RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
NIF3L1-202ENST00000409020 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
NIF3L1-202ENST00000409020 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
NIF3L1-202ENST00000409020 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
NIF3L1-202ENST00000409020 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
NIF3L1-202ENST00000409020 CUL7Q14999 1698 aa16.62■□□□□ 0.25
NIF3L1-202ENST00000409020 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
NIF3L1-202ENST00000409020 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
NIF3L1-202ENST00000409020 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
NIF3L1-202ENST00000409020 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
NIF3L1-202ENST00000409020 IQGAP2Q13576 1575 aa16.43■□□□□ 0.22
NIF3L1-202ENST00000409020 ADCY10Q96PN6 1610 aa16.43■□□□□ 0.22
NIF3L1-202ENST00000409020 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
NIF3L1-202ENST00000409020 DISP1Q96F81 1524 aa16.39■□□□□ 0.21
NIF3L1-202ENST00000409020 PTPRGP23470 1445 aa16.37■□□□□ 0.21
NIF3L1-202ENST00000409020 PRXQ9BXM0 1461 aa16.36■□□□□ 0.21
NIF3L1-202ENST00000409020 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
NIF3L1-202ENST00000409020 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
NIF3L1-202ENST00000409020 KIF13AQ9H1H9 1805 aa16.34■□□□□ 0.21
NIF3L1-202ENST00000409020 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
NIF3L1-202ENST00000409020 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
NIF3L1-202ENST00000409020 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
NIF3L1-202ENST00000409020 KIAA0556O60303 1618 aa16.3■□□□□ 0.2
NIF3L1-202ENST00000409020 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
NIF3L1-202ENST00000409020 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
NIF3L1-202ENST00000409020 CTTNBP2Q8WZ74 1663 aa16.29■□□□□ 0.2
NIF3L1-202ENST00000409020 DIP2BQ9P265 1576 aa16.29■□□□□ 0.2
NIF3L1-202ENST00000409020 ABCC2Q92887 1545 aa16.27■□□□□ 0.19
NIF3L1-202ENST00000409020 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
NIF3L1-202ENST00000409020 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
NIF3L1-202ENST00000409020 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
NIF3L1-202ENST00000409020 UHRF1BP1LA0JNW5 1464 aa16.23■□□□□ 0.19
NIF3L1-202ENST00000409020 PLB1Q6P1J6 1458 aa16.21■□□□□ 0.18
NIF3L1-202ENST00000409020 FOXD1Q16676 465 aa16.21■□□□□ 0.18
NIF3L1-202ENST00000409020 ASXL2Q76L83 1435 aa16.2■□□□□ 0.18
NIF3L1-202ENST00000409020 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
NIF3L1-202ENST00000409020 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
NIF3L1-202ENST00000409020 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
NIF3L1-202ENST00000409020 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
NIF3L1-202ENST00000409020 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
NIF3L1-202ENST00000409020 EEA1Q15075 1411 aa16.15■□□□□ 0.18
NIF3L1-202ENST00000409020 TSPOAP1O95153 1857 aa16.15■□□□□ 0.18
NIF3L1-202ENST00000409020 ABCA8O94911 1581 aa16.14■□□□□ 0.17
NIF3L1-202ENST00000409020 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
NIF3L1-202ENST00000409020 ADRA2BP18089 450 aa16.11■□□□□ 0.17
NIF3L1-202ENST00000409020 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
NIF3L1-202ENST00000409020 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
NIF3L1-202ENST00000409020 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
NIF3L1-202ENST00000409020 GLI2P10070 1586 aa16.1■□□□□ 0.17
NIF3L1-202ENST00000409020 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
NIF3L1-202ENST00000409020 PPRC1Q5VV67 1664 aaKnown RBP16.09■□□□□ 0.17
NIF3L1-202ENST00000409020 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.17
NIF3L1-202ENST00000409020 KIF21BO75037 1637 aa16.07■□□□□ 0.16
NIF3L1-202ENST00000409020 MYT1Q01538 1121 aa16.07■□□□□ 0.16
NIF3L1-202ENST00000409020 WDR7Q9Y4E6 1490 aa16.07■□□□□ 0.16
NIF3L1-202ENST00000409020 KDM6BO15054 1643 aa16.07■□□□□ 0.16
NIF3L1-202ENST00000409020 FHOD3Q2V2M9 1422 aa16.05■□□□□ 0.16
NIF3L1-202ENST00000409020 MAP3K4Q9Y6R4 1608 aa16.04■□□□□ 0.16
NIF3L1-202ENST00000409020 KCNH8Q96L42 1107 aa16.02■□□□□ 0.15
NIF3L1-202ENST00000409020 ATP10BO94823 1461 aa16.02■□□□□ 0.15
NIF3L1-202ENST00000409020 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
NIF3L1-202ENST00000409020 RAPGEF6Q8TEU7 1601 aa15.98■□□□□ 0.15
NIF3L1-202ENST00000409020 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
NIF3L1-202ENST00000409020 UBTFP17480 764 aaKnown RBP15.95■□□□□ 0.14
NIF3L1-202ENST00000409020 CD109Q6YHK3 1445 aa15.94■□□□□ 0.14
NIF3L1-202ENST00000409020 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
NIF3L1-202ENST00000409020 TEX14Q8IWB6 1497 aa15.93■□□□□ 0.14
NIF3L1-202ENST00000409020 CFAP43Q8NDM7 1665 aa15.92■□□□□ 0.14
NIF3L1-202ENST00000409020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
NIF3L1-202ENST00000409020 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
NIF3L1-202ENST00000409020 MAGI3Q5TCQ9 1506 aa15.9■□□□□ 0.14
NIF3L1-202ENST00000409020 ARHGAP35Q9NRY4 1499 aa15.9■□□□□ 0.14
NIF3L1-202ENST00000409020 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
NIF3L1-202ENST00000409020 ABCA9Q8IUA7 1624 aa15.86■□□□□ 0.13
NIF3L1-202ENST00000409020 CDK13Q14004 1512 aaKnown RBP15.85■□□□□ 0.13
NIF3L1-202ENST00000409020 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
NIF3L1-202ENST00000409020 PLEKHD1A6NEE1 506 aa15.79■□□□□ 0.12
NIF3L1-202ENST00000409020 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
NIF3L1-202ENST00000409020 ADGRL1O94910 1474 aa15.78■□□□□ 0.12
NIF3L1-202ENST00000409020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
NIF3L1-202ENST00000409020 ARAP3Q8WWN8 1544 aa15.78■□□□□ 0.12
NIF3L1-202ENST00000409020 TTC37Q6PGP7 1564 aa15.77■□□□□ 0.12
NIF3L1-202ENST00000409020 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
NIF3L1-202ENST00000409020 RAPGEF3O95398 923 aa15.76■□□□□ 0.11
NIF3L1-202ENST00000409020 LRRIQ1Q96JM4 1722 aa15.74■□□□□ 0.11
NIF3L1-202ENST00000409020 NEO1Q92859 1461 aa15.73■□□□□ 0.11
NIF3L1-202ENST00000409020 FRMPD1Q5SYB0 1578 aa15.73■□□□□ 0.11
NIF3L1-202ENST00000409020 PCF11O94913 1555 aaKnown RBP15.72■□□□□ 0.11
NIF3L1-202ENST00000409020 KIF14Q15058 1648 aa15.7■□□□□ 0.1
NIF3L1-202ENST00000409020 FANCAO15360 1455 aa15.7■□□□□ 0.1
NIF3L1-202ENST00000409020 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
NIF3L1-202ENST00000409020 CLIP1P30622 1438 aa15.69■□□□□ 0.1
NIF3L1-202ENST00000409020 AKNAQ7Z591 1439 aa15.69■□□□□ 0.1
NIF3L1-202ENST00000409020 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
NIF3L1-202ENST00000409020 PLCH2O75038 1416 aa15.65■□□□□ 0.1
NIF3L1-202ENST00000409020 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
NIF3L1-202ENST00000409020 RICTORQ6R327 1708 aa15.64■□□□□ 0.09
NIF3L1-202ENST00000409020 DENND4BO75064 1496 aaPredicted RBP15.64■□□□□ 0.09
NIF3L1-202ENST00000409020 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
NIF3L1-202ENST00000409020 CFAP74Q9C0B2 1584 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms