RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 PRG4Q92954 1404 aaPredicted RBP39.06■■■■□ 3.84
KDELR3-202ENST00000409006 JPH4Q96JJ6 628 aa39.06■■■■□ 3.84
KDELR3-202ENST00000409006 KIAA0586Q9BVV6 1533 aa38.89■■■■□ 3.82
KDELR3-202ENST00000409006 CARMIL1Q5VZK9 1371 aa38.89■■■■□ 3.82
KDELR3-202ENST00000409006 KIF13AQ9H1H9 1805 aa38.64■■■■□ 3.78
KDELR3-202ENST00000409006 ADCY10Q96PN6 1610 aa38.63■■■■□ 3.78
KDELR3-202ENST00000409006 IQGAP2Q13576 1575 aa38.6■■■■□ 3.77
KDELR3-202ENST00000409006 RAPGEF2Q9Y4G8 1499 aa38.57■■■■□ 3.76
KDELR3-202ENST00000409006 PTPRGP23470 1445 aa38.46■■■■□ 3.75
KDELR3-202ENST00000409006 NPM1P06748 294 aaKnown RBP eCLIP38.46■■■■□ 3.75
KDELR3-202ENST00000409006 TTBK1Q5TCY1 1321 aaPredicted RBP38.45■■■■□ 3.75
KDELR3-202ENST00000409006 MAPKBP1O60336 1514 aa38.45■■■■□ 3.75
KDELR3-202ENST00000409006 CARMIL2Q6F5E8 1435 aa38.45■■■■□ 3.75
KDELR3-202ENST00000409006 DISP1Q96F81 1524 aa38.42■■■■□ 3.74
KDELR3-202ENST00000409006 TNIKQ9UKE5 1360 aa38.42■■■■□ 3.74
KDELR3-202ENST00000409006 ABCC10Q5T3U5 1492 aa38.39■■■■□ 3.74
KDELR3-202ENST00000409006 UGGT2Q9NYU1 1516 aa38.36■■■■□ 3.73
KDELR3-202ENST00000409006 DIP2BQ9P265 1576 aa38.35■■■■□ 3.73
KDELR3-202ENST00000409006 CTTNBP2Q8WZ74 1663 aa38.34■■■■□ 3.73
KDELR3-202ENST00000409006 FAM69CQ0P6D2 419 aa38.33■■■■□ 3.73
KDELR3-202ENST00000409006 PRXQ9BXM0 1461 aa38.28■■■■□ 3.72
KDELR3-202ENST00000409006 KIAA0556O60303 1618 aa38.27■■■■□ 3.72
KDELR3-202ENST00000409006 ABCC2Q92887 1545 aa38.23■■■■□ 3.71
KDELR3-202ENST00000409006 UHRF1BP1LA0JNW5 1464 aa38.2■■■■□ 3.71
KDELR3-202ENST00000409006 UACAQ9BZF9 1416 aa38.2■■■■□ 3.71
KDELR3-202ENST00000409006 TSPOAP1O95153 1857 aa38.17■■■■□ 3.7
KDELR3-202ENST00000409006 ASXL2Q76L83 1435 aa38.09■■■■□ 3.69
KDELR3-202ENST00000409006 KDM5BQ9UGL1 1544 aa38.04■■■■□ 3.68
KDELR3-202ENST00000409006 ZCCHC11Q5TAX3 1644 aaKnown RBP38.03■■■■□ 3.68
KDELR3-202ENST00000409006 CSRNP3Q8WYN3 585 aa38.03■■■■□ 3.68
KDELR3-202ENST00000409006 PLB1Q6P1J6 1458 aa38.02■■■■□ 3.68
KDELR3-202ENST00000409006 GOLGA3Q08378 1498 aa38.01■■■■□ 3.67
KDELR3-202ENST00000409006 GLI2P10070 1586 aa37.95■■■■□ 3.67
KDELR3-202ENST00000409006 PPRC1Q5VV67 1664 aaKnown RBP37.93■■■■□ 3.66
KDELR3-202ENST00000409006 KDM6BO15054 1643 aa37.91■■■■□ 3.66
KDELR3-202ENST00000409006 ABCA8O94911 1581 aa37.9■■■■□ 3.66
KDELR3-202ENST00000409006 EPRSP07814 1512 aaKnown RBP37.87■■■■□ 3.65
KDELR3-202ENST00000409006 EEA1Q15075 1411 aa37.87■■■■□ 3.65
KDELR3-202ENST00000409006 FAM9AQ8IZU1 332 aaPredicted RBP37.82■■■■□ 3.64
KDELR3-202ENST00000409006 AEBP2Q6ZN18 517 aaPredicted RBP37.81■■■■□ 3.64
KDELR3-202ENST00000409006 P3H3Q8IVL6 736 aa37.81■■■■□ 3.64
KDELR3-202ENST00000409006 MAP3K4Q9Y6R4 1608 aa37.8■■■■□ 3.64
KDELR3-202ENST00000409006 SAMD9Q5K651 1589 aa37.77■■■■□ 3.64
KDELR3-202ENST00000409006 WDR7Q9Y4E6 1490 aa37.75■■■■□ 3.63
KDELR3-202ENST00000409006 CHIC1Q5VXU3 224 aa37.65■■■■□ 3.62
KDELR3-202ENST00000409006 KIF21BO75037 1637 aa37.65■■■■□ 3.62
KDELR3-202ENST00000409006 ARID3CA6NKF2 412 aa37.61■■■■□ 3.61
KDELR3-202ENST00000409006 RANGAP1P46060 587 aaPredicted RBP37.61■■■■□ 3.61
KDELR3-202ENST00000409006 COL17A1Q9UMD9 1497 aaPredicted RBP37.6■■■■□ 3.61
KDELR3-202ENST00000409006 KCNH8Q96L42 1107 aa37.59■■■■□ 3.61
KDELR3-202ENST00000409006 ATP10BO94823 1461 aa37.58■■■■□ 3.61
KDELR3-202ENST00000409006 RAPGEF6Q8TEU7 1601 aa37.56■■■■□ 3.6
KDELR3-202ENST00000409006 TEX14Q8IWB6 1497 aa37.56■■■■□ 3.6
KDELR3-202ENST00000409006 CFAP43Q8NDM7 1665 aa37.56■■■■□ 3.6
KDELR3-202ENST00000409006 FHOD3Q2V2M9 1422 aa37.51■■■■□ 3.59
KDELR3-202ENST00000409006 CD109Q6YHK3 1445 aa37.49■■■■□ 3.59
KDELR3-202ENST00000409006 MAGI3Q5TCQ9 1506 aa37.45■■■■□ 3.59
KDELR3-202ENST00000409006 EHMT2Q96KQ7 1210 aa37.44■■■■□ 3.58
KDELR3-202ENST00000409006 KDM4FA0A1W2PPD8 638 aa37.42■■■■□ 3.58
KDELR3-202ENST00000409006 NUP153P49790 1475 aaKnown RBP37.41■■■■□ 3.58
KDELR3-202ENST00000409006 EFCAB5A4FU69 1503 aa37.38■■■■□ 3.57
KDELR3-202ENST00000409006 ABCA9Q8IUA7 1624 aa37.33■■■■□ 3.57
KDELR3-202ENST00000409006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.31■■■■□ 3.56
KDELR3-202ENST00000409006 UBTFP17480 764 aaKnown RBP37.31■■■■□ 3.56
KDELR3-202ENST00000409006 HNRNPUL2Q1KMD3 747 aaKnown RBP37.31■■■■□ 3.56
KDELR3-202ENST00000409006 ADGRL1O94910 1474 aa37.17■■■■□ 3.54
KDELR3-202ENST00000409006 ARHGAP35Q9NRY4 1499 aa37.16■■■■□ 3.54
KDELR3-202ENST00000409006 ARAP3Q8WWN8 1544 aa37.15■■■■□ 3.54
KDELR3-202ENST00000409006 PLEKHD1A6NEE1 506 aa37.11■■■■□ 3.53
KDELR3-202ENST00000409006 CDK13Q14004 1512 aaKnown RBP37.1■■■■□ 3.53
KDELR3-202ENST00000409006 NEO1Q92859 1461 aa37.03■■■■□ 3.52
KDELR3-202ENST00000409006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.03■■■■□ 3.52
KDELR3-202ENST00000409006 PHLDB1Q86UU1 1377 aa37.03■■■■□ 3.52
KDELR3-202ENST00000409006 FMN1Q68DA7 1419 aa37.02■■■■□ 3.52
KDELR3-202ENST00000409006 TTC37Q6PGP7 1564 aa37■■■■□ 3.51
KDELR3-202ENST00000409006 HECW1Q76N89 1606 aa36.99■■■■□ 3.51
KDELR3-202ENST00000409006 RAPGEF3O95398 923 aa36.97■■■■□ 3.51
KDELR3-202ENST00000409006 ATP1B4Q9UN42 357 aaPredicted RBP36.96■■■■□ 3.51
KDELR3-202ENST00000409006 LRRIQ1Q96JM4 1722 aa36.95■■■■□ 3.51
KDELR3-202ENST00000409006 FRMPD1Q5SYB0 1578 aa36.95■■■■□ 3.51
KDELR3-202ENST00000409006 FANCAO15360 1455 aa36.86■■■■□ 3.49
KDELR3-202ENST00000409006 RICTORQ6R327 1708 aa36.85■■■■□ 3.49
KDELR3-202ENST00000409006 AKNAQ7Z591 1439 aa36.85■■■■□ 3.49
KDELR3-202ENST00000409006 CFAP74Q9C0B2 1584 aa36.84■■■■□ 3.49
KDELR3-202ENST00000409006 KIF14Q15058 1648 aa36.8■■■■□ 3.48
KDELR3-202ENST00000409006 DENND4BO75064 1496 aaPredicted RBP36.78■■■■□ 3.48
KDELR3-202ENST00000409006 PCF11O94913 1555 aaKnown RBP36.76■■■■□ 3.48
KDELR3-202ENST00000409006 MYO5CQ9NQX4 1742 aa36.75■■■■□ 3.47
KDELR3-202ENST00000409006 PLCH2O75038 1416 aa36.75■■■■□ 3.47
KDELR3-202ENST00000409006 CDK11AQ9UQ88 783 aaPredicted RBP36.73■■■■□ 3.47
KDELR3-202ENST00000409006 TROQ12816 1431 aaPredicted RBP36.71■■■■□ 3.47
KDELR3-202ENST00000409006 CASKIN1Q8WXD9 1431 aa36.69■■■■□ 3.46
KDELR3-202ENST00000409006 ADAMTSL3P82987 1691 aa36.67■■■■□ 3.46
KDELR3-202ENST00000409006 ARHGEF40Q8TER5 1519 aa36.67■■■■□ 3.46
KDELR3-202ENST00000409006 CLIP1P30622 1438 aa36.64■■■■□ 3.46
KDELR3-202ENST00000409006 ZMYM4Q5VZL5 1548 aa36.64■■■■□ 3.46
KDELR3-202ENST00000409006 BCORL1Q5H9F3 1711 aa36.63■■■■□ 3.45
KDELR3-202ENST00000409006 SCAPERQ9BY12 1400 aa36.61■■■■□ 3.45
KDELR3-202ENST00000409006 HECW2Q9P2P5 1572 aa36.59■■■■□ 3.45
KDELR3-202ENST00000409006 CCDC18Q5T9S5 1454 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms