RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 NISCHQ9Y2I1 1504 aa34.73■■■■□ 3.15
COL23A1-202ENST00000407622 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
COL23A1-202ENST00000407622 SHROOM4Q9ULL8 1493 aa29.52■■■□□ 2.32
COL23A1-202ENST00000407622 ZCCHC6Q5VYS8 1495 aaKnown RBP29.28■■■□□ 2.28
COL23A1-202ENST00000407622 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
COL23A1-202ENST00000407622 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
COL23A1-202ENST00000407622 DCAF1Q9Y4B6 1507 aa28.68■■■□□ 2.18
COL23A1-202ENST00000407622 ABCC9O60706 1549 aa28.66■■■□□ 2.18
COL23A1-202ENST00000407622 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
COL23A1-202ENST00000407622 NACADO15069 1562 aa28.17■■■□□ 2.1
COL23A1-202ENST00000407622 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
COL23A1-202ENST00000407622 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
COL23A1-202ENST00000407622 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
COL23A1-202ENST00000407622 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
COL23A1-202ENST00000407622 UNC13AQ9UPW8 1703 aa27.33■■□□□ 1.97
COL23A1-202ENST00000407622 LOC105371045A0A1W2PR82 267 aa27.27■■□□□ 1.96
COL23A1-202ENST00000407622 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
COL23A1-202ENST00000407622 HRCP23327 699 aa27.12■■□□□ 1.93
COL23A1-202ENST00000407622 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
COL23A1-202ENST00000407622 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
COL23A1-202ENST00000407622 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
COL23A1-202ENST00000407622 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
COL23A1-202ENST00000407622 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
COL23A1-202ENST00000407622 WIZO95785 1651 aa26.81■■□□□ 1.88
COL23A1-202ENST00000407622 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
COL23A1-202ENST00000407622 FAM9AQ8IZU1 332 aaPredicted RBP26.71■■□□□ 1.87
COL23A1-202ENST00000407622 SMARCA4P51532 1647 aa26.66■■□□□ 1.86
COL23A1-202ENST00000407622 PPARGC1BQ86YN6 1023 aaKnown RBP26.65■■□□□ 1.86
COL23A1-202ENST00000407622 TRIM26Q12899 539 aaPredicted RBP26.61■■□□□ 1.85
COL23A1-202ENST00000407622 EHMT2Q96KQ7 1210 aa26.51■■□□□ 1.83
COL23A1-202ENST00000407622 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
COL23A1-202ENST00000407622 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
COL23A1-202ENST00000407622 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
COL23A1-202ENST00000407622 ATAD2BQ9ULI0 1458 aa26.27■■□□□ 1.8
COL23A1-202ENST00000407622 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
COL23A1-202ENST00000407622 SMARCA2P51531 1590 aa26.22■■□□□ 1.79
COL23A1-202ENST00000407622 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
COL23A1-202ENST00000407622 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
COL23A1-202ENST00000407622 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
COL23A1-202ENST00000407622 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
COL23A1-202ENST00000407622 ZEB1P37275 1124 aaPredicted RBP25.93■■□□□ 1.74
COL23A1-202ENST00000407622 SOGA1O94964 1423 aa25.93■■□□□ 1.74
COL23A1-202ENST00000407622 CC2D2AQ9P2K1 1620 aa25.9■■□□□ 1.74
COL23A1-202ENST00000407622 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.73
COL23A1-202ENST00000407622 CEP162Q5TB80 1403 aa25.76■■□□□ 1.72
COL23A1-202ENST00000407622 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
COL23A1-202ENST00000407622 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
COL23A1-202ENST00000407622 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
COL23A1-202ENST00000407622 EEA1Q15075 1411 aa25.69■■□□□ 1.7
COL23A1-202ENST00000407622 TTBK1Q5TCY1 1321 aaPredicted RBP25.65■■□□□ 1.7
COL23A1-202ENST00000407622 SYNJ1O43426 1573 aa25.64■■□□□ 1.69
COL23A1-202ENST00000407622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.62■■□□□ 1.69
COL23A1-202ENST00000407622 UBTFP17480 764 aaKnown RBP25.6■■□□□ 1.69
COL23A1-202ENST00000407622 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
COL23A1-202ENST00000407622 CCER1Q8TC90 406 aaPredicted RBP25.48■■□□□ 1.67
COL23A1-202ENST00000407622 CFTRP13569 1480 aa25.47■■□□□ 1.67
COL23A1-202ENST00000407622 KIF21BO75037 1637 aa25.41■■□□□ 1.66
COL23A1-202ENST00000407622 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
COL23A1-202ENST00000407622 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.66
COL23A1-202ENST00000407622 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
COL23A1-202ENST00000407622 RAPGEF2Q9Y4G8 1499 aa25.29■■□□□ 1.64
COL23A1-202ENST00000407622 TOP2BQ02880 1626 aa25.29■■□□□ 1.64
COL23A1-202ENST00000407622 CLIP1P30622 1438 aa25.27■■□□□ 1.64
COL23A1-202ENST00000407622 PRDM2Q13029 1718 aa25.2■■□□□ 1.63
COL23A1-202ENST00000407622 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
COL23A1-202ENST00000407622 NESP48681 1621 aa25.18■■□□□ 1.62
COL23A1-202ENST00000407622 VPS8Q8N3P4 1428 aa25.16■■□□□ 1.62
COL23A1-202ENST00000407622 RANGAP1P46060 587 aaPredicted RBP25.15■■□□□ 1.62
COL23A1-202ENST00000407622 LAMC3Q9Y6N6 1575 aa25.11■■□□□ 1.61
COL23A1-202ENST00000407622 CUX1P39880 1505 aa25.1■■□□□ 1.61
COL23A1-202ENST00000407622 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
COL23A1-202ENST00000407622 HNRNPUL2Q1KMD3 747 aaKnown RBP25.04■■□□□ 1.6
COL23A1-202ENST00000407622 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
COL23A1-202ENST00000407622 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
COL23A1-202ENST00000407622 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
COL23A1-202ENST00000407622 DIEXFQ68CQ4 756 aaKnown RBP24.97■■□□□ 1.59
COL23A1-202ENST00000407622 APLP2Q06481 763 aa24.96■■□□□ 1.59
COL23A1-202ENST00000407622 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.58
COL23A1-202ENST00000407622 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
COL23A1-202ENST00000407622 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
COL23A1-202ENST00000407622 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
COL23A1-202ENST00000407622 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
COL23A1-202ENST00000407622 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
COL23A1-202ENST00000407622 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
COL23A1-202ENST00000407622 ZNF316A6NFI3 1004 aaPredicted RBP24.79■■□□□ 1.56
COL23A1-202ENST00000407622 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
COL23A1-202ENST00000407622 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
COL23A1-202ENST00000407622 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
COL23A1-202ENST00000407622 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
COL23A1-202ENST00000407622 POLA1P09884 1462 aaPredicted RBP24.71■■□□□ 1.55
COL23A1-202ENST00000407622 ARHGAP35Q9NRY4 1499 aa24.7■■□□□ 1.54
COL23A1-202ENST00000407622 CUX2O14529 1486 aa24.69■■□□□ 1.54
COL23A1-202ENST00000407622 IGF1RP08069 1367 aa24.65■■□□□ 1.54
COL23A1-202ENST00000407622 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.54
COL23A1-202ENST00000407622 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
COL23A1-202ENST00000407622 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
COL23A1-202ENST00000407622 RRBP1Q9P2E9 1410 aaKnown RBP24.57■■□□□ 1.52
COL23A1-202ENST00000407622 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
COL23A1-202ENST00000407622 ERCC6Q03468 1493 aa24.55■■□□□ 1.52
COL23A1-202ENST00000407622 CENPBP07199 599 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms