RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
SHANK2-204ENST00000409530 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
SHANK2-204ENST00000409530 CHD1O14646 1710 aa24.95■■□□□ 1.58
SHANK2-204ENST00000409530 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
SHANK2-204ENST00000409530 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
SHANK2-204ENST00000409530 IQGAP2Q13576 1575 aa24.83■■□□□ 1.57
SHANK2-204ENST00000409530 ARHGAP35Q9NRY4 1499 aa24.81■■□□□ 1.56
SHANK2-204ENST00000409530 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
SHANK2-204ENST00000409530 NUP160Q12769 1436 aa24.73■■□□□ 1.55
SHANK2-204ENST00000409530 FHOD3Q2V2M9 1422 aa24.73■■□□□ 1.55
SHANK2-204ENST00000409530 KIAA0586Q9BVV6 1533 aa24.73■■□□□ 1.55
SHANK2-204ENST00000409530 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
SHANK2-204ENST00000409530 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
SHANK2-204ENST00000409530 EFCAB5A4FU69 1503 aa24.69■■□□□ 1.54
SHANK2-204ENST00000409530 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
SHANK2-204ENST00000409530 VPS8Q8N3P4 1428 aa24.67■■□□□ 1.54
SHANK2-204ENST00000409530 UGGT2Q9NYU1 1516 aa24.61■■□□□ 1.53
SHANK2-204ENST00000409530 KIAA0556O60303 1618 aa24.59■■□□□ 1.53
SHANK2-204ENST00000409530 ATP1B4Q9UN42 357 aaPredicted RBP24.58■■□□□ 1.53
SHANK2-204ENST00000409530 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
SHANK2-204ENST00000409530 DISP1Q96F81 1524 aa24.57■■□□□ 1.52
SHANK2-204ENST00000409530 PCF11O94913 1555 aaKnown RBP24.56■■□□□ 1.52
SHANK2-204ENST00000409530 CLASP1Q7Z460 1538 aa24.52■■□□□ 1.52
SHANK2-204ENST00000409530 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
SHANK2-204ENST00000409530 APLP2Q06481 763 aa24.48■■□□□ 1.51
SHANK2-204ENST00000409530 CARMIL2Q6F5E8 1435 aa24.47■■□□□ 1.51
SHANK2-204ENST00000409530 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
SHANK2-204ENST00000409530 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
SHANK2-204ENST00000409530 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
SHANK2-204ENST00000409530 ARID3CA6NKF2 412 aa24.44■■□□□ 1.5
SHANK2-204ENST00000409530 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
SHANK2-204ENST00000409530 FYCO1Q9BQS8 1478 aa24.39■■□□□ 1.5
SHANK2-204ENST00000409530 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
SHANK2-204ENST00000409530 LRRIQ1Q96JM4 1722 aa24.37■■□□□ 1.49
SHANK2-204ENST00000409530 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.49
SHANK2-204ENST00000409530 HECW1Q76N89 1606 aa24.32■■□□□ 1.48
SHANK2-204ENST00000409530 TIAM1Q13009 1591 aa24.32■■□□□ 1.48
SHANK2-204ENST00000409530 CFAP43Q8NDM7 1665 aa24.32■■□□□ 1.48
SHANK2-204ENST00000409530 RAPGEF6Q8TEU7 1601 aa24.32■■□□□ 1.48
SHANK2-204ENST00000409530 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
SHANK2-204ENST00000409530 CDK13Q14004 1512 aaKnown RBP24.28■■□□□ 1.48
SHANK2-204ENST00000409530 PTPRGP23470 1445 aa24.28■■□□□ 1.48
SHANK2-204ENST00000409530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.24■■□□□ 1.47
SHANK2-204ENST00000409530 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
SHANK2-204ENST00000409530 NUP153P49790 1475 aaKnown RBP24.23■■□□□ 1.47
SHANK2-204ENST00000409530 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
SHANK2-204ENST00000409530 EPRSP07814 1512 aaKnown RBP24.21■■□□□ 1.47
SHANK2-204ENST00000409530 ABCA8O94911 1581 aa24.19■■□□□ 1.46
SHANK2-204ENST00000409530 LRRC9Q6ZRR7 1453 aa24.18■■□□□ 1.46
SHANK2-204ENST00000409530 CCDC18Q5T9S5 1454 aa24.17■■□□□ 1.46
SHANK2-204ENST00000409530 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
SHANK2-204ENST00000409530 MTUS2Q5JR59 1369 aa24.15■■□□□ 1.46
SHANK2-204ENST00000409530 TRIM26Q12899 539 aaPredicted RBP24.14■■□□□ 1.46
SHANK2-204ENST00000409530 MAGI3Q5TCQ9 1506 aa24.13■■□□□ 1.45
SHANK2-204ENST00000409530 UACAQ9BZF9 1416 aa24.11■■□□□ 1.45
SHANK2-204ENST00000409530 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
SHANK2-204ENST00000409530 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
SHANK2-204ENST00000409530 EHBP1L1Q8N3D4 1523 aa24.06■■□□□ 1.44
SHANK2-204ENST00000409530 ATP10BO94823 1461 aa24.03■■□□□ 1.44
SHANK2-204ENST00000409530 RIMBP3CA6NJZ7 1639 aa24.03■■□□□ 1.44
SHANK2-204ENST00000409530 RIMBP3BA6NNM3 1639 aa24.03■■□□□ 1.44
SHANK2-204ENST00000409530 RIMBP3Q9UFD9 1639 aa24.03■■□□□ 1.44
SHANK2-204ENST00000409530 ADCY10Q96PN6 1610 aa24.02■■□□□ 1.44
SHANK2-204ENST00000409530 SUPT6HQ7KZ85 1726 aaKnown RBP24.01■■□□□ 1.43
SHANK2-204ENST00000409530 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
SHANK2-204ENST00000409530 ZCCHC11Q5TAX3 1644 aaKnown RBP23.99■■□□□ 1.43
SHANK2-204ENST00000409530 NCOA2Q15596 1464 aa23.98■■□□□ 1.43
SHANK2-204ENST00000409530 CDK11AQ9UQ88 783 aaPredicted RBP23.96■■□□□ 1.43
SHANK2-204ENST00000409530 KIF14Q15058 1648 aa23.95■■□□□ 1.42
SHANK2-204ENST00000409530 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
SHANK2-204ENST00000409530 UHRF1BP1LA0JNW5 1464 aa23.92■■□□□ 1.42
SHANK2-204ENST00000409530 TROQ12816 1431 aaPredicted RBP23.92■■□□□ 1.42
SHANK2-204ENST00000409530 PLEKHD1A6NEE1 506 aa23.91■■□□□ 1.42
SHANK2-204ENST00000409530 KDM5BQ9UGL1 1544 aa23.88■■□□□ 1.41
SHANK2-204ENST00000409530 ITGAEP38570 1179 aa23.87■■□□□ 1.41
SHANK2-204ENST00000409530 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
SHANK2-204ENST00000409530 KCNH8Q96L42 1107 aa23.84■■□□□ 1.41
SHANK2-204ENST00000409530 CCNB3Q8WWL7 1395 aa23.84■■□□□ 1.41
SHANK2-204ENST00000409530 RRBP1Q9P2E9 1410 aaKnown RBP23.83■■□□□ 1.41
SHANK2-204ENST00000409530 MYOM3Q5VTT5 1437 aa23.83■■□□□ 1.4
SHANK2-204ENST00000409530 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
SHANK2-204ENST00000409530 NPM1P06748 294 aaKnown RBP eCLIP23.79■■□□□ 1.4
SHANK2-204ENST00000409530 TTC37Q6PGP7 1564 aa23.77■■□□□ 1.4
SHANK2-204ENST00000409530 PTPN23Q9H3S7 1636 aa23.76■■□□□ 1.39
SHANK2-204ENST00000409530 ITSN2Q9NZM3 1697 aa23.74■■□□□ 1.39
SHANK2-204ENST00000409530 CDC42BPAQ5VT25 1732 aa23.74■■□□□ 1.39
SHANK2-204ENST00000409530 ASXL2Q76L83 1435 aa23.74■■□□□ 1.39
SHANK2-204ENST00000409530 WDR7Q9Y4E6 1490 aa23.73■■□□□ 1.39
SHANK2-204ENST00000409530 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
SHANK2-204ENST00000409530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.71■■□□□ 1.39
SHANK2-204ENST00000409530 ABCC10Q5T3U5 1492 aa23.71■■□□□ 1.39
SHANK2-204ENST00000409530 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
SHANK2-204ENST00000409530 ZNF644Q9H582 1327 aaPredicted RBP23.68■■□□□ 1.38
SHANK2-204ENST00000409530 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
SHANK2-204ENST00000409530 MYO5CQ9NQX4 1742 aa23.66■■□□□ 1.38
SHANK2-204ENST00000409530 PREX2Q70Z35 1606 aa23.65■■□□□ 1.38
SHANK2-204ENST00000409530 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.37
SHANK2-204ENST00000409530 ARHGAP5Q13017 1502 aa23.63■■□□□ 1.37
SHANK2-204ENST00000409530 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
SHANK2-204ENST00000409530 MIA2Q96PC5 1412 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms