RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
PARVB-204ENST00000406477 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.574e-8■■■■■ 34.1
PARVB-204ENST00000406477 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
PARVB-204ENST00000406477 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
PARVB-204ENST00000406477 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
PARVB-204ENST00000406477 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
PARVB-204ENST00000406477 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
PARVB-204ENST00000406477 EIF4G3O43432 1585 aaKnown RBP24.69■■□□□ 1.54
PARVB-204ENST00000406477 FMN1Q68DA7 1419 aa24.67■■□□□ 1.54
PARVB-204ENST00000406477 SAMD9Q5K651 1589 aa24.66■■□□□ 1.54
PARVB-204ENST00000406477 FHOD3Q2V2M9 1422 aa24.65■■□□□ 1.54
PARVB-204ENST00000406477 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
PARVB-204ENST00000406477 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
PARVB-204ENST00000406477 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
PARVB-204ENST00000406477 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
PARVB-204ENST00000406477 TIAM1Q13009 1591 aa24.62■■□□□ 1.53
PARVB-204ENST00000406477 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
PARVB-204ENST00000406477 KANK4Q5T7N3 995 aaPredicted RBP24.6■■□□□ 1.53
PARVB-204ENST00000406477 IQGAP2Q13576 1575 aa24.6■■□□□ 1.53
PARVB-204ENST00000406477 PCF11O94913 1555 aaKnown RBP24.58■■□□□ 1.53
PARVB-204ENST00000406477 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
PARVB-204ENST00000406477 KIAA0586Q9BVV6 1533 aa24.54■■□□□ 1.52
PARVB-204ENST00000406477 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
PARVB-204ENST00000406477 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
PARVB-204ENST00000406477 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
PARVB-204ENST00000406477 UGGT2Q9NYU1 1516 aa24.51■■□□□ 1.51
PARVB-204ENST00000406477 RRBP1Q9P2E9 1410 aaKnown RBP24.5■■□□□ 1.51
PARVB-204ENST00000406477 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
PARVB-204ENST00000406477 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
PARVB-204ENST00000406477 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
PARVB-204ENST00000406477 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
PARVB-204ENST00000406477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
PARVB-204ENST00000406477 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
PARVB-204ENST00000406477 NUP160Q12769 1436 aa24.37■■□□□ 1.49
PARVB-204ENST00000406477 CCDC18Q5T9S5 1454 aa24.37■■□□□ 1.49
PARVB-204ENST00000406477 HECW1Q76N89 1606 aa24.34■■□□□ 1.49
PARVB-204ENST00000406477 KIAA0556O60303 1618 aa24.33■■□□□ 1.49
PARVB-204ENST00000406477 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
PARVB-204ENST00000406477 FBLN2P98095 1184 aa24.33■■□□□ 1.48
PARVB-204ENST00000406477 DISP1Q96F81 1524 aa24.31■■□□□ 1.48
PARVB-204ENST00000406477 MTUS2Q5JR59 1369 aa24.31■■□□□ 1.48
PARVB-204ENST00000406477 CARMIL2Q6F5E8 1435 aa24.27■■□□□ 1.48
PARVB-204ENST00000406477 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
PARVB-204ENST00000406477 EHBP1L1Q8N3D4 1523 aa24.26■■□□□ 1.47
PARVB-204ENST00000406477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.25■■□□□ 1.47
PARVB-204ENST00000406477 LRRIQ1Q96JM4 1722 aa24.23■■□□□ 1.47
PARVB-204ENST00000406477 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
PARVB-204ENST00000406477 EPRSP07814 1512 aaKnown RBP24.21■■□□□ 1.47
PARVB-204ENST00000406477 SUPT6HQ7KZ85 1726 aaKnown RBP24.19■■□□□ 1.46
PARVB-204ENST00000406477 RAPGEF6Q8TEU7 1601 aa24.15■■□□□ 1.46
PARVB-204ENST00000406477 NCOA2Q15596 1464 aa24.14■■□□□ 1.46
PARVB-204ENST00000406477 FGD6Q6ZV73 1430 aa24.13■■□□□ 1.45
PARVB-204ENST00000406477 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
PARVB-204ENST00000406477 FAM50AQ14320 339 aaKnown RBP24.12■■□□□ 1.45
PARVB-204ENST00000406477 CDK11AQ9UQ88 783 aaPredicted RBP24.1■■□□□ 1.45
PARVB-204ENST00000406477 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
PARVB-204ENST00000406477 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
PARVB-204ENST00000406477 CHD1O14646 1710 aa24.08■■□□□ 1.44
PARVB-204ENST00000406477 NUP153P49790 1475 aaKnown RBP24.07■■□□□ 1.44
PARVB-204ENST00000406477 CDK13Q14004 1512 aaKnown RBP24.06■■□□□ 1.44
PARVB-204ENST00000406477 MAGI3Q5TCQ9 1506 aa24.06■■□□□ 1.44
PARVB-204ENST00000406477 ITGAEP38570 1179 aa24.06■■□□□ 1.44
PARVB-204ENST00000406477 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
PARVB-204ENST00000406477 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
PARVB-204ENST00000406477 MIA2Q96PC5 1412 aa24■■□□□ 1.43
PARVB-204ENST00000406477 DHX57Q6P158 1386 aaKnown RBP23.99■■□□□ 1.43
PARVB-204ENST00000406477 PLB1Q6P1J6 1458 aa23.97■■□□□ 1.43
PARVB-204ENST00000406477 ABCA8O94911 1581 aa23.97■■□□□ 1.43
PARVB-204ENST00000406477 SHROOM2Q13796 1616 aa23.96■■□□□ 1.43
PARVB-204ENST00000406477 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
PARVB-204ENST00000406477 RAB3GAP2Q9H2M9 1393 aa23.95■■□□□ 1.43
PARVB-204ENST00000406477 PTPN23Q9H3S7 1636 aa23.95■■□□□ 1.42
PARVB-204ENST00000406477 PTPRGP23470 1445 aa23.94■■□□□ 1.42
PARVB-204ENST00000406477 TROQ12816 1431 aaPredicted RBP23.94■■□□□ 1.42
PARVB-204ENST00000406477 ARID3CA6NKF2 412 aa23.91■■□□□ 1.42
PARVB-204ENST00000406477 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
PARVB-204ENST00000406477 ADCY10Q96PN6 1610 aa23.85■■□□□ 1.41
PARVB-204ENST00000406477 PLEKHD1A6NEE1 506 aa23.84■■□□□ 1.41
PARVB-204ENST00000406477 HFM1A2PYH4 1435 aa23.83■■□□□ 1.41
PARVB-204ENST00000406477 ATP10BO94823 1461 aa23.82■■□□□ 1.4
PARVB-204ENST00000406477 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
PARVB-204ENST00000406477 AKNAQ7Z591 1439 aa23.79■■□□□ 1.4
PARVB-204ENST00000406477 PTPRKQ15262 1439 aa23.79■■□□□ 1.4
PARVB-204ENST00000406477 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
PARVB-204ENST00000406477 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
PARVB-204ENST00000406477 KIF14Q15058 1648 aa23.74■■□□□ 1.39
PARVB-204ENST00000406477 NAIPQ13075 1403 aa23.73■■□□□ 1.39
PARVB-204ENST00000406477 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
PARVB-204ENST00000406477 CFDP1Q9UEE9 299 aaPredicted RBP23.7■■□□□ 1.38
PARVB-204ENST00000406477 ABCC2Q92887 1545 aa23.7■■□□□ 1.38
PARVB-204ENST00000406477 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
PARVB-204ENST00000406477 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
PARVB-204ENST00000406477 DAPK1P53355 1430 aa23.68■■□□□ 1.38
PARVB-204ENST00000406477 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
PARVB-204ENST00000406477 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
PARVB-204ENST00000406477 UHRF1BP1LA0JNW5 1464 aa23.67■■□□□ 1.38
PARVB-204ENST00000406477 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
PARVB-204ENST00000406477 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
PARVB-204ENST00000406477 CAMSAP2Q08AD1 1489 aa23.64■■□□□ 1.37
PARVB-204ENST00000406477 ABCC5O15440 1437 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms