RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 RRBP1Q9P2E9 1410 aaKnown RBP26.85■■□□□ 1.89
CHTOP-205ENST00000403433 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.89
CHTOP-205ENST00000403433 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
CHTOP-205ENST00000403433 PCF11O94913 1555 aaKnown RBP26.81■■□□□ 1.88
CHTOP-205ENST00000403433 CFAP43Q8NDM7 1665 aa26.81■■□□□ 1.88
CHTOP-205ENST00000403433 MRC2Q9UBG0 1479 aa26.76■■□□□ 1.87
CHTOP-205ENST00000403433 FHOD3Q2V2M9 1422 aa26.75■■□□□ 1.87
CHTOP-205ENST00000403433 CCNB3Q8WWL7 1395 aa26.73■■□□□ 1.87
CHTOP-205ENST00000403433 LRRC9Q6ZRR7 1453 aa26.73■■□□□ 1.87
CHTOP-205ENST00000403433 FYCO1Q9BQS8 1478 aa26.73■■□□□ 1.87
CHTOP-205ENST00000403433 PBRM1Q86U86 1689 aa26.72■■□□□ 1.87
CHTOP-205ENST00000403433 P3H3Q8IVL6 736 aa26.72■■□□□ 1.87
CHTOP-205ENST00000403433 AQRO60306 1485 aaKnown RBP eCLIP26.7■■□□□ 1.865e-9■■■■■ 42.9
CHTOP-205ENST00000403433 CASKIN1Q8WXD9 1431 aa26.66■■□□□ 1.86
CHTOP-205ENST00000403433 SAMD9Q5K651 1589 aa26.66■■□□□ 1.86
CHTOP-205ENST00000403433 FMN1Q68DA7 1419 aa26.64■■□□□ 1.85
CHTOP-205ENST00000403433 WDR62O43379 1518 aa26.58■■□□□ 1.85
CHTOP-205ENST00000403433 ATP1B4Q9UN42 357 aaPredicted RBP26.58■■□□□ 1.85
CHTOP-205ENST00000403433 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
CHTOP-205ENST00000403433 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
CHTOP-205ENST00000403433 CLSPNQ9HAW4 1339 aa26.55■■□□□ 1.84
CHTOP-205ENST00000403433 DHX57Q6P158 1386 aaKnown RBP26.54■■□□□ 1.84
CHTOP-205ENST00000403433 IFT140Q96RY7 1462 aa26.54■■□□□ 1.84
CHTOP-205ENST00000403433 PHLDB1Q86UU1 1377 aa26.53■■□□□ 1.84
CHTOP-205ENST00000403433 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
CHTOP-205ENST00000403433 THOC2Q8NI27 1593 aaKnown RBP26.48■■□□□ 1.83
CHTOP-205ENST00000403433 ITGAEP38570 1179 aa26.47■■□□□ 1.83
CHTOP-205ENST00000403433 IQGAP2Q13576 1575 aa26.46■■□□□ 1.83
CHTOP-205ENST00000403433 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.83
CHTOP-205ENST00000403433 ZNF316A6NFI3 1004 aaPredicted RBP26.45■■□□□ 1.82
CHTOP-205ENST00000403433 LRRIQ1Q96JM4 1722 aa26.44■■□□□ 1.82
CHTOP-205ENST00000403433 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
CHTOP-205ENST00000403433 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
CHTOP-205ENST00000403433 FAM50AQ14320 339 aaKnown RBP26.38■■□□□ 1.81
CHTOP-205ENST00000403433 MTUS2Q5JR59 1369 aa26.37■■□□□ 1.81
CHTOP-205ENST00000403433 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
CHTOP-205ENST00000403433 RAB3GAP2Q9H2M9 1393 aa26.36■■□□□ 1.81
CHTOP-205ENST00000403433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.34■■□□□ 1.81
CHTOP-205ENST00000403433 SETD5Q9C0A6 1442 aa26.34■■□□□ 1.81
CHTOP-205ENST00000403433 EHBP1L1Q8N3D4 1523 aa26.33■■□□□ 1.8
CHTOP-205ENST00000403433 HECW1Q76N89 1606 aa26.32■■□□□ 1.8
CHTOP-205ENST00000403433 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
CHTOP-205ENST00000403433 SUPT6HQ7KZ85 1726 aaKnown RBP26.31■■□□□ 1.8
CHTOP-205ENST00000403433 FGD6Q6ZV73 1430 aa26.29■■□□□ 1.8
CHTOP-205ENST00000403433 UGGT2Q9NYU1 1516 aa26.29■■□□□ 1.8
CHTOP-205ENST00000403433 NCOA2Q15596 1464 aa26.24■■□□□ 1.79
CHTOP-205ENST00000403433 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
CHTOP-205ENST00000403433 KIAA0586Q9BVV6 1533 aa26.23■■□□□ 1.79
CHTOP-205ENST00000403433 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.79
CHTOP-205ENST00000403433 MYOM3Q5VTT5 1437 aa26.2■■□□□ 1.78
CHTOP-205ENST00000403433 MAPKBP1O60336 1514 aa26.2■■□□□ 1.78
CHTOP-205ENST00000403433 KIAA0556O60303 1618 aa26.18■■□□□ 1.78
CHTOP-205ENST00000403433 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
CHTOP-205ENST00000403433 EPRSP07814 1512 aaKnown RBP26.17■■□□□ 1.78
CHTOP-205ENST00000403433 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
CHTOP-205ENST00000403433 PTPN23Q9H3S7 1636 aa26.12■■□□□ 1.77
CHTOP-205ENST00000403433 DISP1Q96F81 1524 aa26.12■■□□□ 1.77
CHTOP-205ENST00000403433 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
CHTOP-205ENST00000403433 CDK13Q14004 1512 aaKnown RBP26.1■■□□□ 1.77
CHTOP-205ENST00000403433 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
CHTOP-205ENST00000403433 HFM1A2PYH4 1435 aa26.04■■□□□ 1.76
CHTOP-205ENST00000403433 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
CHTOP-205ENST00000403433 RAPGEF6Q8TEU7 1601 aa26.04■■□□□ 1.76
CHTOP-205ENST00000403433 TCOF1Q13428 1488 aaKnown RBP26.02■■□□□ 1.76
CHTOP-205ENST00000403433 PTPRKQ15262 1439 aa26.02■■□□□ 1.76
CHTOP-205ENST00000403433 NUP153P49790 1475 aaKnown RBP25.96■■□□□ 1.75
CHTOP-205ENST00000403433 MIA2Q96PC5 1412 aa25.96■■□□□ 1.75
CHTOP-205ENST00000403433 NUP160Q12769 1436 aa25.95■■□□□ 1.74
CHTOP-205ENST00000403433 ARID3CA6NKF2 412 aa25.94■■□□□ 1.74
CHTOP-205ENST00000403433 NAIPQ13075 1403 aa25.93■■□□□ 1.74
CHTOP-205ENST00000403433 FBLN2P98095 1184 aa25.93■■□□□ 1.74
CHTOP-205ENST00000403433 CENPBP07199 599 aaPredicted RBP25.92■■□□□ 1.74
CHTOP-205ENST00000403433 UACAQ9BZF9 1416 aa25.92■■□□□ 1.74
CHTOP-205ENST00000403433 GCC2Q8IWJ2 1684 aa25.91■■□□□ 1.74
CHTOP-205ENST00000403433 CARMIL2Q6F5E8 1435 aa25.9■■□□□ 1.74
CHTOP-205ENST00000403433 MIER1Q8N108 512 aa25.9■■□□□ 1.74
CHTOP-205ENST00000403433 ACIN1Q9UKV3 1341 aaKnown RBP25.88■■□□□ 1.73
CHTOP-205ENST00000403433 SIN3AQ96ST3 1273 aa25.87■■□□□ 1.73
CHTOP-205ENST00000403433 TIMELESSQ9UNS1 1208 aa25.87■■□□□ 1.73
CHTOP-205ENST00000403433 NEUROD1Q13562 356 aa25.86■■□□□ 1.73
CHTOP-205ENST00000403433 AKNAQ7Z591 1439 aa25.86■■□□□ 1.73
CHTOP-205ENST00000403433 CDK11AQ9UQ88 783 aaPredicted RBP25.84■■□□□ 1.73
CHTOP-205ENST00000403433 SCAF1Q9H7N4 1312 aaKnown RBP25.83■■□□□ 1.72
CHTOP-205ENST00000403433 PLB1Q6P1J6 1458 aa25.81■■□□□ 1.72
CHTOP-205ENST00000403433 JPH4Q96JJ6 628 aa25.8■■□□□ 1.72
CHTOP-205ENST00000403433 TROQ12816 1431 aaPredicted RBP25.78■■□□□ 1.72
CHTOP-205ENST00000403433 ITSN2Q9NZM3 1697 aa25.77■■□□□ 1.72
CHTOP-205ENST00000403433 ADCY10Q96PN6 1610 aa25.77■■□□□ 1.72
CHTOP-205ENST00000403433 DNMT1P26358 1616 aaKnown RBP25.76■■□□□ 1.71
CHTOP-205ENST00000403433 RRP7BPQ9NSQ0 103 aa25.76■■□□□ 1.71
CHTOP-205ENST00000403433 CHIC2Q9UKJ5 165 aa25.75■■□□□ 1.71
CHTOP-205ENST00000403433 DAPK1P53355 1430 aa25.73■■□□□ 1.71
CHTOP-205ENST00000403433 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
CHTOP-205ENST00000403433 ABCA8O94911 1581 aa25.72■■□□□ 1.71
CHTOP-205ENST00000403433 TONSLQ96HA7 1378 aa25.71■■□□□ 1.71
CHTOP-205ENST00000403433 KDM6BO15054 1643 aa25.69■■□□□ 1.7
CHTOP-205ENST00000403433 YTHDC1Q96MU7 727 aaKnown RBP25.69■■□□□ 1.7
CHTOP-205ENST00000403433 ROCK1Q13464 1354 aa25.68■■□□□ 1.7
CHTOP-205ENST00000403433 KIF14Q15058 1648 aa25.68■■□□□ 1.7
CHTOP-205ENST00000403433 CHD1O14646 1710 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms