RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
CCDC85A-201ENST00000407595 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.15
CCDC85A-201ENST00000407595 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
CCDC85A-201ENST00000407595 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
CCDC85A-201ENST00000407595 EHMT2Q96KQ7 1210 aa26.06■■□□□ 1.76
CCDC85A-201ENST00000407595 PCGF6Q9BYE7 350 aa25.6■■□□□ 1.69
CCDC85A-201ENST00000407595 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
CCDC85A-201ENST00000407595 ABCC9O60706 1549 aa25.32■■□□□ 1.64
CCDC85A-201ENST00000407595 HRCP23327 699 aa25.2■■□□□ 1.62
CCDC85A-201ENST00000407595 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
CCDC85A-201ENST00000407595 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
CCDC85A-201ENST00000407595 TTBK1Q5TCY1 1321 aaPredicted RBP25■■□□□ 1.59
CCDC85A-201ENST00000407595 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
CCDC85A-201ENST00000407595 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
CCDC85A-201ENST00000407595 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
CCDC85A-201ENST00000407595 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.56
CCDC85A-201ENST00000407595 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
CCDC85A-201ENST00000407595 CCDC180Q9P1Z9 1646 aa24.48■■□□□ 1.51
CCDC85A-201ENST00000407595 TRIM26Q12899 539 aaPredicted RBP24.43■■□□□ 1.5
CCDC85A-201ENST00000407595 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
CCDC85A-201ENST00000407595 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
CCDC85A-201ENST00000407595 ZEB1P37275 1124 aaPredicted RBP24.32■■□□□ 1.48
CCDC85A-201ENST00000407595 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
CCDC85A-201ENST00000407595 APLP2Q06481 763 aa24.21■■□□□ 1.47
CCDC85A-201ENST00000407595 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
CCDC85A-201ENST00000407595 CCER1Q8TC90 406 aaPredicted RBP24.1■■□□□ 1.45
CCDC85A-201ENST00000407595 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
CCDC85A-201ENST00000407595 CENPBP07199 599 aaPredicted RBP23.9■■□□□ 1.42
CCDC85A-201ENST00000407595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
CCDC85A-201ENST00000407595 YTHDC1Q96MU7 727 aaKnown RBP23.79■■□□□ 1.4
CCDC85A-201ENST00000407595 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
CCDC85A-201ENST00000407595 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
CCDC85A-201ENST00000407595 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
CCDC85A-201ENST00000407595 ITGAEP38570 1179 aa23.63■■□□□ 1.37
CCDC85A-201ENST00000407595 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
CCDC85A-201ENST00000407595 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
CCDC85A-201ENST00000407595 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
CCDC85A-201ENST00000407595 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
CCDC85A-201ENST00000407595 GTF3C3Q9Y5Q9 886 aa23.51■■□□□ 1.35
CCDC85A-201ENST00000407595 NACADO15069 1562 aa23.49■■□□□ 1.35
CCDC85A-201ENST00000407595 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
CCDC85A-201ENST00000407595 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
CCDC85A-201ENST00000407595 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
CCDC85A-201ENST00000407595 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
CCDC85A-201ENST00000407595 MYT1Q01538 1121 aa23.29■■□□□ 1.32
CCDC85A-201ENST00000407595 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
CCDC85A-201ENST00000407595 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
CCDC85A-201ENST00000407595 FBLN2P98095 1184 aa23.04■■□□□ 1.28
CCDC85A-201ENST00000407595 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
CCDC85A-201ENST00000407595 WIZO95785 1651 aa23.01■■□□□ 1.27
CCDC85A-201ENST00000407595 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
CCDC85A-201ENST00000407595 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
CCDC85A-201ENST00000407595 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
CCDC85A-201ENST00000407595 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
CCDC85A-201ENST00000407595 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
CCDC85A-201ENST00000407595 SOGA1O94964 1423 aa22.88■■□□□ 1.25
CCDC85A-201ENST00000407595 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
CCDC85A-201ENST00000407595 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
CCDC85A-201ENST00000407595 MIER1Q8N108 512 aa22.72■■□□□ 1.23
CCDC85A-201ENST00000407595 CEP162Q5TB80 1403 aa22.7■■□□□ 1.22
CCDC85A-201ENST00000407595 CLIP1P30622 1438 aa22.64■■□□□ 1.22
CCDC85A-201ENST00000407595 BCANQ96GW7 911 aa22.62■■□□□ 1.21
CCDC85A-201ENST00000407595 NEFLP07196 543 aa22.61■■□□□ 1.21
CCDC85A-201ENST00000407595 MYT1LQ9UL68 1186 aa22.6■■□□□ 1.21
CCDC85A-201ENST00000407595 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
CCDC85A-201ENST00000407595 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
CCDC85A-201ENST00000407595 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
CCDC85A-201ENST00000407595 SMARCA4P51532 1647 aa22.54■■□□□ 1.2
CCDC85A-201ENST00000407595 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
CCDC85A-201ENST00000407595 TOP2AP11388 1531 aaKnown RBP22.51■■□□□ 1.19
CCDC85A-201ENST00000407595 ERICH6Q7L0X2 663 aa22.5■■□□□ 1.19
CCDC85A-201ENST00000407595 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
CCDC85A-201ENST00000407595 TNIKQ9UKE5 1360 aa22.46■■□□□ 1.19
CCDC85A-201ENST00000407595 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
CCDC85A-201ENST00000407595 CHIC2Q9UKJ5 165 aa22.41■■□□□ 1.18
CCDC85A-201ENST00000407595 EEA1Q15075 1411 aa22.4■■□□□ 1.18
CCDC85A-201ENST00000407595 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
CCDC85A-201ENST00000407595 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
CCDC85A-201ENST00000407595 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
CCDC85A-201ENST00000407595 CUX2O14529 1486 aa22.34■■□□□ 1.17
CCDC85A-201ENST00000407595 ZNF326Q5BKZ1 582 aaKnown RBP22.33■■□□□ 1.17
CCDC85A-201ENST00000407595 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
CCDC85A-201ENST00000407595 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
CCDC85A-201ENST00000407595 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
CCDC85A-201ENST00000407595 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
CCDC85A-201ENST00000407595 CARMIL1Q5VZK9 1371 aa22.22■■□□□ 1.15
CCDC85A-201ENST00000407595 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
CCDC85A-201ENST00000407595 RAPGEF2Q9Y4G8 1499 aa22.19■■□□□ 1.14
CCDC85A-201ENST00000407595 FKBP8Q14318 412 aa22.18■■□□□ 1.14
CCDC85A-201ENST00000407595 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
CCDC85A-201ENST00000407595 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
CCDC85A-201ENST00000407595 RRP7BPQ9NSQ0 103 aa22.14■■□□□ 1.14
CCDC85A-201ENST00000407595 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
CCDC85A-201ENST00000407595 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
CCDC85A-201ENST00000407595 BICRAQ9NZM4 1560 aa22.07■■□□□ 1.12
CCDC85A-201ENST00000407595 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
CCDC85A-201ENST00000407595 CDK11AQ9UQ88 783 aaPredicted RBP22.04■■□□□ 1.12
CCDC85A-201ENST00000407595 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
CCDC85A-201ENST00000407595 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
CCDC85A-201ENST00000407595 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms