RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
CLUHP3-202ENST00000411844 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
CLUHP3-202ENST00000411844 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
CLUHP3-202ENST00000411844 KIAA0586Q9BVV6 1533 aa18.18■□□□□ 0.5
CLUHP3-202ENST00000411844 IQGAP2Q13576 1575 aa18.18■□□□□ 0.5
CLUHP3-202ENST00000411844 SAMD9Q5K651 1589 aa18.17■□□□□ 0.5
CLUHP3-202ENST00000411844 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
CLUHP3-202ENST00000411844 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
CLUHP3-202ENST00000411844 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
CLUHP3-202ENST00000411844 UGGT2Q9NYU1 1516 aa18.14■□□□□ 0.49
CLUHP3-202ENST00000411844 NUP160Q12769 1436 aa18.14■□□□□ 0.49
CLUHP3-202ENST00000411844 APLP2Q06481 763 aa18.11■□□□□ 0.49
CLUHP3-202ENST00000411844 FMN1Q68DA7 1419 aa18.11■□□□□ 0.49
CLUHP3-202ENST00000411844 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
CLUHP3-202ENST00000411844 CEP170Q5SW79 1584 aa18.08■□□□□ 0.48
CLUHP3-202ENST00000411844 FHOD3Q2V2M9 1422 aa18.06■□□□□ 0.48
CLUHP3-202ENST00000411844 FYCO1Q9BQS8 1478 aa18.06■□□□□ 0.48
CLUHP3-202ENST00000411844 CASKIN1Q8WXD9 1431 aa18.05■□□□□ 0.48
CLUHP3-202ENST00000411844 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
CLUHP3-202ENST00000411844 FBLN2P98095 1184 aa18.01■□□□□ 0.47
CLUHP3-202ENST00000411844 PCF11O94913 1555 aaKnown RBP18■□□□□ 0.47
CLUHP3-202ENST00000411844 KIAA0556O60303 1618 aa17.99■□□□□ 0.47
CLUHP3-202ENST00000411844 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
CLUHP3-202ENST00000411844 DISP1Q96F81 1524 aa17.98■□□□□ 0.47
CLUHP3-202ENST00000411844 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
CLUHP3-202ENST00000411844 CHD1O14646 1710 aa17.97■□□□□ 0.47
CLUHP3-202ENST00000411844 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
CLUHP3-202ENST00000411844 CFAP43Q8NDM7 1665 aa17.95■□□□□ 0.46
CLUHP3-202ENST00000411844 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
CLUHP3-202ENST00000411844 JPH4Q96JJ6 628 aa17.93■□□□□ 0.46
CLUHP3-202ENST00000411844 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
CLUHP3-202ENST00000411844 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
CLUHP3-202ENST00000411844 LRRC9Q6ZRR7 1453 aa17.89■□□□□ 0.45
CLUHP3-202ENST00000411844 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
CLUHP3-202ENST00000411844 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
CLUHP3-202ENST00000411844 CLASP1Q7Z460 1538 aa17.86■□□□□ 0.45
CLUHP3-202ENST00000411844 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
CLUHP3-202ENST00000411844 RAPGEF6Q8TEU7 1601 aa17.81■□□□□ 0.44
CLUHP3-202ENST00000411844 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
CLUHP3-202ENST00000411844 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
CLUHP3-202ENST00000411844 TTBK1Q5TCY1 1321 aaPredicted RBP17.79■□□□□ 0.44
CLUHP3-202ENST00000411844 RRBP1Q9P2E9 1410 aaKnown RBP17.79■□□□□ 0.44
CLUHP3-202ENST00000411844 EHBP1L1Q8N3D4 1523 aa17.78■□□□□ 0.44
CLUHP3-202ENST00000411844 LRRIQ1Q96JM4 1722 aa17.77■□□□□ 0.44
CLUHP3-202ENST00000411844 MTUS2Q5JR59 1369 aa17.76■□□□□ 0.43
CLUHP3-202ENST00000411844 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
CLUHP3-202ENST00000411844 ABCA8O94911 1581 aa17.75■□□□□ 0.43
CLUHP3-202ENST00000411844 PTPRGP23470 1445 aa17.73■□□□□ 0.43
CLUHP3-202ENST00000411844 PLB1Q6P1J6 1458 aa17.71■□□□□ 0.43
CLUHP3-202ENST00000411844 CCNB3Q8WWL7 1395 aa17.7■□□□□ 0.42
CLUHP3-202ENST00000411844 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
CLUHP3-202ENST00000411844 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
CLUHP3-202ENST00000411844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLUHP3-202ENST00000411844 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
CLUHP3-202ENST00000411844 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
CLUHP3-202ENST00000411844 PHLDB1Q86UU1 1377 aa17.67■□□□□ 0.42
CLUHP3-202ENST00000411844 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
CLUHP3-202ENST00000411844 MAGI3Q5TCQ9 1506 aa17.67■□□□□ 0.42
CLUHP3-202ENST00000411844 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
CLUHP3-202ENST00000411844 UACAQ9BZF9 1416 aa17.65■□□□□ 0.42
CLUHP3-202ENST00000411844 MYOM3Q5VTT5 1437 aa17.63■□□□□ 0.41
CLUHP3-202ENST00000411844 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
CLUHP3-202ENST00000411844 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
CLUHP3-202ENST00000411844 TROQ12816 1431 aaPredicted RBP17.62■□□□□ 0.41
CLUHP3-202ENST00000411844 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
CLUHP3-202ENST00000411844 ATP10BO94823 1461 aa17.61■□□□□ 0.41
CLUHP3-202ENST00000411844 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
CLUHP3-202ENST00000411844 ADCY10Q96PN6 1610 aa17.58■□□□□ 0.41
CLUHP3-202ENST00000411844 MIA2Q96PC5 1412 aa17.58■□□□□ 0.41
CLUHP3-202ENST00000411844 HRCP23327 699 aa17.57■□□□□ 0.4
CLUHP3-202ENST00000411844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
CLUHP3-202ENST00000411844 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
CLUHP3-202ENST00000411844 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
CLUHP3-202ENST00000411844 TCOF1Q13428 1488 aaKnown RBP17.54■□□□□ 0.4
CLUHP3-202ENST00000411844 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
CLUHP3-202ENST00000411844 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.39
CLUHP3-202ENST00000411844 ARID3CA6NKF2 412 aa17.51■□□□□ 0.39
CLUHP3-202ENST00000411844 KIF14Q15058 1648 aa17.5■□□□□ 0.39
CLUHP3-202ENST00000411844 PTPN23Q9H3S7 1636 aa17.49■□□□□ 0.39
CLUHP3-202ENST00000411844 FAM50AQ14320 339 aaKnown RBP17.48■□□□□ 0.39
CLUHP3-202ENST00000411844 ITSN2Q9NZM3 1697 aa17.48■□□□□ 0.39
CLUHP3-202ENST00000411844 ABCC10Q5T3U5 1492 aa17.45■□□□□ 0.38
CLUHP3-202ENST00000411844 ZCCHC11Q5TAX3 1644 aaKnown RBP17.43■□□□□ 0.38
CLUHP3-202ENST00000411844 GPATCH8Q9UKJ3 1502 aaKnown RBP17.43■□□□□ 0.38
CLUHP3-202ENST00000411844 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.37
CLUHP3-202ENST00000411844 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
CLUHP3-202ENST00000411844 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
CLUHP3-202ENST00000411844 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
CLUHP3-202ENST00000411844 ITGAEP38570 1179 aa17.36■□□□□ 0.37
CLUHP3-202ENST00000411844 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
CLUHP3-202ENST00000411844 CLSPNQ9HAW4 1339 aa17.35■□□□□ 0.37
CLUHP3-202ENST00000411844 DNMT1P26358 1616 aaKnown RBP17.35■□□□□ 0.37
CLUHP3-202ENST00000411844 CAMSAP2Q08AD1 1489 aa17.34■□□□□ 0.37
CLUHP3-202ENST00000411844 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
CLUHP3-202ENST00000411844 PREX2Q70Z35 1606 aa17.33■□□□□ 0.37
CLUHP3-202ENST00000411844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.33■□□□□ 0.37
CLUHP3-202ENST00000411844 PTPRKQ15262 1439 aa17.33■□□□□ 0.36
CLUHP3-202ENST00000411844 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
CLUHP3-202ENST00000411844 WDR7Q9Y4E6 1490 aa17.32■□□□□ 0.36
CLUHP3-202ENST00000411844 DAPK1P53355 1430 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms