RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
COL23A1-202ENST00000407622 MIER1Q8N108 512 aa24.48■■□□□ 1.51
COL23A1-202ENST00000407622 WDR62O43379 1518 aa24.48■■□□□ 1.51
COL23A1-202ENST00000407622 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
COL23A1-202ENST00000407622 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
COL23A1-202ENST00000407622 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
COL23A1-202ENST00000407622 CLSPNQ9HAW4 1339 aa24.43■■□□□ 1.5
COL23A1-202ENST00000407622 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
COL23A1-202ENST00000407622 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
COL23A1-202ENST00000407622 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
COL23A1-202ENST00000407622 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
COL23A1-202ENST00000407622 ITGAEP38570 1179 aa24.4■■□□□ 1.5
COL23A1-202ENST00000407622 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.49
COL23A1-202ENST00000407622 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
COL23A1-202ENST00000407622 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
COL23A1-202ENST00000407622 MAP3K1Q13233 1512 aa24.33■■□□□ 1.49
COL23A1-202ENST00000407622 P3H3Q8IVL6 736 aa24.33■■□□□ 1.48
COL23A1-202ENST00000407622 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
COL23A1-202ENST00000407622 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
COL23A1-202ENST00000407622 PCF11O94913 1555 aaKnown RBP24.3■■□□□ 1.48
COL23A1-202ENST00000407622 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
COL23A1-202ENST00000407622 PHLDB1Q86UU1 1377 aa24.28■■□□□ 1.48
COL23A1-202ENST00000407622 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.48
COL23A1-202ENST00000407622 RAB3GAP2Q9H2M9 1393 aa24.26■■□□□ 1.47
COL23A1-202ENST00000407622 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
COL23A1-202ENST00000407622 CUL7Q14999 1698 aa24.25■■□□□ 1.47
COL23A1-202ENST00000407622 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
COL23A1-202ENST00000407622 FHAD1B1AJZ9 1412 aa24.24■■□□□ 1.47
COL23A1-202ENST00000407622 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
COL23A1-202ENST00000407622 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
COL23A1-202ENST00000407622 MAPKBP1O60336 1514 aa24.19■■□□□ 1.46
COL23A1-202ENST00000407622 GRIN2BQ13224 1484 aa24.15■■□□□ 1.46
COL23A1-202ENST00000407622 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
COL23A1-202ENST00000407622 CTTNBP2Q8WZ74 1663 aa24.14■■□□□ 1.46
COL23A1-202ENST00000407622 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
COL23A1-202ENST00000407622 SETD5Q9C0A6 1442 aa24.13■■□□□ 1.45
COL23A1-202ENST00000407622 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
COL23A1-202ENST00000407622 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
COL23A1-202ENST00000407622 CASKIN1Q8WXD9 1431 aa24.09■■□□□ 1.45
COL23A1-202ENST00000407622 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
COL23A1-202ENST00000407622 ADAMTS12P58397 1594 aa24.04■■□□□ 1.44
COL23A1-202ENST00000407622 SNAPC4Q5SXM2 1469 aa24.01■■□□□ 1.43
COL23A1-202ENST00000407622 SIN3AQ96ST3 1273 aa23.99■■□□□ 1.43
COL23A1-202ENST00000407622 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
COL23A1-202ENST00000407622 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
COL23A1-202ENST00000407622 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
COL23A1-202ENST00000407622 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
COL23A1-202ENST00000407622 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
COL23A1-202ENST00000407622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.9■■□□□ 1.42
COL23A1-202ENST00000407622 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
COL23A1-202ENST00000407622 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
COL23A1-202ENST00000407622 SYNJ2O15056 1496 aa23.85■■□□□ 1.41
COL23A1-202ENST00000407622 PTPRKQ15262 1439 aa23.85■■□□□ 1.41
COL23A1-202ENST00000407622 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
COL23A1-202ENST00000407622 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
COL23A1-202ENST00000407622 FBLN2P98095 1184 aa23.79■■□□□ 1.4
COL23A1-202ENST00000407622 IQGAP2Q13576 1575 aa23.79■■□□□ 1.4
COL23A1-202ENST00000407622 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
COL23A1-202ENST00000407622 CCDC18Q5T9S5 1454 aa23.77■■□□□ 1.4
COL23A1-202ENST00000407622 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
COL23A1-202ENST00000407622 MYOM3Q5VTT5 1437 aa23.76■■□□□ 1.39
COL23A1-202ENST00000407622 MAGI3Q5TCQ9 1506 aa23.75■■□□□ 1.39
COL23A1-202ENST00000407622 PTPN23Q9H3S7 1636 aa23.75■■□□□ 1.39
COL23A1-202ENST00000407622 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
COL23A1-202ENST00000407622 SUPT6HQ7KZ85 1726 aaKnown RBP23.74■■□□□ 1.39
COL23A1-202ENST00000407622 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
COL23A1-202ENST00000407622 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
COL23A1-202ENST00000407622 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
COL23A1-202ENST00000407622 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
COL23A1-202ENST00000407622 TIMELESSQ9UNS1 1208 aa23.71■■□□□ 1.39
COL23A1-202ENST00000407622 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
COL23A1-202ENST00000407622 NUP160Q12769 1436 aa23.69■■□□□ 1.38
COL23A1-202ENST00000407622 NAIPQ13075 1403 aa23.69■■□□□ 1.38
COL23A1-202ENST00000407622 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
COL23A1-202ENST00000407622 UACAQ9BZF9 1416 aa23.68■■□□□ 1.38
COL23A1-202ENST00000407622 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
COL23A1-202ENST00000407622 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
COL23A1-202ENST00000407622 HECW1Q76N89 1606 aa23.61■■□□□ 1.37
COL23A1-202ENST00000407622 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
COL23A1-202ENST00000407622 CDK13Q14004 1512 aaKnown RBP23.6■■□□□ 1.37
COL23A1-202ENST00000407622 EPRSP07814 1512 aaKnown RBP23.59■■□□□ 1.37
COL23A1-202ENST00000407622 DISP1Q96F81 1524 aa23.59■■□□□ 1.37
COL23A1-202ENST00000407622 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
COL23A1-202ENST00000407622 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.36
COL23A1-202ENST00000407622 CHIC2Q9UKJ5 165 aa23.58■■□□□ 1.36
COL23A1-202ENST00000407622 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
COL23A1-202ENST00000407622 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
COL23A1-202ENST00000407622 CHD1O14646 1710 aa23.54■■□□□ 1.36
COL23A1-202ENST00000407622 KIAA0556O60303 1618 aa23.54■■□□□ 1.36
COL23A1-202ENST00000407622 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
COL23A1-202ENST00000407622 KDM6BO15054 1643 aa23.52■■□□□ 1.36
COL23A1-202ENST00000407622 DENND4BO75064 1496 aaPredicted RBP23.51■■□□□ 1.35
COL23A1-202ENST00000407622 GCC2Q8IWJ2 1684 aa23.51■■□□□ 1.35
COL23A1-202ENST00000407622 CARMIL2Q6F5E8 1435 aa23.45■■□□□ 1.34
COL23A1-202ENST00000407622 MIA2Q96PC5 1412 aa23.42■■□□□ 1.34
COL23A1-202ENST00000407622 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
COL23A1-202ENST00000407622 AKNAQ7Z591 1439 aa23.41■■□□□ 1.34
COL23A1-202ENST00000407622 ANP32CO43423 234 aa23.4■■□□□ 1.34
COL23A1-202ENST00000407622 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
COL23A1-202ENST00000407622 CCER2I3L3R5 266 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms