RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 PRXQ9BXM0 1461 aa23.36■■□□□ 1.33
LIMK2-204ENST00000406516 CHD1O14646 1710 aa23.36■■□□□ 1.33
LIMK2-204ENST00000406516 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
LIMK2-204ENST00000406516 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
LIMK2-204ENST00000406516 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
LIMK2-204ENST00000406516 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
LIMK2-204ENST00000406516 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.32
LIMK2-204ENST00000406516 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
LIMK2-204ENST00000406516 NUP160Q12769 1436 aa23.23■■□□□ 1.31
LIMK2-204ENST00000406516 CEP170Q5SW79 1584 aa23.22■■□□□ 1.31
LIMK2-204ENST00000406516 KIF21BO75037 1637 aa23.18■■□□□ 1.3
LIMK2-204ENST00000406516 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
LIMK2-204ENST00000406516 KIAA0586Q9BVV6 1533 aa23.11■■□□□ 1.29
LIMK2-204ENST00000406516 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
LIMK2-204ENST00000406516 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
LIMK2-204ENST00000406516 RANGAP1P46060 587 aaPredicted RBP23.05■■□□□ 1.28
LIMK2-204ENST00000406516 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
LIMK2-204ENST00000406516 CLIP1P30622 1438 aa23.01■■□□□ 1.27
LIMK2-204ENST00000406516 CTTNBP2Q8WZ74 1663 aa22.98■■□□□ 1.27
LIMK2-204ENST00000406516 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
LIMK2-204ENST00000406516 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
LIMK2-204ENST00000406516 ERCC6L2Q5T890 1561 aa22.95■■□□□ 1.26
LIMK2-204ENST00000406516 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
LIMK2-204ENST00000406516 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
LIMK2-204ENST00000406516 P3H3Q8IVL6 736 aa22.91■■□□□ 1.26
LIMK2-204ENST00000406516 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
LIMK2-204ENST00000406516 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
LIMK2-204ENST00000406516 DIEXFQ68CQ4 756 aaKnown RBP22.88■■□□□ 1.25
LIMK2-204ENST00000406516 DISP1Q96F81 1524 aa22.88■■□□□ 1.25
LIMK2-204ENST00000406516 HNRNPUL2Q1KMD3 747 aaKnown RBP22.86■■□□□ 1.25
LIMK2-204ENST00000406516 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
LIMK2-204ENST00000406516 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
LIMK2-204ENST00000406516 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
LIMK2-204ENST00000406516 CARMIL2Q6F5E8 1435 aa22.84■■□□□ 1.25
LIMK2-204ENST00000406516 APLP2Q06481 763 aa22.83■■□□□ 1.25
LIMK2-204ENST00000406516 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
LIMK2-204ENST00000406516 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
LIMK2-204ENST00000406516 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
LIMK2-204ENST00000406516 ARHGAP35Q9NRY4 1499 aa22.77■■□□□ 1.24
LIMK2-204ENST00000406516 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
LIMK2-204ENST00000406516 FHOD3Q2V2M9 1422 aa22.75■■□□□ 1.23
LIMK2-204ENST00000406516 PTPRGP23470 1445 aa22.75■■□□□ 1.23
LIMK2-204ENST00000406516 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
LIMK2-204ENST00000406516 ACIN1Q9UKV3 1341 aaKnown RBP22.7■■□□□ 1.22
LIMK2-204ENST00000406516 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
LIMK2-204ENST00000406516 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
LIMK2-204ENST00000406516 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
LIMK2-204ENST00000406516 UACAQ9BZF9 1416 aa22.59■■□□□ 1.21
LIMK2-204ENST00000406516 CENPBP07199 599 aaPredicted RBP22.58■■□□□ 1.2
LIMK2-204ENST00000406516 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
LIMK2-204ENST00000406516 FMN1Q68DA7 1419 aa22.55■■□□□ 1.2
LIMK2-204ENST00000406516 ATP1B4Q9UN42 357 aaPredicted RBP22.54■■□□□ 1.2
LIMK2-204ENST00000406516 ABCA8O94911 1581 aa22.53■■□□□ 1.2
LIMK2-204ENST00000406516 KANK4Q5T7N3 995 aaPredicted RBP22.52■■□□□ 1.2
LIMK2-204ENST00000406516 ADCY10Q96PN6 1610 aa22.51■■□□□ 1.19
LIMK2-204ENST00000406516 ABCC2Q92887 1545 aa22.5■■□□□ 1.19
LIMK2-204ENST00000406516 UHRF1BP1LA0JNW5 1464 aa22.49■■□□□ 1.19
LIMK2-204ENST00000406516 RAPGEF6Q8TEU7 1601 aa22.47■■□□□ 1.19
LIMK2-204ENST00000406516 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
LIMK2-204ENST00000406516 NUP153P49790 1475 aaKnown RBP22.45■■□□□ 1.19
LIMK2-204ENST00000406516 NPM1P06748 294 aaKnown RBP eCLIP22.45■■□□□ 1.18
LIMK2-204ENST00000406516 CASKIN1Q8WXD9 1431 aa22.44■■□□□ 1.18
LIMK2-204ENST00000406516 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
LIMK2-204ENST00000406516 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
LIMK2-204ENST00000406516 ATP10BO94823 1461 aa22.41■■□□□ 1.18
LIMK2-204ENST00000406516 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
LIMK2-204ENST00000406516 YTHDC1Q96MU7 727 aaKnown RBP22.4■■□□□ 1.18
LIMK2-204ENST00000406516 MIER1Q8N108 512 aa22.39■■□□□ 1.18
LIMK2-204ENST00000406516 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
LIMK2-204ENST00000406516 FYCO1Q9BQS8 1478 aa22.37■■□□□ 1.17
LIMK2-204ENST00000406516 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
LIMK2-204ENST00000406516 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
LIMK2-204ENST00000406516 RRBP1Q9P2E9 1410 aaKnown RBP22.36■■□□□ 1.17
LIMK2-204ENST00000406516 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
LIMK2-204ENST00000406516 ZCCHC11Q5TAX3 1644 aaKnown RBP22.34■■□□□ 1.17
LIMK2-204ENST00000406516 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
LIMK2-204ENST00000406516 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
LIMK2-204ENST00000406516 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
LIMK2-204ENST00000406516 CCNB3Q8WWL7 1395 aa22.29■■□□□ 1.16
LIMK2-204ENST00000406516 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.16
LIMK2-204ENST00000406516 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
LIMK2-204ENST00000406516 ITGAEP38570 1179 aa22.26■■□□□ 1.15
LIMK2-204ENST00000406516 MAPKBP1O60336 1514 aa22.25■■□□□ 1.15
LIMK2-204ENST00000406516 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
LIMK2-204ENST00000406516 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
LIMK2-204ENST00000406516 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
LIMK2-204ENST00000406516 MAGI3Q5TCQ9 1506 aa22.2■■□□□ 1.14
LIMK2-204ENST00000406516 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
LIMK2-204ENST00000406516 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
LIMK2-204ENST00000406516 FAM69CQ0P6D2 419 aa22.18■■□□□ 1.14
LIMK2-204ENST00000406516 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
LIMK2-204ENST00000406516 TROQ12816 1431 aaPredicted RBP22.15■■□□□ 1.14
LIMK2-204ENST00000406516 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
LIMK2-204ENST00000406516 MAP3K1Q13233 1512 aa22.12■■□□□ 1.13
LIMK2-204ENST00000406516 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
LIMK2-204ENST00000406516 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
LIMK2-204ENST00000406516 RAB3GAP2Q9H2M9 1393 aa22.09■■□□□ 1.13
LIMK2-204ENST00000406516 DIP2BQ9P265 1576 aa22.09■■□□□ 1.13
LIMK2-204ENST00000406516 KIF14Q15058 1648 aa22.06■■□□□ 1.12
LIMK2-204ENST00000406516 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms