RNA–Protein interactions for RNA: ENST00000405666.5

ESRRA-202, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-202ENST00000405666 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.594e-7■■■■■ 27.8
ESRRA-202ENST00000405666 EFCAB5A4FU69 1503 aa31.22■■■□□ 2.59
ESRRA-202ENST00000405666 IFT140Q96RY7 1462 aa31.21■■■□□ 2.59
ESRRA-202ENST00000405666 PBRM1Q86U86 1689 aa31.21■■■□□ 2.59
ESRRA-202ENST00000405666 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
ESRRA-202ENST00000405666 FHAD1B1AJZ9 1412 aa31.17■■■□□ 2.58
ESRRA-202ENST00000405666 MAP3K1Q13233 1512 aa31.15■■■□□ 2.58
ESRRA-202ENST00000405666 P3H3Q8IVL6 736 aa31.13■■■□□ 2.57
ESRRA-202ENST00000405666 FHOD3Q2V2M9 1422 aa31.13■■■□□ 2.57
ESRRA-202ENST00000405666 CCER1Q8TC90 406 aaPredicted RBP31.13■■■□□ 2.57
ESRRA-202ENST00000405666 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
ESRRA-202ENST00000405666 GRIN2BQ13224 1484 aa31.12■■■□□ 2.57
ESRRA-202ENST00000405666 THOC2Q8NI27 1593 aaKnown RBP31.12■■■□□ 2.57
ESRRA-202ENST00000405666 ADAMTS12P58397 1594 aa31.1■■■□□ 2.57
ESRRA-202ENST00000405666 TIAM1Q13009 1591 aa31.1■■■□□ 2.57
ESRRA-202ENST00000405666 PCF11O94913 1555 aaKnown RBP31.07■■■□□ 2.56
ESRRA-202ENST00000405666 HNRNPUL2Q1KMD3 747 aaKnown RBP31.05■■■□□ 2.56
ESRRA-202ENST00000405666 SAMD9Q5K651 1589 aa31.05■■■□□ 2.56
ESRRA-202ENST00000405666 RRBP1Q9P2E9 1410 aaKnown RBP31.01■■■□□ 2.55
ESRRA-202ENST00000405666 FYCO1Q9BQS8 1478 aa31■■■□□ 2.55
ESRRA-202ENST00000405666 CASKIN1Q8WXD9 1431 aa30.99■■■□□ 2.55
ESRRA-202ENST00000405666 LRRC9Q6ZRR7 1453 aa30.98■■■□□ 2.55
ESRRA-202ENST00000405666 FMN1Q68DA7 1419 aa30.97■■■□□ 2.55
ESRRA-202ENST00000405666 CFAP43Q8NDM7 1665 aa30.97■■■□□ 2.55
ESRRA-202ENST00000405666 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
ESRRA-202ENST00000405666 SNAPC4Q5SXM2 1469 aa30.91■■■□□ 2.54
ESRRA-202ENST00000405666 IQGAP2Q13576 1575 aa30.88■■■□□ 2.53
ESRRA-202ENST00000405666 CCNB3Q8WWL7 1395 aa30.87■■■□□ 2.53
ESRRA-202ENST00000405666 ATP1B4Q9UN42 357 aaPredicted RBP30.85■■■□□ 2.53
ESRRA-202ENST00000405666 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
ESRRA-202ENST00000405666 MAGI1Q96QZ7 1491 aaPredicted RBP30.78■■■□□ 2.52
ESRRA-202ENST00000405666 PHLDB1Q86UU1 1377 aa30.78■■■□□ 2.52
ESRRA-202ENST00000405666 UGGT2Q9NYU1 1516 aa30.75■■■□□ 2.51
ESRRA-202ENST00000405666 KIAA0586Q9BVV6 1533 aa30.74■■■□□ 2.51
ESRRA-202ENST00000405666 LRRIQ1Q96JM4 1722 aa30.71■■■□□ 2.51
ESRRA-202ENST00000405666 SYNJ2O15056 1496 aa30.68■■■□□ 2.5
ESRRA-202ENST00000405666 CHMP7Q8WUX9 453 aaPredicted RBP30.61■■■□□ 2.49
ESRRA-202ENST00000405666 DISP1Q96F81 1524 aa30.6■■■□□ 2.49
ESRRA-202ENST00000405666 MTUS2Q5JR59 1369 aa30.59■■■□□ 2.49
ESRRA-202ENST00000405666 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
ESRRA-202ENST00000405666 KIAA0556O60303 1618 aa30.57■■■□□ 2.49
ESRRA-202ENST00000405666 CCDC18Q5T9S5 1454 aa30.56■■■□□ 2.48
ESRRA-202ENST00000405666 HECW1Q76N89 1606 aa30.56■■■□□ 2.48
ESRRA-202ENST00000405666 ITGAEP38570 1179 aa30.54■■■□□ 2.48
ESRRA-202ENST00000405666 NUP160Q12769 1436 aa30.52■■■□□ 2.48
ESRRA-202ENST00000405666 DHX57Q6P158 1386 aaKnown RBP30.52■■■□□ 2.48
ESRRA-202ENST00000405666 SCAF1Q9H7N4 1312 aaKnown RBP30.52■■■□□ 2.48
ESRRA-202ENST00000405666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.51■■■□□ 2.471e-6■■■■□ 20.3
ESRRA-202ENST00000405666 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.47
ESRRA-202ENST00000405666 EPRSP07814 1512 aaKnown RBP30.49■■■□□ 2.47
ESRRA-202ENST00000405666 FBLN2P98095 1184 aa30.49■■■□□ 2.47
ESRRA-202ENST00000405666 FAM50AQ14320 339 aaKnown RBP30.49■■■□□ 2.47
ESRRA-202ENST00000405666 MAGI3Q5TCQ9 1506 aa30.48■■■□□ 2.47
ESRRA-202ENST00000405666 NCOA2Q15596 1464 aa30.47■■■□□ 2.47
ESRRA-202ENST00000405666 FGD6Q6ZV73 1430 aa30.47■■■□□ 2.47
ESRRA-202ENST00000405666 CLSPNQ9HAW4 1339 aa30.45■■■□□ 2.47
ESRRA-202ENST00000405666 SUPT6HQ7KZ85 1726 aaKnown RBP30.44■■■□□ 2.46
ESRRA-202ENST00000405666 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
ESRRA-202ENST00000405666 CDK13Q14004 1512 aaKnown RBP30.4■■■□□ 2.46
ESRRA-202ENST00000405666 RAB3GAP2Q9H2M9 1393 aa30.4■■■□□ 2.46
ESRRA-202ENST00000405666 MYOM3Q5VTT5 1437 aa30.39■■■□□ 2.46
ESRRA-202ENST00000405666 SETD5Q9C0A6 1442 aa30.36■■■□□ 2.45
ESRRA-202ENST00000405666 JPH4Q96JJ6 628 aa30.35■■■□□ 2.45
ESRRA-202ENST00000405666 NUP153P49790 1475 aaKnown RBP30.34■■■□□ 2.45
ESRRA-202ENST00000405666 RAPGEF6Q8TEU7 1601 aa30.33■■■□□ 2.45
ESRRA-202ENST00000405666 CARMIL2Q6F5E8 1435 aa30.3■■■□□ 2.44
ESRRA-202ENST00000405666 ARID3CA6NKF2 412 aa30.27■■■□□ 2.44
ESRRA-202ENST00000405666 PTPN23Q9H3S7 1636 aa30.23■■■□□ 2.43
ESRRA-202ENST00000405666 PLB1Q6P1J6 1458 aa30.22■■■□□ 2.43
ESRRA-202ENST00000405666 PTPRKQ15262 1439 aa30.22■■■□□ 2.43
ESRRA-202ENST00000405666 TCOF1Q13428 1488 aaKnown RBP30.19■■■□□ 2.42
ESRRA-202ENST00000405666 MAPKBP1O60336 1514 aa30.16■■■□□ 2.42
ESRRA-202ENST00000405666 CHD1O14646 1710 aa30.16■■■□□ 2.42
ESRRA-202ENST00000405666 MIA2Q96PC5 1412 aa30.15■■■□□ 2.42
ESRRA-202ENST00000405666 HFM1A2PYH4 1435 aa30.12■■■□□ 2.41
ESRRA-202ENST00000405666 CDK11AQ9UQ88 783 aaPredicted RBP30.12■■■□□ 2.41
ESRRA-202ENST00000405666 ZNF316A6NFI3 1004 aaPredicted RBP30.1■■■□□ 2.41
ESRRA-202ENST00000405666 ABCA8O94911 1581 aa30.09■■■□□ 2.41
ESRRA-202ENST00000405666 PRG4Q92954 1404 aaPredicted RBP30.08■■■□□ 2.41
ESRRA-202ENST00000405666 TROQ12816 1431 aaPredicted RBP30.06■■■□□ 2.4
ESRRA-202ENST00000405666 NAIPQ13075 1403 aa30.04■■■□□ 2.4
ESRRA-202ENST00000405666 DIEXFQ68CQ4 756 aaKnown RBP30■■■□□ 2.39
ESRRA-202ENST00000405666 SHROOM2Q13796 1616 aa29.99■■■□□ 2.39
ESRRA-202ENST00000405666 ADCY10Q96PN6 1610 aa29.96■■■□□ 2.39
ESRRA-202ENST00000405666 PTPRGP23470 1445 aa29.96■■■□□ 2.39
ESRRA-202ENST00000405666 ATP10BO94823 1461 aa29.95■■■□□ 2.39
ESRRA-202ENST00000405666 AKNAQ7Z591 1439 aa29.94■■■□□ 2.38
ESRRA-202ENST00000405666 KIF14Q15058 1648 aa29.92■■■□□ 2.38
ESRRA-202ENST00000405666 UACAQ9BZF9 1416 aa29.92■■■□□ 2.38
ESRRA-202ENST00000405666 CHIC2Q9UKJ5 165 aa29.89■■■□□ 2.38
ESRRA-202ENST00000405666 GCC2Q8IWJ2 1684 aa29.88■■■□□ 2.37
ESRRA-202ENST00000405666 GPATCH8Q9UKJ3 1502 aaKnown RBP29.88■■■□□ 2.37
ESRRA-202ENST00000405666 DAPK1P53355 1430 aa29.87■■■□□ 2.37
ESRRA-202ENST00000405666 ZNF644Q9H582 1327 aaPredicted RBP29.87■■■□□ 2.37
ESRRA-202ENST00000405666 RRP7BPQ9NSQ0 103 aa29.87■■■□□ 2.37
ESRRA-202ENST00000405666 DNMT1P26358 1616 aaKnown RBP29.86■■■□□ 2.37
ESRRA-202ENST00000405666 PLEKHD1A6NEE1 506 aa29.85■■■□□ 2.37
ESRRA-202ENST00000405666 ITSN2Q9NZM3 1697 aa29.85■■■□□ 2.37
ESRRA-202ENST00000405666 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
ESRRA-202ENST00000405666 ABCC5O15440 1437 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms