PTPA-208ENST00000411917 CLASP1Q7Z460 1538 aa32.59■■■□□ 2.81
PTPA-208ENST00000411917 UGGT2Q9NYU1 1516 aa32.56■■■□□ 2.8
PTPA-208ENST00000411917 EHMT2Q96KQ7 1210 aa32.56■■■□□ 2.8
PTPA-208ENST00000411917 CEP162Q5TB80 1403 aa32.55■■■□□ 2.8
PTPA-208ENST00000411917 OSCARQ8IYS5 282 aa32.53■■■□□ 2.8
PTPA-208ENST00000411917 EFCAB5A4FU69 1503 aa32.52■■■□□ 2.8
PTPA-208ENST00000411917 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
PTPA-208ENST00000411917 CLIP1P30622 1438 aa32.48■■■□□ 2.79
PTPA-208ENST00000411917 SAMD9Q5K651 1589 aa32.45■■■□□ 2.78
PTPA-208ENST00000411917 JPH4Q96JJ6 628 aa32.42■■■□□ 2.78
PTPA-208ENST00000411917 ARHGAP35Q9NRY4 1499 aa32.39■■■□□ 2.78
PTPA-208ENST00000411917 DISP1Q96F81 1524 aa32.36■■■□□ 2.77
PTPA-208ENST00000411917 CARMIL2Q6F5E8 1435 aa32.34■■■□□ 2.77
PTPA-208ENST00000411917 KIAA0556O60303 1618 aa32.32■■■□□ 2.76
PTPA-208ENST00000411917 PRG4Q92954 1404 aaPredicted RBP32.27■■■□□ 2.76
PTPA-208ENST00000411917 ARAP1Q96P48 1450 aa32.25■■■□□ 2.75
PTPA-208ENST00000411917 FMN1Q68DA7 1419 aa32.18■■■□□ 2.74
PTPA-208ENST00000411917 FHOD3Q2V2M9 1422 aa32.17■■■□□ 2.74
PTPA-208ENST00000411917 VPS8Q8N3P4 1428 aa32.16■■■□□ 2.74
PTPA-208ENST00000411917 RANGAP1P46060 587 aaPredicted RBP32.14■■■□□ 2.74
PTPA-208ENST00000411917 ERCC6L2Q5T890 1561 aa32.06■■■□□ 2.72
PTPA-208ENST00000411917 PTPRGP23470 1445 aa32.03■■■□□ 2.72
PTPA-208ENST00000411917 P3H3Q8IVL6 736 aa32.03■■■□□ 2.72
PTPA-208ENST00000411917 CASKIN1Q8WXD9 1431 aa32.01■■■□□ 2.72
PTPA-208ENST00000411917 ARHGEF11O15085 1522 aa32■■■□□ 2.71
PTPA-208ENST00000411917 FYCO1Q9BQS8 1478 aa32■■■□□ 2.71
PTPA-208ENST00000411917 ABCA8O94911 1581 aa31.94■■■□□ 2.7
PTPA-208ENST00000411917 PCF11O94913 1555 aaKnown RBP31.9■■■□□ 2.7
PTPA-208ENST00000411917 UHRF1BP1LA0JNW5 1464 aa31.9■■■□□ 2.7
PTPA-208ENST00000411917 UACAQ9BZF9 1416 aa31.89■■■□□ 2.7
PTPA-208ENST00000411917 MAP3K1Q13233 1512 aa31.89■■■□□ 2.7
PTPA-208ENST00000411917 RAPGEF6Q8TEU7 1601 aa31.89■■■□□ 2.7
PTPA-208ENST00000411917 HECW1Q76N89 1606 aa31.88■■■□□ 2.69
PTPA-208ENST00000411917 RIMBP3CA6NJZ7 1639 aa31.86■■■□□ 2.69
PTPA-208ENST00000411917 RIMBP3BA6NNM3 1639 aa31.86■■■□□ 2.69
PTPA-208ENST00000411917 RIMBP3Q9UFD9 1639 aa31.86■■■□□ 2.69
PTPA-208ENST00000411917 PLB1Q6P1J6 1458 aa31.84■■■□□ 2.69
PTPA-208ENST00000411917 ABCC2Q92887 1545 aa31.83■■■□□ 2.69
PTPA-208ENST00000411917 CCDC18Q5T9S5 1454 aa31.82■■■□□ 2.68
PTPA-208ENST00000411917 NUP153P49790 1475 aaKnown RBP31.8■■■□□ 2.68
PTPA-208ENST00000411917 EPRSP07814 1512 aaKnown RBP31.75■■■□□ 2.67
PTPA-208ENST00000411917 TIAM1Q13009 1591 aa31.7■■■□□ 2.67
PTPA-208ENST00000411917 KDM5BQ9UGL1 1544 aa31.7■■■□□ 2.66
PTPA-208ENST00000411917 CFAP43Q8NDM7 1665 aa31.69■■■□□ 2.66
PTPA-208ENST00000411917 APLP2Q06481 763 aa31.68■■■□□ 2.66
PTPA-208ENST00000411917 ADCY10Q96PN6 1610 aa31.67■■■□□ 2.66
PTPA-208ENST00000411917 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
PTPA-208ENST00000411917 TTBK1Q5TCY1 1321 aaPredicted RBP31.65■■■□□ 2.66
PTPA-208ENST00000411917 ATP10BO94823 1461 aa31.64■■■□□ 2.66
PTPA-208ENST00000411917 LRRIQ1Q96JM4 1722 aa31.63■■■□□ 2.65
PTPA-208ENST00000411917 CDK11AQ9UQ88 783 aaPredicted RBP31.57■■■□□ 2.64
PTPA-208ENST00000411917 CDK13Q14004 1512 aaKnown RBP31.57■■■□□ 2.64
PTPA-208ENST00000411917 ATP1B4Q9UN42 357 aaPredicted RBP31.56■■■□□ 2.64
PTPA-208ENST00000411917 LRRC9Q6ZRR7 1453 aa31.56■■■□□ 2.64
PTPA-208ENST00000411917 CYB5RLQ6IPT4 315 aa31.52■■■□□ 2.64
PTPA-208ENST00000411917 EHBP1L1Q8N3D4 1523 aa31.52■■■□□ 2.64
PTPA-208ENST00000411917 ZCCHC11Q5TAX3 1644 aaKnown RBP31.52■■■□□ 2.64
PTPA-208ENST00000411917 TROQ12816 1431 aaPredicted RBP31.48■■■□□ 2.63
PTPA-208ENST00000411917 MTUS2Q5JR59 1369 aa31.45■■■□□ 2.63
PTPA-208ENST00000411917 NPM1P06748 294 aaKnown RBP eCLIP31.44■■■□□ 2.62
PTPA-208ENST00000411917 MAGI3Q5TCQ9 1506 aa31.44■■■□□ 2.62
PTPA-208ENST00000411917 PLEKHD1A6NEE1 506 aa31.43■■■□□ 2.62
PTPA-208ENST00000411917 KANK4Q5T7N3 995 aaPredicted RBP31.42■■■□□ 2.62
PTPA-208ENST00000411917 MAPKBP1O60336 1514 aa31.42■■■□□ 2.62
PTPA-208ENST00000411917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.38■■■□□ 2.61
PTPA-208ENST00000411917 HNRNPUL2Q1KMD3 747 aaKnown RBP31.38■■■□□ 2.61
PTPA-208ENST00000411917 WDR7Q9Y4E6 1490 aa31.37■■■□□ 2.61
PTPA-208ENST00000411917 ARID3CA6NKF2 412 aa31.34■■■□□ 2.61
PTPA-208ENST00000411917 ASXL2Q76L83 1435 aa31.33■■■□□ 2.61
PTPA-208ENST00000411917 SUPT6HQ7KZ85 1726 aaKnown RBP31.33■■■□□ 2.61
PTPA-208ENST00000411917 KIF14Q15058 1648 aa31.3■■■□□ 2.6
PTPA-208ENST00000411917 NCOA2Q15596 1464 aa31.27■■■□□ 2.6
PTPA-208ENST00000411917 ABCC10Q5T3U5 1492 aa31.23■■■□□ 2.59
PTPA-208ENST00000411917 PHLDB1Q86UU1 1377 aa31.16■■■□□ 2.58
PTPA-208ENST00000411917 MYOM3Q5VTT5 1437 aa31.15■■■□□ 2.58
PTPA-208ENST00000411917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.15■■■□□ 2.58
PTPA-208ENST00000411917 GLI2P10070 1586 aa31.15■■■□□ 2.58
PTPA-208ENST00000411917 MIA2Q96PC5 1412 aa31.15■■■□□ 2.58
PTPA-208ENST00000411917 ABCA9Q8IUA7 1624 aa31.14■■■□□ 2.58
PTPA-208ENST00000411917 ARAP3Q8WWN8 1544 aa31.14■■■□□ 2.57
PTPA-208ENST00000411917 CCNB3Q8WWL7 1395 aa31.12■■■□□ 2.57
PTPA-208ENST00000411917 RRBP1Q9P2E9 1410 aaKnown RBP31.12■■■□□ 2.57
PTPA-208ENST00000411917 PPARGC1BQ86YN6 1023 aaKnown RBP31.11■■■□□ 2.57
PTPA-208ENST00000411917 GPATCH8Q9UKJ3 1502 aaKnown RBP31.1■■■□□ 2.57
PTPA-208ENST00000411917 ITSN2Q9NZM3 1697 aa31.09■■■□□ 2.57
PTPA-208ENST00000411917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.08■■■□□ 2.57
PTPA-208ENST00000411917 TTC37Q6PGP7 1564 aa31.08■■■□□ 2.57
PTPA-208ENST00000411917 FGD6Q6ZV73 1430 aa31.06■■■□□ 2.56
PTPA-208ENST00000411917 DIP2BQ9P265 1576 aa31.05■■■□□ 2.56
PTPA-208ENST00000411917 KCNH8Q96L42 1107 aa31.04■■■□□ 2.56
PTPA-208ENST00000411917 PLCH2O75038 1416 aa31.04■■■□□ 2.56
PTPA-208ENST00000411917 PREX2Q70Z35 1606 aa31.03■■■□□ 2.56
PTPA-208ENST00000411917 CDC42BPAQ5VT25 1732 aa31.01■■■□□ 2.55
PTPA-208ENST00000411917 TCOF1Q13428 1488 aaKnown RBP31.01■■■□□ 2.55
PTPA-208ENST00000411917 MYO5CQ9NQX4 1742 aa30.99■■■□□ 2.55
PTPA-208ENST00000411917 MAP3K4Q9Y6R4 1608 aa30.96■■■□□ 2.55
PTPA-208ENST00000411917 TRIM26Q12899 539 aaPredicted RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms