RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ANP32CO43423 234 aa22■■□□□ 1.11
CCDC85A-201ENST00000407595 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
CCDC85A-201ENST00000407595 KCNH8Q96L42 1107 aa21.97■■□□□ 1.11
CCDC85A-201ENST00000407595 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
CCDC85A-201ENST00000407595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCDC85A-201ENST00000407595 ANP32EQ9BTT0 268 aa21.92■■□□□ 1.1
CCDC85A-201ENST00000407595 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
CCDC85A-201ENST00000407595 NESP48681 1621 aa21.9■■□□□ 1.1
CCDC85A-201ENST00000407595 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
CCDC85A-201ENST00000407595 TONSLQ96HA7 1378 aa21.88■■□□□ 1.09
CCDC85A-201ENST00000407595 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
CCDC85A-201ENST00000407595 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
CCDC85A-201ENST00000407595 SLC4A1APQ9BWU0 796 aaKnown RBP21.86■■□□□ 1.09
CCDC85A-201ENST00000407595 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
CCDC85A-201ENST00000407595 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
CCDC85A-201ENST00000407595 IGF1RP08069 1367 aa21.83■■□□□ 1.08
CCDC85A-201ENST00000407595 UNC13AQ9UPW8 1703 aa21.82■■□□□ 1.08
CCDC85A-201ENST00000407595 IRX6P78412 446 aaPredicted RBP21.81■■□□□ 1.08
CCDC85A-201ENST00000407595 TSHZ2Q9NRE2 1034 aa21.81■■□□□ 1.08
CCDC85A-201ENST00000407595 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
CCDC85A-201ENST00000407595 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
CCDC85A-201ENST00000407595 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
CCDC85A-201ENST00000407595 PLEKHD1A6NEE1 506 aa21.76■■□□□ 1.07
CCDC85A-201ENST00000407595 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
CCDC85A-201ENST00000407595 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.07
CCDC85A-201ENST00000407595 TSPY4P0CV99 314 aa21.73■■□□□ 1.07
CCDC85A-201ENST00000407595 TSPY10P0CW01 314 aa21.73■■□□□ 1.07
CCDC85A-201ENST00000407595 FOXD1Q16676 465 aa21.73■■□□□ 1.07
CCDC85A-201ENST00000407595 SENP3-EIF4A1A0A087X0R7 540 aa21.72■■□□□ 1.07
CCDC85A-201ENST00000407595 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
CCDC85A-201ENST00000407595 CFTRP13569 1480 aa21.68■■□□□ 1.06
CCDC85A-201ENST00000407595 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
CCDC85A-201ENST00000407595 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
CCDC85A-201ENST00000407595 RGL3Q3MIN7 710 aa21.64■■□□□ 1.05
CCDC85A-201ENST00000407595 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
CCDC85A-201ENST00000407595 CUX1P39880 1505 aa21.62■■□□□ 1.05
CCDC85A-201ENST00000407595 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.05
CCDC85A-201ENST00000407595 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
CCDC85A-201ENST00000407595 NPM1P06748 294 aaKnown RBP eCLIP21.59■■□□□ 1.05
CCDC85A-201ENST00000407595 RAB3GAP2Q9H2M9 1393 aa21.59■■□□□ 1.05
CCDC85A-201ENST00000407595 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.05
CCDC85A-201ENST00000407595 FAM9BQ8IZU0 186 aa21.56■■□□□ 1.04
CCDC85A-201ENST00000407595 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
CCDC85A-201ENST00000407595 RTL5Q5HYW3 569 aaPredicted RBP21.54■■□□□ 1.04
CCDC85A-201ENST00000407595 KIF21BO75037 1637 aa21.53■■□□□ 1.04
CCDC85A-201ENST00000407595 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
CCDC85A-201ENST00000407595 SALL2Q9Y467 1007 aaPredicted RBP21.53■■□□□ 1.04
CCDC85A-201ENST00000407595 DHX57Q6P158 1386 aaKnown RBP21.52■■□□□ 1.04
CCDC85A-201ENST00000407595 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
CCDC85A-201ENST00000407595 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
CCDC85A-201ENST00000407595 NBR1Q14596 966 aa21.48■■□□□ 1.03
CCDC85A-201ENST00000407595 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
CCDC85A-201ENST00000407595 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
CCDC85A-201ENST00000407595 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
CCDC85A-201ENST00000407595 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
CCDC85A-201ENST00000407595 PRXQ9BXM0 1461 aa21.43■■□□□ 1.02
CCDC85A-201ENST00000407595 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
CCDC85A-201ENST00000407595 EIF4G2P78344 907 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC85A-201ENST00000407595 PHLDB1Q86UU1 1377 aa21.4■■□□□ 1.02
CCDC85A-201ENST00000407595 ZNF644Q9H582 1327 aaPredicted RBP21.4■■□□□ 1.02
CCDC85A-201ENST00000407595 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
CCDC85A-201ENST00000407595 HNRNPMP52272 730 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCDC85A-201ENST00000407595 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
CCDC85A-201ENST00000407595 MRS2Q9HD23 443 aa21.35■■□□□ 1.01
CCDC85A-201ENST00000407595 PEG3Q9GZU2 1588 aa21.33■■□□□ 1.01
CCDC85A-201ENST00000407595 PKD2Q13563 968 aa21.3■■□□□ 1
CCDC85A-201ENST00000407595 MPHOSPH9Q99550 1183 aa21.3■■□□□ 1
CCDC85A-201ENST00000407595 DAXXQ9UER7 740 aaPredicted RBP21.3■■□□□ 1
CCDC85A-201ENST00000407595 ANP32AP39687 249 aaKnown RBP21.3■■□□□ 1
CCDC85A-201ENST00000407595 B4GALNT3Q6L9W6 998 aa21.29■■□□□ 1
CCDC85A-201ENST00000407595 CARMIL2Q6F5E8 1435 aa21.27■■□□□ 1
CCDC85A-201ENST00000407595 DCAF11Q8TEB1 546 aa21.25■□□□□ 0.99
CCDC85A-201ENST00000407595 CCDC136Q96JN2 1154 aa21.25■□□□□ 0.99
CCDC85A-201ENST00000407595 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
CCDC85A-201ENST00000407595 CCER2I3L3R5 266 aa21.24■□□□□ 0.99
CCDC85A-201ENST00000407595 CARD11Q9BXL7 1154 aa21.24■□□□□ 0.99
CCDC85A-201ENST00000407595 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
CCDC85A-201ENST00000407595 L3MBTL2Q969R5 705 aa21.22■□□□□ 0.99
CCDC85A-201ENST00000407595 TMC1Q8TDI8 760 aa21.21■□□□□ 0.99
CCDC85A-201ENST00000407595 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.98
CCDC85A-201ENST00000407595 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
CCDC85A-201ENST00000407595 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
CCDC85A-201ENST00000407595 PPP4R2Q9NY27 417 aa21.16■□□□□ 0.98
CCDC85A-201ENST00000407595 NUP155O75694 1391 aa21.16■□□□□ 0.98
CCDC85A-201ENST00000407595 ZBTB47Q9UFB7 747 aaPredicted RBP21.15■□□□□ 0.98
CCDC85A-201ENST00000407595 ESF1Q9H501 851 aaKnown RBP21.14■□□□□ 0.98
CCDC85A-201ENST00000407595 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
CCDC85A-201ENST00000407595 GGT6Q6P531 493 aa21.12■□□□□ 0.97
CCDC85A-201ENST00000407595 PTPRGP23470 1445 aa21.11■□□□□ 0.97
CCDC85A-201ENST00000407595 DEKP35659 375 aaKnown RBP21.09■□□□□ 0.97
CCDC85A-201ENST00000407595 FGD6Q6ZV73 1430 aa21.09■□□□□ 0.97
CCDC85A-201ENST00000407595 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
CCDC85A-201ENST00000407595 MLECQ14165 292 aa21.08■□□□□ 0.97
CCDC85A-201ENST00000407595 TIMELESSQ9UNS1 1208 aa21.08■□□□□ 0.97
CCDC85A-201ENST00000407595 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
CCDC85A-201ENST00000407595 CCDC18Q5T9S5 1454 aa21.06■□□□□ 0.96
CCDC85A-201ENST00000407595 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
CCDC85A-201ENST00000407595 MRC2Q9UBG0 1479 aa21.05■□□□□ 0.96
CCDC85A-201ENST00000407595 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
CCDC85A-201ENST00000407595 NOP58Q9Y2X3 529 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms