RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CSRNP3Q8WYN3 585 aa39.84■■■■□ 3.97
UBE2E3-202ENST00000410062 PRXQ9BXM0 1461 aa39.82■■■■□ 3.96
UBE2E3-202ENST00000410062 SHROOM2Q13796 1616 aa39.81■■■■□ 3.96
UBE2E3-202ENST00000410062 KIAA0586Q9BVV6 1533 aa39.79■■■■□ 3.96
UBE2E3-202ENST00000410062 JPH4Q96JJ6 628 aa39.76■■■■□ 3.95
UBE2E3-202ENST00000410062 ARAP1Q96P48 1450 aa39.74■■■■□ 3.95
UBE2E3-202ENST00000410062 ERCC6L2Q5T890 1561 aa39.73■■■■□ 3.95
UBE2E3-202ENST00000410062 CYB5RLQ6IPT4 315 aa39.71■■■■□ 3.95
UBE2E3-202ENST00000410062 PRG4Q92954 1404 aaPredicted RBP39.66■■■■□ 3.94
UBE2E3-202ENST00000410062 IQGAP2Q13576 1575 aa39.61■■■■□ 3.93
UBE2E3-202ENST00000410062 CTTNBP2Q8WZ74 1663 aa39.54■■■■□ 3.92
UBE2E3-202ENST00000410062 KIF21BO75037 1637 aa39.46■■■■□ 3.91
UBE2E3-202ENST00000410062 UGGT2Q9NYU1 1516 aa39.39■■■■□ 3.9
UBE2E3-202ENST00000410062 EHMT2Q96KQ7 1210 aa39.37■■■■□ 3.89
UBE2E3-202ENST00000410062 CARMIL2Q6F5E8 1435 aa39.36■■■■□ 3.89
UBE2E3-202ENST00000410062 DISP1Q96F81 1524 aa39.34■■■■□ 3.89
UBE2E3-202ENST00000410062 GOLGA3Q08378 1498 aa39.25■■■■□ 3.87
UBE2E3-202ENST00000410062 TTBK1Q5TCY1 1321 aaPredicted RBP39.24■■■■□ 3.87
UBE2E3-202ENST00000410062 TNIKQ9UKE5 1360 aa39.24■■■■□ 3.87
UBE2E3-202ENST00000410062 KIAA0556O60303 1618 aa39.23■■■■□ 3.87
UBE2E3-202ENST00000410062 PTPRGP23470 1445 aa39.2■■■■□ 3.87
UBE2E3-202ENST00000410062 UBTFP17480 764 aaKnown RBP39.19■■■■□ 3.86
UBE2E3-202ENST00000410062 RANGAP1P46060 587 aaPredicted RBP39.13■■■■□ 3.85
UBE2E3-202ENST00000410062 P3H3Q8IVL6 736 aa39.05■■■■□ 3.84
UBE2E3-202ENST00000410062 ADCY10Q96PN6 1610 aa39.04■■■■□ 3.84
UBE2E3-202ENST00000410062 SAMD9Q5K651 1589 aa39.03■■■■□ 3.84
UBE2E3-202ENST00000410062 UACAQ9BZF9 1416 aa38.94■■■■□ 3.82
UBE2E3-202ENST00000410062 NPM1P06748 294 aaKnown RBP eCLIP38.89■■■■□ 3.82
UBE2E3-202ENST00000410062 UHRF1BP1LA0JNW5 1464 aa38.87■■■■□ 3.81
UBE2E3-202ENST00000410062 EFCAB5A4FU69 1503 aa38.87■■■■□ 3.81
UBE2E3-202ENST00000410062 PLB1Q6P1J6 1458 aa38.86■■■■□ 3.81
UBE2E3-202ENST00000410062 ABCC2Q92887 1545 aa38.86■■■■□ 3.81
UBE2E3-202ENST00000410062 FHOD3Q2V2M9 1422 aa38.85■■■■□ 3.81
UBE2E3-202ENST00000410062 TRHP20396 242 aaPredicted RBP38.84■■■■□ 3.81
UBE2E3-202ENST00000410062 ABCA8O94911 1581 aa38.8■■■■□ 3.8
UBE2E3-202ENST00000410062 ARHGAP35Q9NRY4 1499 aa38.75■■■■□ 3.79
UBE2E3-202ENST00000410062 MAPKBP1O60336 1514 aa38.72■■■■□ 3.79
UBE2E3-202ENST00000410062 KDM5BQ9UGL1 1544 aa38.69■■■■□ 3.78
UBE2E3-202ENST00000410062 LOC105371045A0A1W2PR82 267 aa38.68■■■■□ 3.78
UBE2E3-202ENST00000410062 ZCCHC11Q5TAX3 1644 aaKnown RBP38.66■■■■□ 3.78
UBE2E3-202ENST00000410062 RAPGEF6Q8TEU7 1601 aa38.63■■■■□ 3.77
UBE2E3-202ENST00000410062 ARID3CA6NKF2 412 aa38.58■■■■□ 3.77
UBE2E3-202ENST00000410062 ASXL2Q76L83 1435 aa38.58■■■■□ 3.77
UBE2E3-202ENST00000410062 CLIP1P30622 1438 aa38.57■■■■□ 3.76
UBE2E3-202ENST00000410062 ABCC10Q5T3U5 1492 aa38.54■■■■□ 3.76
UBE2E3-202ENST00000410062 KIF13AQ9H1H9 1805 aa38.53■■■■□ 3.76
UBE2E3-202ENST00000410062 FMN1Q68DA7 1419 aa38.51■■■■□ 3.76
UBE2E3-202ENST00000410062 NUP153P49790 1475 aaKnown RBP38.5■■■■□ 3.75
UBE2E3-202ENST00000410062 DIP2BQ9P265 1576 aa38.49■■■■□ 3.75
UBE2E3-202ENST00000410062 ATP10BO94823 1461 aa38.49■■■■□ 3.75
UBE2E3-202ENST00000410062 FAM69CQ0P6D2 419 aa38.48■■■■□ 3.75
UBE2E3-202ENST00000410062 CEP162Q5TB80 1403 aa38.45■■■■□ 3.75
UBE2E3-202ENST00000410062 WDR7Q9Y4E6 1490 aa38.4■■■■□ 3.74
UBE2E3-202ENST00000410062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.39■■■■□ 3.74
UBE2E3-202ENST00000410062 HNRNPUL2Q1KMD3 747 aaKnown RBP38.39■■■■□ 3.74
UBE2E3-202ENST00000410062 ATP1B4Q9UN42 357 aaPredicted RBP38.38■■■■□ 3.73
UBE2E3-202ENST00000410062 EPRSP07814 1512 aaKnown RBP38.34■■■■□ 3.73
UBE2E3-202ENST00000410062 HECW1Q76N89 1606 aa38.32■■■■□ 3.72
UBE2E3-202ENST00000410062 KCNH8Q96L42 1107 aa38.29■■■■□ 3.72
UBE2E3-202ENST00000410062 GLI2P10070 1586 aa38.28■■■■□ 3.72
UBE2E3-202ENST00000410062 PCF11O94913 1555 aaKnown RBP38.28■■■■□ 3.72
UBE2E3-202ENST00000410062 CDK13Q14004 1512 aaKnown RBP38.27■■■■□ 3.72
UBE2E3-202ENST00000410062 CASKIN1Q8WXD9 1431 aa38.24■■■■□ 3.71
UBE2E3-202ENST00000410062 TSPOAP1O95153 1857 aa38.22■■■■□ 3.71
UBE2E3-202ENST00000410062 LRRIQ1Q96JM4 1722 aa38.19■■■■□ 3.7
UBE2E3-202ENST00000410062 PLEKHD1A6NEE1 506 aa38.17■■■■□ 3.7
UBE2E3-202ENST00000410062 FYCO1Q9BQS8 1478 aa38.16■■■■□ 3.7
UBE2E3-202ENST00000410062 MAP3K4Q9Y6R4 1608 aa38.14■■■■□ 3.7
UBE2E3-202ENST00000410062 PPRC1Q5VV67 1664 aaKnown RBP38.08■■■■□ 3.69
UBE2E3-202ENST00000410062 CCDC18Q5T9S5 1454 aa38.05■■■■□ 3.68
UBE2E3-202ENST00000410062 CFAP43Q8NDM7 1665 aa38.05■■■■□ 3.68
UBE2E3-202ENST00000410062 CD109Q6YHK3 1445 aa38.03■■■■□ 3.68
UBE2E3-202ENST00000410062 CDK11AQ9UQ88 783 aaPredicted RBP38.03■■■■□ 3.68
UBE2E3-202ENST00000410062 ABCA9Q8IUA7 1624 aa38.01■■■■□ 3.68
UBE2E3-202ENST00000410062 VPS8Q8N3P4 1428 aa37.95■■■■□ 3.67
UBE2E3-202ENST00000410062 TEX14Q8IWB6 1497 aa37.93■■■■□ 3.66
UBE2E3-202ENST00000410062 TROQ12816 1431 aaPredicted RBP37.92■■■■□ 3.66
UBE2E3-202ENST00000410062 MAGI3Q5TCQ9 1506 aa37.92■■■■□ 3.66
UBE2E3-202ENST00000410062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.92■■■■□ 3.66
UBE2E3-202ENST00000410062 TTC37Q6PGP7 1564 aa37.87■■■■□ 3.65
UBE2E3-202ENST00000410062 KIF14Q15058 1648 aa37.86■■■■□ 3.65
UBE2E3-202ENST00000410062 KDM6BO15054 1643 aa37.83■■■■□ 3.65
UBE2E3-202ENST00000410062 COL17A1Q9UMD9 1497 aaPredicted RBP37.73■■■■□ 3.63
UBE2E3-202ENST00000410062 MTUS2Q5JR59 1369 aa37.72■■■■□ 3.63
UBE2E3-202ENST00000410062 TIAM1Q13009 1591 aa37.69■■■■□ 3.62
UBE2E3-202ENST00000410062 MYO5CQ9NQX4 1742 aa37.68■■■■□ 3.62
UBE2E3-202ENST00000410062 PLCH2O75038 1416 aa37.67■■■■□ 3.62
UBE2E3-202ENST00000410062 NEO1Q92859 1461 aa37.66■■■■□ 3.62
UBE2E3-202ENST00000410062 FANCAO15360 1455 aa37.65■■■■□ 3.62
UBE2E3-202ENST00000410062 EHBP1L1Q8N3D4 1523 aa37.63■■■■□ 3.61
UBE2E3-202ENST00000410062 PHLDB1Q86UU1 1377 aa37.62■■■■□ 3.61
UBE2E3-202ENST00000410062 ARAP3Q8WWN8 1544 aa37.59■■■■□ 3.61
UBE2E3-202ENST00000410062 CFAP74Q9C0B2 1584 aa37.58■■■■□ 3.61
UBE2E3-202ENST00000410062 AKNAQ7Z591 1439 aa37.57■■■■□ 3.6
UBE2E3-202ENST00000410062 MAP3K1Q13233 1512 aa37.56■■■■□ 3.6
UBE2E3-202ENST00000410062 ARHGAP5Q13017 1502 aa37.55■■■■□ 3.6
UBE2E3-202ENST00000410062 CDC42BPBQ9Y5S2 1711 aa37.54■■■■□ 3.6
UBE2E3-202ENST00000410062 EFCAB2Q5VUJ9 269 aa37.53■■■■□ 3.6
UBE2E3-202ENST00000410062 CDC42BPAQ5VT25 1732 aa37.53■■■■□ 3.6
UBE2E3-202ENST00000410062 LRRC9Q6ZRR7 1453 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms