RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
SNORD88C-201ENST00000408061 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
SNORD88C-201ENST00000408061 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
SNORD88C-201ENST00000408061 APLP2Q06481 763 aa16.07■□□□□ 0.16
SNORD88C-201ENST00000408061 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
SNORD88C-201ENST00000408061 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
SNORD88C-201ENST00000408061 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
SNORD88C-201ENST00000408061 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
SNORD88C-201ENST00000408061 SAMD9Q5K651 1589 aa16.01■□□□□ 0.15
SNORD88C-201ENST00000408061 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
SNORD88C-201ENST00000408061 MAP3K1Q13233 1512 aa16■□□□□ 0.15
SNORD88C-201ENST00000408061 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
SNORD88C-201ENST00000408061 FMN1Q68DA7 1419 aa16■□□□□ 0.15
SNORD88C-201ENST00000408061 NUP160Q12769 1436 aa15.98■□□□□ 0.15
SNORD88C-201ENST00000408061 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
SNORD88C-201ENST00000408061 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
SNORD88C-201ENST00000408061 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
SNORD88C-201ENST00000408061 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
SNORD88C-201ENST00000408061 FBLN2P98095 1184 aa15.91■□□□□ 0.14
SNORD88C-201ENST00000408061 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
SNORD88C-201ENST00000408061 CARMIL2Q6F5E8 1435 aa15.89■□□□□ 0.13
SNORD88C-201ENST00000408061 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
SNORD88C-201ENST00000408061 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
SNORD88C-201ENST00000408061 CHD1O14646 1710 aa15.85■□□□□ 0.13
SNORD88C-201ENST00000408061 TIAM1Q13009 1591 aa15.85■□□□□ 0.13
SNORD88C-201ENST00000408061 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
SNORD88C-201ENST00000408061 DISP1Q96F81 1524 aa15.84■□□□□ 0.13
SNORD88C-201ENST00000408061 PCF11O94913 1555 aaKnown RBP15.83■□□□□ 0.12
SNORD88C-201ENST00000408061 CFAP43Q8NDM7 1665 aa15.82■□□□□ 0.12
SNORD88C-201ENST00000408061 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
SNORD88C-201ENST00000408061 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
SNORD88C-201ENST00000408061 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
SNORD88C-201ENST00000408061 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
SNORD88C-201ENST00000408061 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
SNORD88C-201ENST00000408061 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
SNORD88C-201ENST00000408061 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
SNORD88C-201ENST00000408061 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
SNORD88C-201ENST00000408061 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
SNORD88C-201ENST00000408061 RAPGEF6Q8TEU7 1601 aa15.71■□□□□ 0.11
SNORD88C-201ENST00000408061 CDK11AQ9UQ88 783 aaPredicted RBP15.7■□□□□ 0.1
SNORD88C-201ENST00000408061 EPRSP07814 1512 aaKnown RBP15.69■□□□□ 0.1
SNORD88C-201ENST00000408061 MTUS2Q5JR59 1369 aa15.69■□□□□ 0.1
SNORD88C-201ENST00000408061 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
SNORD88C-201ENST00000408061 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
SNORD88C-201ENST00000408061 LRRIQ1Q96JM4 1722 aa15.67■□□□□ 0.1
SNORD88C-201ENST00000408061 PTPRGP23470 1445 aa15.67■□□□□ 0.1
SNORD88C-201ENST00000408061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNORD88C-201ENST00000408061 ABCA8O94911 1581 aa15.65■□□□□ 0.1
SNORD88C-201ENST00000408061 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
SNORD88C-201ENST00000408061 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
SNORD88C-201ENST00000408061 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
SNORD88C-201ENST00000408061 NUP153P49790 1475 aaKnown RBP15.63■□□□□ 0.09
SNORD88C-201ENST00000408061 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
SNORD88C-201ENST00000408061 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
SNORD88C-201ENST00000408061 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
SNORD88C-201ENST00000408061 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
SNORD88C-201ENST00000408061 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
SNORD88C-201ENST00000408061 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
SNORD88C-201ENST00000408061 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
SNORD88C-201ENST00000408061 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
SNORD88C-201ENST00000408061 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
SNORD88C-201ENST00000408061 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
SNORD88C-201ENST00000408061 MYOM3Q5VTT5 1437 aa15.54■□□□□ 0.08
SNORD88C-201ENST00000408061 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
SNORD88C-201ENST00000408061 ATP10BO94823 1461 aa15.53■□□□□ 0.08
SNORD88C-201ENST00000408061 MIA2Q96PC5 1412 aa15.53■□□□□ 0.08
SNORD88C-201ENST00000408061 MAGI3Q5TCQ9 1506 aa15.53■□□□□ 0.08
SNORD88C-201ENST00000408061 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 HRCP23327 699 aa15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
SNORD88C-201ENST00000408061 ADCY10Q96PN6 1610 aa15.51■□□□□ 0.07
SNORD88C-201ENST00000408061 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
SNORD88C-201ENST00000408061 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.07
SNORD88C-201ENST00000408061 KDM5BQ9UGL1 1544 aa15.45■□□□□ 0.06
SNORD88C-201ENST00000408061 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
SNORD88C-201ENST00000408061 ACIN1Q9UKV3 1341 aaKnown RBP15.44■□□□□ 0.06
SNORD88C-201ENST00000408061 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
SNORD88C-201ENST00000408061 KIF14Q15058 1648 aa15.43■□□□□ 0.06
SNORD88C-201ENST00000408061 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
SNORD88C-201ENST00000408061 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
SNORD88C-201ENST00000408061 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
SNORD88C-201ENST00000408061 CLSPNQ9HAW4 1339 aa15.39■□□□□ 0.05
SNORD88C-201ENST00000408061 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
SNORD88C-201ENST00000408061 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
SNORD88C-201ENST00000408061 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
SNORD88C-201ENST00000408061 SETD5Q9C0A6 1442 aa15.36■□□□□ 0.05
SNORD88C-201ENST00000408061 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
SNORD88C-201ENST00000408061 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
SNORD88C-201ENST00000408061 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNORD88C-201ENST00000408061 RSPH4AQ5TD94 716 aa15.34■□□□□ 0.05
SNORD88C-201ENST00000408061 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.04
SNORD88C-201ENST00000408061 ITGAEP38570 1179 aa15.32■□□□□ 0.04
SNORD88C-201ENST00000408061 HFM1A2PYH4 1435 aa15.31■□□□□ 0.04
SNORD88C-201ENST00000408061 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
SNORD88C-201ENST00000408061 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
SNORD88C-201ENST00000408061 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
SNORD88C-201ENST00000408061 ARAP3Q8WWN8 1544 aa15.28■□□□□ 0.04
SNORD88C-201ENST00000408061 PLEKHH2Q8IVE3 1493 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms