RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 TIAM1Q13009 1591 aa25.12■■□□□ 1.61
PIKFYVE-204ENST00000407449 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
PIKFYVE-204ENST00000407449 PBRM1Q86U86 1689 aa25.11■■□□□ 1.61
PIKFYVE-204ENST00000407449 PCF11O94913 1555 aaKnown RBP25.07■■□□□ 1.6
PIKFYVE-204ENST00000407449 CFAP43Q8NDM7 1665 aa25.07■■□□□ 1.6
PIKFYVE-204ENST00000407449 WDR62O43379 1518 aa25.07■■□□□ 1.6
PIKFYVE-204ENST00000407449 HNRNPUL2Q1KMD3 747 aaKnown RBP25.06■■□□□ 1.6
PIKFYVE-204ENST00000407449 RRBP1Q9P2E9 1410 aaKnown RBP25.05■■□□□ 1.6
PIKFYVE-204ENST00000407449 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.6
PIKFYVE-204ENST00000407449 FHOD3Q2V2M9 1422 aa25.01■■□□□ 1.59
PIKFYVE-204ENST00000407449 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
PIKFYVE-204ENST00000407449 FYCO1Q9BQS8 1478 aa25■■□□□ 1.59
PIKFYVE-204ENST00000407449 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
PIKFYVE-204ENST00000407449 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
PIKFYVE-204ENST00000407449 LRRC9Q6ZRR7 1453 aa24.97■■□□□ 1.59
PIKFYVE-204ENST00000407449 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
PIKFYVE-204ENST00000407449 P3H3Q8IVL6 736 aa24.94■■□□□ 1.58
PIKFYVE-204ENST00000407449 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
PIKFYVE-204ENST00000407449 FMN1Q68DA7 1419 aa24.93■■□□□ 1.58
PIKFYVE-204ENST00000407449 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
PIKFYVE-204ENST00000407449 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
PIKFYVE-204ENST00000407449 ERCC6Q03468 1493 aa24.88■■□□□ 1.57
PIKFYVE-204ENST00000407449 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
PIKFYVE-204ENST00000407449 ZNF608Q9ULD9 1512 aaPredicted RBP24.84■■□□□ 1.57
PIKFYVE-204ENST00000407449 IQGAP2Q13576 1575 aa24.83■■□□□ 1.56
PIKFYVE-204ENST00000407449 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
PIKFYVE-204ENST00000407449 PHLDB1Q86UU1 1377 aa24.77■■□□□ 1.56
PIKFYVE-204ENST00000407449 LRRIQ1Q96JM4 1722 aa24.76■■□□□ 1.55
PIKFYVE-204ENST00000407449 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
PIKFYVE-204ENST00000407449 CLSPNQ9HAW4 1339 aa24.71■■□□□ 1.55
PIKFYVE-204ENST00000407449 UGGT2Q9NYU1 1516 aa24.7■■□□□ 1.54
PIKFYVE-204ENST00000407449 DHX57Q6P158 1386 aaKnown RBP24.69■■□□□ 1.54
PIKFYVE-204ENST00000407449 HECW1Q76N89 1606 aa24.66■■□□□ 1.54
PIKFYVE-204ENST00000407449 MAGI1Q96QZ7 1491 aaPredicted RBP24.66■■□□□ 1.54
PIKFYVE-204ENST00000407449 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
PIKFYVE-204ENST00000407449 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.54
PIKFYVE-204ENST00000407449 KIAA0586Q9BVV6 1533 aa24.64■■□□□ 1.53
PIKFYVE-204ENST00000407449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.64■■□□□ 1.53
PIKFYVE-204ENST00000407449 EHBP1L1Q8N3D4 1523 aa24.63■■□□□ 1.53
PIKFYVE-204ENST00000407449 MTUS2Q5JR59 1369 aa24.62■■□□□ 1.53
PIKFYVE-204ENST00000407449 SUPT6HQ7KZ85 1726 aaKnown RBP24.6■■□□□ 1.53
PIKFYVE-204ENST00000407449 ITGAEP38570 1179 aa24.58■■□□□ 1.53
PIKFYVE-204ENST00000407449 KIAA0556O60303 1618 aa24.58■■□□□ 1.53
PIKFYVE-204ENST00000407449 SYNJ2O15056 1496 aa24.56■■□□□ 1.52
PIKFYVE-204ENST00000407449 FGD6Q6ZV73 1430 aa24.56■■□□□ 1.52
PIKFYVE-204ENST00000407449 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
PIKFYVE-204ENST00000407449 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
PIKFYVE-204ENST00000407449 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
PIKFYVE-204ENST00000407449 NCOA2Q15596 1464 aa24.53■■□□□ 1.52
PIKFYVE-204ENST00000407449 DISP1Q96F81 1524 aa24.53■■□□□ 1.52
PIKFYVE-204ENST00000407449 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
PIKFYVE-204ENST00000407449 EPRSP07814 1512 aaKnown RBP24.51■■□□□ 1.51
PIKFYVE-204ENST00000407449 MAGI3Q5TCQ9 1506 aa24.5■■□□□ 1.51
PIKFYVE-204ENST00000407449 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
PIKFYVE-204ENST00000407449 MYOM3Q5VTT5 1437 aa24.5■■□□□ 1.51
PIKFYVE-204ENST00000407449 ZNF316A6NFI3 1004 aaPredicted RBP24.48■■□□□ 1.51
PIKFYVE-204ENST00000407449 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
PIKFYVE-204ENST00000407449 NUP160Q12769 1436 aa24.43■■□□□ 1.5
PIKFYVE-204ENST00000407449 CDK13Q14004 1512 aaKnown RBP24.42■■□□□ 1.5
PIKFYVE-204ENST00000407449 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
PIKFYVE-204ENST00000407449 DIEXFQ68CQ4 756 aaKnown RBP24.41■■□□□ 1.5
PIKFYVE-204ENST00000407449 PTPN23Q9H3S7 1636 aa24.41■■□□□ 1.5
PIKFYVE-204ENST00000407449 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
PIKFYVE-204ENST00000407449 TCOF1Q13428 1488 aaKnown RBP24.36■■□□□ 1.49
PIKFYVE-204ENST00000407449 NUP153P49790 1475 aaKnown RBP24.34■■□□□ 1.49
PIKFYVE-204ENST00000407449 HFM1A2PYH4 1435 aa24.31■■□□□ 1.48
PIKFYVE-204ENST00000407449 CARMIL2Q6F5E8 1435 aa24.31■■□□□ 1.48
PIKFYVE-204ENST00000407449 PTPRKQ15262 1439 aa24.3■■□□□ 1.48
PIKFYVE-204ENST00000407449 FBLN2P98095 1184 aa24.3■■□□□ 1.48
PIKFYVE-204ENST00000407449 MIA2Q96PC5 1412 aa24.29■■□□□ 1.48
PIKFYVE-204ENST00000407449 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
PIKFYVE-204ENST00000407449 GCC2Q8IWJ2 1684 aa24.22■■□□□ 1.47
PIKFYVE-204ENST00000407449 NAIPQ13075 1403 aa24.22■■□□□ 1.47
PIKFYVE-204ENST00000407449 PLB1Q6P1J6 1458 aa24.2■■□□□ 1.46
PIKFYVE-204ENST00000407449 ARID3CA6NKF2 412 aa24.19■■□□□ 1.46
PIKFYVE-204ENST00000407449 CDK11AQ9UQ88 783 aaPredicted RBP24.19■■□□□ 1.46
PIKFYVE-204ENST00000407449 AKNAQ7Z591 1439 aa24.19■■□□□ 1.46
PIKFYVE-204ENST00000407449 CHD1O14646 1710 aa24.18■■□□□ 1.46
PIKFYVE-204ENST00000407449 ADCY10Q96PN6 1610 aa24.17■■□□□ 1.46
PIKFYVE-204ENST00000407449 UACAQ9BZF9 1416 aa24.17■■□□□ 1.46
PIKFYVE-204ENST00000407449 ABCA8O94911 1581 aa24.16■■□□□ 1.46
PIKFYVE-204ENST00000407449 TROQ12816 1431 aaPredicted RBP24.16■■□□□ 1.46
PIKFYVE-204ENST00000407449 ITSN2Q9NZM3 1697 aa24.13■■□□□ 1.45
PIKFYVE-204ENST00000407449 DNMT1P26358 1616 aaKnown RBP24.11■■□□□ 1.45
PIKFYVE-204ENST00000407449 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
PIKFYVE-204ENST00000407449 PRG4Q92954 1404 aaPredicted RBP24.09■■□□□ 1.45
PIKFYVE-204ENST00000407449 KIF14Q15058 1648 aa24.06■■□□□ 1.44
PIKFYVE-204ENST00000407449 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
PIKFYVE-204ENST00000407449 DAPK1P53355 1430 aa24.05■■□□□ 1.44
PIKFYVE-204ENST00000407449 SIN3AQ96ST3 1273 aa24.04■■□□□ 1.44
PIKFYVE-204ENST00000407449 ROCK1Q13464 1354 aa24.02■■□□□ 1.44
PIKFYVE-204ENST00000407449 NEUROD1Q13562 356 aa24■■□□□ 1.43
PIKFYVE-204ENST00000407449 RRP7BPQ9NSQ0 103 aa24■■□□□ 1.43
PIKFYVE-204ENST00000407449 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
PIKFYVE-204ENST00000407449 ABCC5O15440 1437 aa24■■□□□ 1.43
PIKFYVE-204ENST00000407449 ATP10BO94823 1461 aa23.99■■□□□ 1.43
PIKFYVE-204ENST00000407449 CAMSAP2Q08AD1 1489 aa23.99■■□□□ 1.43
PIKFYVE-204ENST00000407449 KDM6BO15054 1643 aa23.99■■□□□ 1.43
PIKFYVE-204ENST00000407449 GPATCH8Q9UKJ3 1502 aaKnown RBP23.99■■□□□ 1.43
PIKFYVE-204ENST00000407449 PTPRGP23470 1445 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms