RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 NISCHQ9Y2I1 1504 aa38.6■■■■□ 3.77
CHTOP-205ENST00000403433 CCDC180Q9P1Z9 1646 aa33.3■■■□□ 2.92
CHTOP-205ENST00000403433 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
CHTOP-205ENST00000403433 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
CHTOP-205ENST00000403433 DCAF1Q9Y4B6 1507 aa31.85■■■□□ 2.69
CHTOP-205ENST00000403433 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
CHTOP-205ENST00000403433 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
CHTOP-205ENST00000403433 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
CHTOP-205ENST00000403433 ABCC9O60706 1549 aa30.9■■■□□ 2.54
CHTOP-205ENST00000403433 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
CHTOP-205ENST00000403433 NACADO15069 1562 aa30.81■■■□□ 2.52
CHTOP-205ENST00000403433 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
CHTOP-205ENST00000403433 CHIC1Q5VXU3 224 aa30.31■■■□□ 2.44
CHTOP-205ENST00000403433 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
CHTOP-205ENST00000403433 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
CHTOP-205ENST00000403433 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
CHTOP-205ENST00000403433 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
CHTOP-205ENST00000403433 BAZ1AQ9NRL2 1556 aaPredicted RBP29.76■■■□□ 2.35
CHTOP-205ENST00000403433 WIZO95785 1651 aa29.74■■■□□ 2.35
CHTOP-205ENST00000403433 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
CHTOP-205ENST00000403433 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
CHTOP-205ENST00000403433 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
CHTOP-205ENST00000403433 TRIM41Q8WV44 630 aa29.35■■■□□ 2.29
CHTOP-205ENST00000403433 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
CHTOP-205ENST00000403433 LOC105371045A0A1W2PR82 267 aa29.24■■■□□ 2.27
CHTOP-205ENST00000403433 EIF4G1Q04637 1599 aaKnown RBP29.23■■■□□ 2.27
CHTOP-205ENST00000403433 SMARCA2P51531 1590 aa29.15■■■□□ 2.26
CHTOP-205ENST00000403433 CCDC88BA6NC98 1476 aa29.11■■■□□ 2.25
CHTOP-205ENST00000403433 PEG3Q9GZU2 1588 aa29.08■■■□□ 2.25
CHTOP-205ENST00000403433 FAM9AQ8IZU1 332 aaPredicted RBP28.91■■■□□ 2.22
CHTOP-205ENST00000403433 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
CHTOP-205ENST00000403433 ABCC8Q09428 1581 aa28.82■■■□□ 2.2
CHTOP-205ENST00000403433 BAZ1BQ9UIG0 1483 aaKnown RBP28.76■■■□□ 2.2
CHTOP-205ENST00000403433 PCGF6Q9BYE7 350 aa28.75■■■□□ 2.19
CHTOP-205ENST00000403433 EHMT2Q96KQ7 1210 aa28.55■■■□□ 2.16
CHTOP-205ENST00000403433 HRCP23327 699 aa28.51■■■□□ 2.16
CHTOP-205ENST00000403433 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
CHTOP-205ENST00000403433 WRNQ14191 1432 aaPredicted RBP eCLIP28.48■■■□□ 2.155e-6■■□□□ 12.5
CHTOP-205ENST00000403433 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
CHTOP-205ENST00000403433 EEA1Q15075 1411 aa28.43■■■□□ 2.14
CHTOP-205ENST00000403433 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
CHTOP-205ENST00000403433 SOGA1O94964 1423 aa28.4■■■□□ 2.14
CHTOP-205ENST00000403433 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
CHTOP-205ENST00000403433 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
CHTOP-205ENST00000403433 CSRNP3Q8WYN3 585 aa28.22■■■□□ 2.11
CHTOP-205ENST00000403433 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
CHTOP-205ENST00000403433 TNIKQ9UKE5 1360 aa28.15■■■□□ 2.1
CHTOP-205ENST00000403433 GOLGA3Q08378 1498 aa28.13■■■□□ 2.09
CHTOP-205ENST00000403433 CEP162Q5TB80 1403 aa28.12■■■□□ 2.09
CHTOP-205ENST00000403433 BIVM-ERCC5R4GMW8 1640 aa28.11■■■□□ 2.09
CHTOP-205ENST00000403433 KIF21BO75037 1637 aa28.07■■■□□ 2.08
CHTOP-205ENST00000403433 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
CHTOP-205ENST00000403433 CFTRP13569 1480 aa28.03■■■□□ 2.08
CHTOP-205ENST00000403433 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
CHTOP-205ENST00000403433 UBTFP17480 764 aaKnown RBP28■■■□□ 2.07
CHTOP-205ENST00000403433 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.07
CHTOP-205ENST00000403433 CUX1P39880 1505 aa27.91■■■□□ 2.06
CHTOP-205ENST00000403433 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
CHTOP-205ENST00000403433 RAPGEF2Q9Y4G8 1499 aa27.79■■■□□ 2.04
CHTOP-205ENST00000403433 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
CHTOP-205ENST00000403433 ZEB1P37275 1124 aaPredicted RBP27.74■■■□□ 2.03
CHTOP-205ENST00000403433 CLIP1P30622 1438 aa27.72■■■□□ 2.03
CHTOP-205ENST00000403433 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
CHTOP-205ENST00000403433 KIF27Q86VH2 1401 aa27.68■■■□□ 2.02
CHTOP-205ENST00000403433 PRXQ9BXM0 1461 aa27.66■■■□□ 2.02
CHTOP-205ENST00000403433 VPS8Q8N3P4 1428 aa27.57■■■□□ 2
CHTOP-205ENST00000403433 TTBK1Q5TCY1 1321 aaPredicted RBP27.55■■■□□ 2
CHTOP-205ENST00000403433 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
CHTOP-205ENST00000403433 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
CHTOP-205ENST00000403433 CUX2O14529 1486 aa27.47■■□□□ 1.99
CHTOP-205ENST00000403433 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
CHTOP-205ENST00000403433 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
CHTOP-205ENST00000403433 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
CHTOP-205ENST00000403433 NESP48681 1621 aa27.36■■□□□ 1.97
CHTOP-205ENST00000403433 APLP2Q06481 763 aa27.36■■□□□ 1.97
CHTOP-205ENST00000403433 ARAP1Q96P48 1450 aa27.34■■□□□ 1.97
CHTOP-205ENST00000403433 IGF1RP08069 1367 aa27.32■■□□□ 1.96
CHTOP-205ENST00000403433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
CHTOP-205ENST00000403433 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
CHTOP-205ENST00000403433 CCER1Q8TC90 406 aaPredicted RBP27.29■■□□□ 1.96
CHTOP-205ENST00000403433 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
CHTOP-205ENST00000403433 CARMIL1Q5VZK9 1371 aa27.23■■□□□ 1.95
CHTOP-205ENST00000403433 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
CHTOP-205ENST00000403433 ARHGAP35Q9NRY4 1499 aa27.18■■□□□ 1.94
CHTOP-205ENST00000403433 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
CHTOP-205ENST00000403433 PDS5BQ9NTI5 1447 aa27.13■■□□□ 1.93
CHTOP-205ENST00000403433 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
CHTOP-205ENST00000403433 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
CHTOP-205ENST00000403433 CUL7Q14999 1698 aa27.1■■□□□ 1.93
CHTOP-205ENST00000403433 KIF21AQ7Z4S6 1674 aa27.06■■□□□ 1.92
CHTOP-205ENST00000403433 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
CHTOP-205ENST00000403433 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
CHTOP-205ENST00000403433 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
CHTOP-205ENST00000403433 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.91
CHTOP-205ENST00000403433 KANK4Q5T7N3 995 aaPredicted RBP26.95■■□□□ 1.9
CHTOP-205ENST00000403433 MAP3K1Q13233 1512 aa26.9■■□□□ 1.9
CHTOP-205ENST00000403433 EFCAB5A4FU69 1503 aa26.88■■□□□ 1.89
CHTOP-205ENST00000403433 TIAM1Q13009 1591 aa26.88■■□□□ 1.89
CHTOP-205ENST00000403433 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
CHTOP-205ENST00000403433 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms