RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
SCRN1-203ENST00000409570 ABCC10Q5T3U5 1492 aa30.16■■■□□ 2.42
SCRN1-203ENST00000409570 MAPKBP1O60336 1514 aa30.14■■■□□ 2.42
SCRN1-203ENST00000409570 ADCY10Q96PN6 1610 aa30.14■■■□□ 2.41
SCRN1-203ENST00000409570 FAM69CQ0P6D2 419 aa30.12■■■□□ 2.41
SCRN1-203ENST00000409570 DIP2BQ9P265 1576 aa30.11■■■□□ 2.41
SCRN1-203ENST00000409570 NPM1P06748 294 aaKnown RBP eCLIP30.08■■■□□ 2.41
SCRN1-203ENST00000409570 KIAA0586Q9BVV6 1533 aa30.06■■■□□ 2.4
SCRN1-203ENST00000409570 IGF1RP08069 1367 aa30.03■■■□□ 2.4
SCRN1-203ENST00000409570 CUL7Q14999 1698 aa30.02■■■□□ 2.4
SCRN1-203ENST00000409570 TSPOAP1O95153 1857 aa29.99■■■□□ 2.39
SCRN1-203ENST00000409570 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
SCRN1-203ENST00000409570 KDM6BO15054 1643 aa29.94■■■□□ 2.38
SCRN1-203ENST00000409570 PTPRGP23470 1445 aa29.83■■■□□ 2.37
SCRN1-203ENST00000409570 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
SCRN1-203ENST00000409570 KDM4FA0A1W2PPD8 638 aa29.79■■■□□ 2.36
SCRN1-203ENST00000409570 TNIKQ9UKE5 1360 aa29.76■■■□□ 2.35
SCRN1-203ENST00000409570 ABCC2Q92887 1545 aa29.76■■■□□ 2.35
SCRN1-203ENST00000409570 TTBK1Q5TCY1 1321 aaPredicted RBP29.74■■■□□ 2.35
SCRN1-203ENST00000409570 CARMIL2Q6F5E8 1435 aa29.74■■■□□ 2.35
SCRN1-203ENST00000409570 IQGAP2Q13576 1575 aa29.73■■■□□ 2.35
SCRN1-203ENST00000409570 PPRC1Q5VV67 1664 aaKnown RBP29.72■■■□□ 2.35
SCRN1-203ENST00000409570 GLI2P10070 1586 aa29.69■■■□□ 2.34
SCRN1-203ENST00000409570 ASXL2Q76L83 1435 aa29.69■■■□□ 2.34
SCRN1-203ENST00000409570 PLB1Q6P1J6 1458 aa29.67■■■□□ 2.34
SCRN1-203ENST00000409570 UHRF1BP1LA0JNW5 1464 aa29.66■■■□□ 2.34
SCRN1-203ENST00000409570 DISP1Q96F81 1524 aa29.62■■■□□ 2.33
SCRN1-203ENST00000409570 UACAQ9BZF9 1416 aa29.61■■■□□ 2.33
SCRN1-203ENST00000409570 KDM5BQ9UGL1 1544 aa29.54■■■□□ 2.32
SCRN1-203ENST00000409570 MAP3K4Q9Y6R4 1608 aa29.53■■■□□ 2.32
SCRN1-203ENST00000409570 UGGT2Q9NYU1 1516 aa29.53■■■□□ 2.32
SCRN1-203ENST00000409570 EPRSP07814 1512 aaKnown RBP29.52■■■□□ 2.32
SCRN1-203ENST00000409570 ZCCHC11Q5TAX3 1644 aaKnown RBP29.52■■■□□ 2.32
SCRN1-203ENST00000409570 COL17A1Q9UMD9 1497 aaPredicted RBP29.49■■■□□ 2.31
SCRN1-203ENST00000409570 RAPGEF2Q9Y4G8 1499 aa29.49■■■□□ 2.31
SCRN1-203ENST00000409570 KIAA0556O60303 1618 aa29.48■■■□□ 2.31
SCRN1-203ENST00000409570 ADGRL1O94910 1474 aa29.47■■■□□ 2.31
SCRN1-203ENST00000409570 TEX14Q8IWB6 1497 aa29.41■■■□□ 2.3
SCRN1-203ENST00000409570 CTTNBP2Q8WZ74 1663 aa29.37■■■□□ 2.29
SCRN1-203ENST00000409570 WDR7Q9Y4E6 1490 aa29.33■■■□□ 2.29
SCRN1-203ENST00000409570 ILDR1Q86SU0 546 aaPredicted RBP29.28■■■□□ 2.28
SCRN1-203ENST00000409570 CFAP43Q8NDM7 1665 aa29.25■■■□□ 2.27
SCRN1-203ENST00000409570 ABCA8O94911 1581 aa29.25■■■□□ 2.27
SCRN1-203ENST00000409570 GOLGA3Q08378 1498 aa29.22■■■□□ 2.27
SCRN1-203ENST00000409570 HECW2Q9P2P5 1572 aa29.21■■■□□ 2.27
SCRN1-203ENST00000409570 MAGI3Q5TCQ9 1506 aa29.2■■■□□ 2.27
SCRN1-203ENST00000409570 CD109Q6YHK3 1445 aa29.19■■■□□ 2.26
SCRN1-203ENST00000409570 KCNH8Q96L42 1107 aa29.14■■■□□ 2.26
SCRN1-203ENST00000409570 PRXQ9BXM0 1461 aa29.1■■■□□ 2.25
SCRN1-203ENST00000409570 KIF21BO75037 1637 aa29.05■■■□□ 2.24
SCRN1-203ENST00000409570 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
SCRN1-203ENST00000409570 ATP10BO94823 1461 aa28.97■■■□□ 2.23
SCRN1-203ENST00000409570 ABCA9Q8IUA7 1624 aa28.94■■■□□ 2.22
SCRN1-203ENST00000409570 ARID3CA6NKF2 412 aa28.94■■■□□ 2.22
SCRN1-203ENST00000409570 P3H3Q8IVL6 736 aa28.92■■■□□ 2.22
SCRN1-203ENST00000409570 SAMD9Q5K651 1589 aa28.88■■■□□ 2.21
SCRN1-203ENST00000409570 FAM9AQ8IZU1 332 aaPredicted RBP28.86■■■□□ 2.21
SCRN1-203ENST00000409570 RAPGEF6Q8TEU7 1601 aa28.86■■■□□ 2.21
SCRN1-203ENST00000409570 ADAMTSL3P82987 1691 aa28.85■■■□□ 2.21
SCRN1-203ENST00000409570 PHLDB1Q86UU1 1377 aa28.85■■■□□ 2.21
SCRN1-203ENST00000409570 NEO1Q92859 1461 aa28.78■■■□□ 2.2
SCRN1-203ENST00000409570 RAPGEF3O95398 923 aa28.78■■■□□ 2.2
SCRN1-203ENST00000409570 PTPRMP28827 1452 aa28.78■■■□□ 2.2
SCRN1-203ENST00000409570 FRMPD1Q5SYB0 1578 aa28.77■■■□□ 2.2
SCRN1-203ENST00000409570 BCORL1Q5H9F3 1711 aa28.75■■■□□ 2.19
SCRN1-203ENST00000409570 CSRNP3Q8WYN3 585 aa28.74■■■□□ 2.19
SCRN1-203ENST00000409570 NUP153P49790 1475 aaKnown RBP28.72■■■□□ 2.19
SCRN1-203ENST00000409570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.69■■■□□ 2.18
SCRN1-203ENST00000409570 HNRNPUL2Q1KMD3 747 aaKnown RBP28.69■■■□□ 2.18
SCRN1-203ENST00000409570 MADDQ8WXG6 1647 aa28.69■■■□□ 2.18
SCRN1-203ENST00000409570 RICTORQ6R327 1708 aa28.65■■■□□ 2.18
SCRN1-203ENST00000409570 FHOD3Q2V2M9 1422 aa28.63■■■□□ 2.17
SCRN1-203ENST00000409570 FBXO41Q8TF61 875 aa28.62■■■□□ 2.17
SCRN1-203ENST00000409570 ARHGEF40Q8TER5 1519 aa28.62■■■□□ 2.17
SCRN1-203ENST00000409570 ARID4BQ4LE39 1312 aaPredicted RBP28.6■■■□□ 2.17
SCRN1-203ENST00000409570 PCF11O94913 1555 aaKnown RBP28.59■■■□□ 2.17
SCRN1-203ENST00000409570 RIMS1Q86UR5 1692 aaKnown RBP28.58■■■□□ 2.17
SCRN1-203ENST00000409570 RANGAP1P46060 587 aaPredicted RBP28.58■■■□□ 2.17
SCRN1-203ENST00000409570 DENND4BO75064 1496 aaPredicted RBP28.58■■■□□ 2.17
SCRN1-203ENST00000409570 CFAP74Q9C0B2 1584 aa28.56■■■□□ 2.16
SCRN1-203ENST00000409570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.55■■■□□ 2.16
SCRN1-203ENST00000409570 LMTK3Q96Q04 1460 aa28.55■■■□□ 2.16
SCRN1-203ENST00000409570 AKNAQ7Z591 1439 aa28.55■■■□□ 2.16
SCRN1-203ENST00000409570 PLEKHD1A6NEE1 506 aa28.55■■■□□ 2.16
SCRN1-203ENST00000409570 EEA1Q15075 1411 aa28.54■■■□□ 2.16
SCRN1-203ENST00000409570 FANCAO15360 1455 aa28.53■■■□□ 2.16
SCRN1-203ENST00000409570 TTC37Q6PGP7 1564 aa28.52■■■□□ 2.16
SCRN1-203ENST00000409570 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
SCRN1-203ENST00000409570 ZMYM4Q5VZL5 1548 aa28.49■■■□□ 2.15
SCRN1-203ENST00000409570 EFCAB5A4FU69 1503 aa28.48■■■□□ 2.15
SCRN1-203ENST00000409570 ZFYVE16Q7Z3T8 1539 aa28.43■■■□□ 2.14
SCRN1-203ENST00000409570 YEATS2Q9ULM3 1422 aa28.43■■■□□ 2.14
SCRN1-203ENST00000409570 CDK13Q14004 1512 aaKnown RBP28.41■■■□□ 2.14
SCRN1-203ENST00000409570 POGZQ7Z3K3 1410 aa28.41■■■□□ 2.14
SCRN1-203ENST00000409570 HECW1Q76N89 1606 aa28.4■■■□□ 2.14
SCRN1-203ENST00000409570 MAGI2Q86UL8 1455 aa28.39■■■□□ 2.13
SCRN1-203ENST00000409570 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
SCRN1-203ENST00000409570 HSPA2P54652 639 aa28.36■■■□□ 2.13
SCRN1-203ENST00000409570 PLPPR3Q6T4P5 718 aa28.34■■■□□ 2.13
SCRN1-203ENST00000409570 PLCH2O75038 1416 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms