RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
HMGN1P20-201ENST00000411849 ADAMTS12P58397 1594 aa11.05□□□□□ -0.64
HMGN1P20-201ENST00000411849 DMRT2Q9Y5R5 561 aa11.02□□□□□ -0.65
HMGN1P20-201ENST00000411849 NUP160Q12769 1436 aa11.01□□□□□ -0.65
HMGN1P20-201ENST00000411849 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
HMGN1P20-201ENST00000411849 WRNQ14191 1432 aaPredicted RBP eCLIP10.98□□□□□ -0.65
HMGN1P20-201ENST00000411849 TOP2BQ02880 1626 aa10.96□□□□□ -0.65
HMGN1P20-201ENST00000411849 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.65
HMGN1P20-201ENST00000411849 FHAD1B1AJZ9 1412 aa10.96□□□□□ -0.65
HMGN1P20-201ENST00000411849 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
HMGN1P20-201ENST00000411849 MAPKBP1O60336 1514 aa10.92□□□□□ -0.66
HMGN1P20-201ENST00000411849 DIP2BQ9P265 1576 aa10.91□□□□□ -0.66
HMGN1P20-201ENST00000411849 RUSC2Q8N2Y8 1516 aa10.91□□□□□ -0.66
HMGN1P20-201ENST00000411849 TSPOAP1O95153 1857 aa10.91□□□□□ -0.66
HMGN1P20-201ENST00000411849 KDM6BO15054 1643 aa10.91□□□□□ -0.66
HMGN1P20-201ENST00000411849 ABCC10Q5T3U5 1492 aa10.9□□□□□ -0.66
HMGN1P20-201ENST00000411849 NPM1P06748 294 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGN1P20-201ENST00000411849 ADCY10Q96PN6 1610 aa10.88□□□□□ -0.67
HMGN1P20-201ENST00000411849 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
HMGN1P20-201ENST00000411849 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
HMGN1P20-201ENST00000411849 CUL7Q14999 1698 aa10.81□□□□□ -0.68
HMGN1P20-201ENST00000411849 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
HMGN1P20-201ENST00000411849 KIAA0586Q9BVV6 1533 aa10.79□□□□□ -0.68
HMGN1P20-201ENST00000411849 SCAF1Q9H7N4 1312 aaKnown RBP10.77□□□□□ -0.69
HMGN1P20-201ENST00000411849 SUPT5HO00267 1087 aaKnown RBP10.76□□□□□ -0.69
HMGN1P20-201ENST00000411849 PPRC1Q5VV67 1664 aaKnown RBP10.76□□□□□ -0.69
HMGN1P20-201ENST00000411849 GLI2P10070 1586 aa10.74□□□□□ -0.69
HMGN1P20-201ENST00000411849 ILDR1Q86SU0 546 aaPredicted RBP10.74□□□□□ -0.69
HMGN1P20-201ENST00000411849 ABCC2Q92887 1545 aa10.73□□□□□ -0.69
HMGN1P20-201ENST00000411849 ADGRL1O94910 1474 aa10.72□□□□□ -0.69
HMGN1P20-201ENST00000411849 PTPRGP23470 1445 aa10.71□□□□□ -0.69
HMGN1P20-201ENST00000411849 PLB1Q6P1J6 1458 aa10.71□□□□□ -0.69
HMGN1P20-201ENST00000411849 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
HMGN1P20-201ENST00000411849 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
HMGN1P20-201ENST00000411849 MAP3K4Q9Y6R4 1608 aa10.69□□□□□ -0.7
HMGN1P20-201ENST00000411849 ASXL2Q76L83 1435 aa10.69□□□□□ -0.7
HMGN1P20-201ENST00000411849 IQGAP2Q13576 1575 aa10.69□□□□□ -0.7
HMGN1P20-201ENST00000411849 HECW2Q9P2P5 1572 aa10.68□□□□□ -0.7
HMGN1P20-201ENST00000411849 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
HMGN1P20-201ENST00000411849 IGF1RP08069 1367 aa10.67□□□□□ -0.7
HMGN1P20-201ENST00000411849 TNIKQ9UKE5 1360 aa10.67□□□□□ -0.7
HMGN1P20-201ENST00000411849 TEX14Q8IWB6 1497 aa10.67□□□□□ -0.7
HMGN1P20-201ENST00000411849 ZCCHC11Q5TAX3 1644 aaKnown RBP10.65□□□□□ -0.7
HMGN1P20-201ENST00000411849 TTBK1Q5TCY1 1321 aaPredicted RBP10.64□□□□□ -0.71
HMGN1P20-201ENST00000411849 UACAQ9BZF9 1416 aa10.63□□□□□ -0.71
HMGN1P20-201ENST00000411849 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
HMGN1P20-201ENST00000411849 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
HMGN1P20-201ENST00000411849 CARMIL1Q5VZK9 1371 aa10.62□□□□□ -0.71
HMGN1P20-201ENST00000411849 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
HMGN1P20-201ENST00000411849 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
HMGN1P20-201ENST00000411849 DISP1Q96F81 1524 aa10.6□□□□□ -0.71
HMGN1P20-201ENST00000411849 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
HMGN1P20-201ENST00000411849 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
HMGN1P20-201ENST00000411849 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
HMGN1P20-201ENST00000411849 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
HMGN1P20-201ENST00000411849 WDR7Q9Y4E6 1490 aa10.56□□□□□ -0.72
HMGN1P20-201ENST00000411849 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
HMGN1P20-201ENST00000411849 KIF21BO75037 1637 aa10.55□□□□□ -0.72
HMGN1P20-201ENST00000411849 RAPGEF2Q9Y4G8 1499 aa10.53□□□□□ -0.72
HMGN1P20-201ENST00000411849 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
HMGN1P20-201ENST00000411849 CD109Q6YHK3 1445 aa10.5□□□□□ -0.73
HMGN1P20-201ENST00000411849 GOLGA3Q08378 1498 aa10.49□□□□□ -0.73
HMGN1P20-201ENST00000411849 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
HMGN1P20-201ENST00000411849 ABCA8O94911 1581 aa10.48□□□□□ -0.73
HMGN1P20-201ENST00000411849 FBXO41Q8TF61 875 aa10.48□□□□□ -0.73
HMGN1P20-201ENST00000411849 ARAP3Q8WWN8 1544 aa10.47□□□□□ -0.73
HMGN1P20-201ENST00000411849 ADAMTSL3P82987 1691 aa10.47□□□□□ -0.73
HMGN1P20-201ENST00000411849 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
HMGN1P20-201ENST00000411849 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
HMGN1P20-201ENST00000411849 BCORL1Q5H9F3 1711 aa10.44□□□□□ -0.74
HMGN1P20-201ENST00000411849 RNF39Q9H2S5 420 aa10.43□□□□□ -0.74
HMGN1P20-201ENST00000411849 PTPRMP28827 1452 aa10.42□□□□□ -0.74
HMGN1P20-201ENST00000411849 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
HMGN1P20-201ENST00000411849 FAM9AQ8IZU1 332 aaPredicted RBP10.42□□□□□ -0.74
HMGN1P20-201ENST00000411849 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
HMGN1P20-201ENST00000411849 MADDQ8WXG6 1647 aa10.4□□□□□ -0.74
HMGN1P20-201ENST00000411849 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.74
HMGN1P20-201ENST00000411849 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
HMGN1P20-201ENST00000411849 RIMS1Q86UR5 1692 aaKnown RBP10.39□□□□□ -0.75
HMGN1P20-201ENST00000411849 NEO1Q92859 1461 aa10.38□□□□□ -0.75
HMGN1P20-201ENST00000411849 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
HMGN1P20-201ENST00000411849 FRMPD1Q5SYB0 1578 aa10.37□□□□□ -0.75
HMGN1P20-201ENST00000411849 RAPGEF6Q8TEU7 1601 aa10.36□□□□□ -0.75
HMGN1P20-201ENST00000411849 ATP10BO94823 1461 aa10.36□□□□□ -0.75
HMGN1P20-201ENST00000411849 LMTK3Q96Q04 1460 aa10.36□□□□□ -0.75
HMGN1P20-201ENST00000411849 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
HMGN1P20-201ENST00000411849 CFAP74Q9C0B2 1584 aa10.35□□□□□ -0.75
HMGN1P20-201ENST00000411849 ARHGEF40Q8TER5 1519 aa10.35□□□□□ -0.75
HMGN1P20-201ENST00000411849 ARID4BQ4LE39 1312 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P20-201ENST00000411849 RAPGEF3O95398 923 aa10.33□□□□□ -0.76
HMGN1P20-201ENST00000411849 PRXQ9BXM0 1461 aa10.33□□□□□ -0.76
HMGN1P20-201ENST00000411849 SAMD9Q5K651 1589 aa10.33□□□□□ -0.76
HMGN1P20-201ENST00000411849 FER1L4A9Z1Z3 1794 aa10.32□□□□□ -0.76
HMGN1P20-201ENST00000411849 ARID3CA6NKF2 412 aa10.31□□□□□ -0.76
HMGN1P20-201ENST00000411849 POGZQ7Z3K3 1410 aa10.3□□□□□ -0.76
HMGN1P20-201ENST00000411849 FANCAO15360 1455 aa10.3□□□□□ -0.76
HMGN1P20-201ENST00000411849 DENND4BO75064 1496 aaPredicted RBP10.29□□□□□ -0.76
HMGN1P20-201ENST00000411849 PREX1Q8TCU6 1659 aa10.28□□□□□ -0.76
HMGN1P20-201ENST00000411849 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
HMGN1P20-201ENST00000411849 ZMYM4Q5VZL5 1548 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms