RNA–Protein interactions for RNA: ENST00000409617.5

SERF2-208, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2

Gene SERF2, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-208ENST00000409617 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
SERF2-208ENST00000409617 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
SERF2-208ENST00000409617 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
SERF2-208ENST00000409617 JPH4Q96JJ6 628 aa24.55■■□□□ 1.52
SERF2-208ENST00000409617 SHROOM2Q13796 1616 aa24.54■■□□□ 1.52
SERF2-208ENST00000409617 PRG4Q92954 1404 aaPredicted RBP24.45■■□□□ 1.51
SERF2-208ENST00000409617 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
SERF2-208ENST00000409617 IQGAP2Q13576 1575 aa24.42■■□□□ 1.5
SERF2-208ENST00000409617 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
SERF2-208ENST00000409617 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
SERF2-208ENST00000409617 KIF21BO75037 1637 aa24.41■■□□□ 1.5
SERF2-208ENST00000409617 CTTNBP2Q8WZ74 1663 aa24.36■■□□□ 1.49
SERF2-208ENST00000409617 UGGT2Q9NYU1 1516 aa24.34■■□□□ 1.49
SERF2-208ENST00000409617 CARMIL2Q6F5E8 1435 aa24.31■■□□□ 1.48
SERF2-208ENST00000409617 GOLGA3Q08378 1498 aa24.28■■□□□ 1.48
SERF2-208ENST00000409617 DISP1Q96F81 1524 aa24.27■■□□□ 1.48
SERF2-208ENST00000409617 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
SERF2-208ENST00000409617 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
SERF2-208ENST00000409617 EHMT2Q96KQ7 1210 aa24.2■■□□□ 1.46
SERF2-208ENST00000409617 PTPRGP23470 1445 aa24.19■■□□□ 1.46
SERF2-208ENST00000409617 KIAA0556O60303 1618 aa24.19■■□□□ 1.46
SERF2-208ENST00000409617 SAMD9Q5K651 1589 aa24.1■■□□□ 1.45
SERF2-208ENST00000409617 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
SERF2-208ENST00000409617 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
SERF2-208ENST00000409617 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
SERF2-208ENST00000409617 UACAQ9BZF9 1416 aa24.03■■□□□ 1.44
SERF2-208ENST00000409617 EFCAB5A4FU69 1503 aa24.03■■□□□ 1.44
SERF2-208ENST00000409617 ADCY10Q96PN6 1610 aa24.02■■□□□ 1.44
SERF2-208ENST00000409617 UHRF1BP1LA0JNW5 1464 aa24.02■■□□□ 1.44
SERF2-208ENST00000409617 NPM1P06748 294 aaKnown RBP eCLIP23.98■■□□□ 1.43
SERF2-208ENST00000409617 ABCC2Q92887 1545 aa23.96■■□□□ 1.43
SERF2-208ENST00000409617 FHOD3Q2V2M9 1422 aa23.96■■□□□ 1.43
SERF2-208ENST00000409617 PLB1Q6P1J6 1458 aa23.95■■□□□ 1.42
SERF2-208ENST00000409617 ABCA8O94911 1581 aa23.95■■□□□ 1.42
SERF2-208ENST00000409617 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
SERF2-208ENST00000409617 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
SERF2-208ENST00000409617 KDM5BQ9UGL1 1544 aa23.89■■□□□ 1.41
SERF2-208ENST00000409617 MAPKBP1O60336 1514 aa23.88■■□□□ 1.41
SERF2-208ENST00000409617 CLIP1P30622 1438 aa23.85■■□□□ 1.41
SERF2-208ENST00000409617 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
SERF2-208ENST00000409617 FMN1Q68DA7 1419 aa23.83■■□□□ 1.4
SERF2-208ENST00000409617 RAPGEF6Q8TEU7 1601 aa23.82■■□□□ 1.4
SERF2-208ENST00000409617 ZCCHC11Q5TAX3 1644 aaKnown RBP23.79■■□□□ 1.4
SERF2-208ENST00000409617 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
SERF2-208ENST00000409617 ASXL2Q76L83 1435 aa23.77■■□□□ 1.4
SERF2-208ENST00000409617 ATP10BO94823 1461 aa23.76■■□□□ 1.39
SERF2-208ENST00000409617 NUP153P49790 1475 aaKnown RBP23.76■■□□□ 1.39
SERF2-208ENST00000409617 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
SERF2-208ENST00000409617 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
SERF2-208ENST00000409617 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
SERF2-208ENST00000409617 DIP2BQ9P265 1576 aa23.68■■□□□ 1.38
SERF2-208ENST00000409617 WDR7Q9Y4E6 1490 aa23.68■■□□□ 1.38
SERF2-208ENST00000409617 CASKIN1Q8WXD9 1431 aa23.67■■□□□ 1.38
SERF2-208ENST00000409617 KIF13AQ9H1H9 1805 aa23.66■■□□□ 1.38
SERF2-208ENST00000409617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.65■■□□□ 1.38
SERF2-208ENST00000409617 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
SERF2-208ENST00000409617 HECW1Q76N89 1606 aa23.65■■□□□ 1.38
SERF2-208ENST00000409617 ATP1B4Q9UN42 357 aaPredicted RBP23.64■■□□□ 1.37
SERF2-208ENST00000409617 EPRSP07814 1512 aaKnown RBP23.64■■□□□ 1.37
SERF2-208ENST00000409617 GLI2P10070 1586 aa23.62■■□□□ 1.37
SERF2-208ENST00000409617 PCF11O94913 1555 aaKnown RBP23.6■■□□□ 1.37
SERF2-208ENST00000409617 PLEKHD1A6NEE1 506 aa23.59■■□□□ 1.37
SERF2-208ENST00000409617 FYCO1Q9BQS8 1478 aa23.59■■□□□ 1.37
SERF2-208ENST00000409617 KCNH8Q96L42 1107 aa23.58■■□□□ 1.37
SERF2-208ENST00000409617 CDK13Q14004 1512 aaKnown RBP23.58■■□□□ 1.36
SERF2-208ENST00000409617 CCDC18Q5T9S5 1454 aa23.54■■□□□ 1.36
SERF2-208ENST00000409617 CDK11AQ9UQ88 783 aaPredicted RBP23.53■■□□□ 1.36
SERF2-208ENST00000409617 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
SERF2-208ENST00000409617 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
SERF2-208ENST00000409617 MAP3K4Q9Y6R4 1608 aa23.48■■□□□ 1.35
SERF2-208ENST00000409617 CD109Q6YHK3 1445 aa23.45■■□□□ 1.34
SERF2-208ENST00000409617 TROQ12816 1431 aaPredicted RBP23.44■■□□□ 1.34
SERF2-208ENST00000409617 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
SERF2-208ENST00000409617 ABCA9Q8IUA7 1624 aa23.44■■□□□ 1.34
SERF2-208ENST00000409617 TSPOAP1O95153 1857 aa23.42■■□□□ 1.34
SERF2-208ENST00000409617 PPRC1Q5VV67 1664 aaKnown RBP23.41■■□□□ 1.34
SERF2-208ENST00000409617 MAGI3Q5TCQ9 1506 aa23.41■■□□□ 1.34
SERF2-208ENST00000409617 TEX14Q8IWB6 1497 aa23.38■■□□□ 1.33
SERF2-208ENST00000409617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.38■■□□□ 1.339e-21■■■□□ 15.8
SERF2-208ENST00000409617 KIF14Q15058 1648 aa23.33■■□□□ 1.32
SERF2-208ENST00000409617 TTC37Q6PGP7 1564 aa23.31■■□□□ 1.32
SERF2-208ENST00000409617 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
SERF2-208ENST00000409617 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
SERF2-208ENST00000409617 TIAM1Q13009 1591 aa23.29■■□□□ 1.32
SERF2-208ENST00000409617 PHLDB1Q86UU1 1377 aa23.28■■□□□ 1.32
SERF2-208ENST00000409617 PLCH2O75038 1416 aa23.28■■□□□ 1.32
SERF2-208ENST00000409617 NEO1Q92859 1461 aa23.25■■□□□ 1.31
SERF2-208ENST00000409617 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
SERF2-208ENST00000409617 KDM6BO15054 1643 aa23.24■■□□□ 1.31
SERF2-208ENST00000409617 ARAP3Q8WWN8 1544 aa23.23■■□□□ 1.31
SERF2-208ENST00000409617 COL17A1Q9UMD9 1497 aaPredicted RBP23.23■■□□□ 1.31
SERF2-208ENST00000409617 APLP2Q06481 763 aa23.22■■□□□ 1.31
SERF2-208ENST00000409617 LRRC9Q6ZRR7 1453 aa23.22■■□□□ 1.31
SERF2-208ENST00000409617 FANCAO15360 1455 aa23.21■■□□□ 1.31
SERF2-208ENST00000409617 MYO5CQ9NQX4 1742 aa23.2■■□□□ 1.3
SERF2-208ENST00000409617 EFCAB2Q5VUJ9 269 aa23.2■■□□□ 1.3
SERF2-208ENST00000409617 KANK4Q5T7N3 995 aaPredicted RBP23.19■■□□□ 1.3
SERF2-208ENST00000409617 AKNAQ7Z591 1439 aa23.18■■□□□ 1.3
SERF2-208ENST00000409617 CFAP74Q9C0B2 1584 aa23.17■■□□□ 1.3
SERF2-208ENST00000409617 GPATCH8Q9UKJ3 1502 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms