RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PBRM1Q86U86 1689 aa29.81■■■□□ 2.36
CCDC47-202ENST00000403162 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
CCDC47-202ENST00000403162 RAPGEF2Q9Y4G8 1499 aa29.8■■■□□ 2.36
CCDC47-202ENST00000403162 CENPBP07199 599 aaPredicted RBP29.79■■■□□ 2.36
CCDC47-202ENST00000403162 CUL7Q14999 1698 aa29.76■■■□□ 2.35
CCDC47-202ENST00000403162 CLIP1P30622 1438 aa29.73■■■□□ 2.35
CCDC47-202ENST00000403162 ZNF316A6NFI3 1004 aaPredicted RBP29.71■■■□□ 2.35
CCDC47-202ENST00000403162 VPS8Q8N3P4 1428 aa29.7■■■□□ 2.34
CCDC47-202ENST00000403162 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
CCDC47-202ENST00000403162 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
CCDC47-202ENST00000403162 ADAMTS12P58397 1594 aa29.63■■■□□ 2.33
CCDC47-202ENST00000403162 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
CCDC47-202ENST00000403162 GTF3C3Q9Y5Q9 886 aa29.57■■■□□ 2.32
CCDC47-202ENST00000403162 HNRNPUL2Q1KMD3 747 aaKnown RBP29.49■■■□□ 2.31
CCDC47-202ENST00000403162 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
CCDC47-202ENST00000403162 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
CCDC47-202ENST00000403162 FBLN2P98095 1184 aa29.48■■■□□ 2.31
CCDC47-202ENST00000403162 APLP2Q06481 763 aa29.44■■■□□ 2.3
CCDC47-202ENST00000403162 GRIN2AQ12879 1464 aa29.44■■■□□ 2.3
CCDC47-202ENST00000403162 RANGAP1P46060 587 aaPredicted RBP29.43■■■□□ 2.3
CCDC47-202ENST00000403162 CTTNBP2Q8WZ74 1663 aa29.35■■■□□ 2.29
CCDC47-202ENST00000403162 CHD1O14646 1710 aa29.29■■■□□ 2.28
CCDC47-202ENST00000403162 CLSPNQ9HAW4 1339 aa29.26■■■□□ 2.28
CCDC47-202ENST00000403162 ARAP1Q96P48 1450 aa29.26■■■□□ 2.27
CCDC47-202ENST00000403162 MIER1Q8N108 512 aa29.25■■■□□ 2.27
CCDC47-202ENST00000403162 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
CCDC47-202ENST00000403162 NUP160Q12769 1436 aa29.23■■■□□ 2.27
CCDC47-202ENST00000403162 KIAA0586Q9BVV6 1533 aa29.21■■■□□ 2.27
CCDC47-202ENST00000403162 IQGAP2Q13576 1575 aa29.21■■■□□ 2.27
CCDC47-202ENST00000403162 YTHDC1Q96MU7 727 aaKnown RBP29.15■■■□□ 2.26
CCDC47-202ENST00000403162 ARHGAP35Q9NRY4 1499 aa29.15■■■□□ 2.26
CCDC47-202ENST00000403162 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
CCDC47-202ENST00000403162 P3H3Q8IVL6 736 aa29.1■■■□□ 2.25
CCDC47-202ENST00000403162 RRBP1Q9P2E9 1410 aaKnown RBP29.09■■■□□ 2.25
CCDC47-202ENST00000403162 EFCAB5A4FU69 1503 aa29.08■■■□□ 2.25
CCDC47-202ENST00000403162 UGGT2Q9NYU1 1516 aa29.05■■■□□ 2.24
CCDC47-202ENST00000403162 JPH4Q96JJ6 628 aa29.03■■■□□ 2.24
CCDC47-202ENST00000403162 SAMD9Q5K651 1589 aa29.02■■■□□ 2.24
CCDC47-202ENST00000403162 KANK4Q5T7N3 995 aaPredicted RBP29.02■■■□□ 2.24
CCDC47-202ENST00000403162 FHOD3Q2V2M9 1422 aa29■■■□□ 2.23
CCDC47-202ENST00000403162 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.22
CCDC47-202ENST00000403162 DISP1Q96F81 1524 aa28.94■■■□□ 2.22
CCDC47-202ENST00000403162 OSCARQ8IYS5 282 aa28.94■■■□□ 2.22
CCDC47-202ENST00000403162 KIAA0556O60303 1618 aa28.91■■■□□ 2.22
CCDC47-202ENST00000403162 CARMIL2Q6F5E8 1435 aa28.89■■■□□ 2.22
CCDC47-202ENST00000403162 PRG4Q92954 1404 aaPredicted RBP28.88■■■□□ 2.21
CCDC47-202ENST00000403162 CCNB3Q8WWL7 1395 aa28.87■■■□□ 2.21
CCDC47-202ENST00000403162 SHROOM2Q13796 1616 aa28.86■■■□□ 2.21
CCDC47-202ENST00000403162 MYT1Q01538 1121 aa28.84■■■□□ 2.21
CCDC47-202ENST00000403162 FMN1Q68DA7 1419 aa28.83■■■□□ 2.21
CCDC47-202ENST00000403162 MAP3K1Q13233 1512 aa28.8■■■□□ 2.2
CCDC47-202ENST00000403162 ATP1B4Q9UN42 357 aaPredicted RBP28.75■■■□□ 2.19
CCDC47-202ENST00000403162 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
CCDC47-202ENST00000403162 TIAM1Q13009 1591 aa28.73■■■□□ 2.19
CCDC47-202ENST00000403162 ERCC6L2Q5T890 1561 aa28.73■■■□□ 2.19
CCDC47-202ENST00000403162 CASKIN1Q8WXD9 1431 aa28.72■■■□□ 2.19
CCDC47-202ENST00000403162 FYCO1Q9BQS8 1478 aa28.7■■■□□ 2.18
CCDC47-202ENST00000403162 PTPRGP23470 1445 aa28.65■■■□□ 2.18
CCDC47-202ENST00000403162 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
CCDC47-202ENST00000403162 RAB3GAP2Q9H2M9 1393 aa28.63■■■□□ 2.17
CCDC47-202ENST00000403162 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
CCDC47-202ENST00000403162 LRRC9Q6ZRR7 1453 aa28.59■■■□□ 2.17
CCDC47-202ENST00000403162 RAPGEF6Q8TEU7 1601 aa28.58■■■□□ 2.17
CCDC47-202ENST00000403162 HECW1Q76N89 1606 aa28.57■■■□□ 2.16
CCDC47-202ENST00000403162 CFAP43Q8NDM7 1665 aa28.56■■■□□ 2.16
CCDC47-202ENST00000403162 SETD5Q9C0A6 1442 aa28.54■■■□□ 2.16
CCDC47-202ENST00000403162 ARID3CA6NKF2 412 aa28.54■■■□□ 2.16
CCDC47-202ENST00000403162 ITGAEP38570 1179 aa28.53■■■□□ 2.16
CCDC47-202ENST00000403162 ABCA8O94911 1581 aa28.52■■■□□ 2.16
CCDC47-202ENST00000403162 LRRIQ1Q96JM4 1722 aa28.51■■■□□ 2.15
CCDC47-202ENST00000403162 NUP153P49790 1475 aaKnown RBP28.5■■■□□ 2.15
CCDC47-202ENST00000403162 EPRSP07814 1512 aaKnown RBP28.48■■■□□ 2.15
CCDC47-202ENST00000403162 SUPT16HQ9Y5B9 1047 aaKnown RBP28.48■■■□□ 2.15
CCDC47-202ENST00000403162 PHLDB1Q86UU1 1377 aa28.48■■■□□ 2.15
CCDC47-202ENST00000403162 CCDC18Q5T9S5 1454 aa28.48■■■□□ 2.15
CCDC47-202ENST00000403162 UACAQ9BZF9 1416 aa28.47■■■□□ 2.15
CCDC47-202ENST00000403162 CDK13Q14004 1512 aaKnown RBP28.45■■■□□ 2.14
CCDC47-202ENST00000403162 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
CCDC47-202ENST00000403162 ABCC2Q92887 1545 aa28.38■■■□□ 2.13
CCDC47-202ENST00000403162 MTUS2Q5JR59 1369 aa28.37■■■□□ 2.13
CCDC47-202ENST00000403162 TIMELESSQ9UNS1 1208 aa28.34■■■□□ 2.13
CCDC47-202ENST00000403162 ATP10BO94823 1461 aa28.34■■■□□ 2.13
CCDC47-202ENST00000403162 UHRF1BP1LA0JNW5 1464 aa28.33■■■□□ 2.13
CCDC47-202ENST00000403162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.33■■■□□ 2.13
CCDC47-202ENST00000403162 RIMBP3CA6NJZ7 1639 aa28.32■■■□□ 2.12
CCDC47-202ENST00000403162 RIMBP3BA6NNM3 1639 aa28.32■■■□□ 2.12
CCDC47-202ENST00000403162 RIMBP3Q9UFD9 1639 aa28.32■■■□□ 2.12
CCDC47-202ENST00000403162 MAGI3Q5TCQ9 1506 aa28.3■■■□□ 2.12
CCDC47-202ENST00000403162 CDK11AQ9UQ88 783 aaPredicted RBP28.3■■■□□ 2.12
CCDC47-202ENST00000403162 FAM50AQ14320 339 aaKnown RBP28.29■■■□□ 2.12
CCDC47-202ENST00000403162 EHBP1L1Q8N3D4 1523 aa28.27■■■□□ 2.12
CCDC47-202ENST00000403162 ADCY10Q96PN6 1610 aa28.27■■■□□ 2.12
CCDC47-202ENST00000403162 SIN3AQ96ST3 1273 aa28.23■■■□□ 2.11
CCDC47-202ENST00000403162 PLEKHD1A6NEE1 506 aa28.22■■■□□ 2.11
CCDC47-202ENST00000403162 CYB5RLQ6IPT4 315 aa28.22■■■□□ 2.11
CCDC47-202ENST00000403162 KDM5BQ9UGL1 1544 aa28.21■■■□□ 2.11
CCDC47-202ENST00000403162 KCNH8Q96L42 1107 aa28.2■■■□□ 2.11
CCDC47-202ENST00000403162 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
CCDC47-202ENST00000403162 TROQ12816 1431 aaPredicted RBP28.19■■■□□ 2.1
CCDC47-202ENST00000403162 SUPT6HQ7KZ85 1726 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms