RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 CHD1O14646 1710 aa31.09■■■□□ 2.57
PARVB-202ENST00000402876 CLIP1P30622 1438 aa31.05■■■□□ 2.56
PARVB-202ENST00000402876 FBLN2P98095 1184 aa31.01■■■□□ 2.55
PARVB-202ENST00000402876 IQGAP2Q13576 1575 aa30.99■■■□□ 2.55
PARVB-202ENST00000402876 CEP170Q5SW79 1584 aa30.98■■■□□ 2.55
PARVB-202ENST00000402876 NUP160Q12769 1436 aa30.95■■■□□ 2.54
PARVB-202ENST00000402876 KIAA0586Q9BVV6 1533 aa30.94■■■□□ 2.54
PARVB-202ENST00000402876 RANGAP1P46060 587 aaPredicted RBP30.91■■■□□ 2.54
PARVB-202ENST00000402876 EFCAB5A4FU69 1503 aa30.91■■■□□ 2.54
PARVB-202ENST00000402876 ARHGAP35Q9NRY4 1499 aa30.86■■■□□ 2.53
PARVB-202ENST00000402876 SAMD9Q5K651 1589 aa30.83■■■□□ 2.53
PARVB-202ENST00000402876 UGGT2Q9NYU1 1516 aa30.82■■■□□ 2.52
PARVB-202ENST00000402876 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
PARVB-202ENST00000402876 VPS8Q8N3P4 1428 aa30.73■■■□□ 2.51
PARVB-202ENST00000402876 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
PARVB-202ENST00000402876 KIAA0556O60303 1618 aa30.67■■■□□ 2.5
PARVB-202ENST00000402876 SHROOM2Q13796 1616 aa30.65■■■□□ 2.5
PARVB-202ENST00000402876 FHOD3Q2V2M9 1422 aa30.65■■■□□ 2.5
PARVB-202ENST00000402876 DISP1Q96F81 1524 aa30.63■■■□□ 2.49
PARVB-202ENST00000402876 JPH4Q96JJ6 628 aa30.62■■■□□ 2.49
PARVB-202ENST00000402876 P3H3Q8IVL6 736 aa30.61■■■□□ 2.49
PARVB-202ENST00000402876 CARMIL2Q6F5E8 1435 aa30.6■■■□□ 2.49
PARVB-202ENST00000402876 FMN1Q68DA7 1419 aa30.57■■■□□ 2.48
PARVB-202ENST00000402876 PCF11O94913 1555 aaKnown RBP30.5■■■□□ 2.47
PARVB-202ENST00000402876 PRG4Q92954 1404 aaPredicted RBP30.5■■■□□ 2.47
PARVB-202ENST00000402876 OSCARQ8IYS5 282 aa30.49■■■□□ 2.47
PARVB-202ENST00000402876 FYCO1Q9BQS8 1478 aa30.46■■■□□ 2.47
PARVB-202ENST00000402876 CASKIN1Q8WXD9 1431 aa30.44■■■□□ 2.46
PARVB-202ENST00000402876 APLP2Q06481 763 aa30.4■■■□□ 2.46
PARVB-202ENST00000402876 HECW1Q76N89 1606 aa30.36■■■□□ 2.45
PARVB-202ENST00000402876 CFAP43Q8NDM7 1665 aa30.34■■■□□ 2.45
PARVB-202ENST00000402876 RAPGEF6Q8TEU7 1601 aa30.34■■■□□ 2.45
PARVB-202ENST00000402876 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
PARVB-202ENST00000402876 MAP3K1Q13233 1512 aa30.32■■■□□ 2.44
PARVB-202ENST00000402876 TIAM1Q13009 1591 aa30.3■■■□□ 2.44
PARVB-202ENST00000402876 LRRIQ1Q96JM4 1722 aa30.29■■■□□ 2.44
PARVB-202ENST00000402876 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
PARVB-202ENST00000402876 PTPRGP23470 1445 aa30.27■■■□□ 2.44
PARVB-202ENST00000402876 TTBK1Q5TCY1 1321 aaPredicted RBP30.26■■■□□ 2.44
PARVB-202ENST00000402876 CCDC18Q5T9S5 1454 aa30.25■■■□□ 2.43
PARVB-202ENST00000402876 ABCA8O94911 1581 aa30.24■■■□□ 2.43
PARVB-202ENST00000402876 PLB1Q6P1J6 1458 aa30.2■■■□□ 2.43
PARVB-202ENST00000402876 PPARGC1BQ86YN6 1023 aaKnown RBP30.17■■■□□ 2.42
PARVB-202ENST00000402876 EPRSP07814 1512 aaKnown RBP30.17■■■□□ 2.42
PARVB-202ENST00000402876 NUP153P49790 1475 aaKnown RBP30.16■■■□□ 2.42
PARVB-202ENST00000402876 LRRC9Q6ZRR7 1453 aa30.12■■■□□ 2.41
PARVB-202ENST00000402876 UACAQ9BZF9 1416 aa30.11■■■□□ 2.41
PARVB-202ENST00000402876 CDK13Q14004 1512 aaKnown RBP30.1■■■□□ 2.41
PARVB-202ENST00000402876 ABCC2Q92887 1545 aa30.08■■■□□ 2.41
PARVB-202ENST00000402876 KANK4Q5T7N3 995 aaPredicted RBP30.06■■■□□ 2.4
PARVB-202ENST00000402876 ARHGEF11O15085 1522 aa30.05■■■□□ 2.4
PARVB-202ENST00000402876 EHBP1L1Q8N3D4 1523 aa30.04■■■□□ 2.4
PARVB-202ENST00000402876 UHRF1BP1LA0JNW5 1464 aa30.04■■■□□ 2.4
PARVB-202ENST00000402876 MTUS2Q5JR59 1369 aa30.01■■■□□ 2.39
PARVB-202ENST00000402876 RIMBP3CA6NJZ7 1639 aa29.97■■■□□ 2.39
PARVB-202ENST00000402876 RIMBP3BA6NNM3 1639 aa29.97■■■□□ 2.39
PARVB-202ENST00000402876 RIMBP3Q9UFD9 1639 aa29.97■■■□□ 2.39
PARVB-202ENST00000402876 SUPT6HQ7KZ85 1726 aaKnown RBP29.96■■■□□ 2.39
PARVB-202ENST00000402876 ATP10BO94823 1461 aa29.96■■■□□ 2.39
PARVB-202ENST00000402876 ARID3CA6NKF2 412 aa29.96■■■□□ 2.39
PARVB-202ENST00000402876 TRIM26Q12899 539 aaPredicted RBP29.96■■■□□ 2.39
PARVB-202ENST00000402876 MAGI3Q5TCQ9 1506 aa29.96■■■□□ 2.39
PARVB-202ENST00000402876 CDK11AQ9UQ88 783 aaPredicted RBP29.95■■■□□ 2.39
PARVB-202ENST00000402876 ADCY10Q96PN6 1610 aa29.94■■■□□ 2.38
PARVB-202ENST00000402876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.93■■■□□ 2.38
PARVB-202ENST00000402876 HNRNPUL2Q1KMD3 747 aaKnown RBP29.93■■■□□ 2.38
PARVB-202ENST00000402876 ZCCHC11Q5TAX3 1644 aaKnown RBP29.9■■■□□ 2.38
PARVB-202ENST00000402876 KDM5BQ9UGL1 1544 aa29.88■■■□□ 2.37
PARVB-202ENST00000402876 TROQ12816 1431 aaPredicted RBP29.86■■■□□ 2.37
PARVB-202ENST00000402876 NCOA2Q15596 1464 aa29.82■■■□□ 2.36
PARVB-202ENST00000402876 PLEKHD1A6NEE1 506 aa29.8■■■□□ 2.36
PARVB-202ENST00000402876 KIF14Q15058 1648 aa29.78■■■□□ 2.36
PARVB-202ENST00000402876 PHLDB1Q86UU1 1377 aa29.75■■■□□ 2.35
PARVB-202ENST00000402876 PCGF6Q9BYE7 350 aa29.73■■■□□ 2.35
PARVB-202ENST00000402876 RRBP1Q9P2E9 1410 aaKnown RBP29.72■■■□□ 2.35
PARVB-202ENST00000402876 MYOM3Q5VTT5 1437 aa29.69■■■□□ 2.34
PARVB-202ENST00000402876 ITSN2Q9NZM3 1697 aa29.69■■■□□ 2.34
PARVB-202ENST00000402876 NPM1P06748 294 aaKnown RBP eCLIP29.68■■■□□ 2.34
PARVB-202ENST00000402876 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
PARVB-202ENST00000402876 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.34
PARVB-202ENST00000402876 FGD6Q6ZV73 1430 aa29.63■■■□□ 2.33
PARVB-202ENST00000402876 WDR7Q9Y4E6 1490 aa29.62■■■□□ 2.33
PARVB-202ENST00000402876 ABCC10Q5T3U5 1492 aa29.61■■■□□ 2.33
PARVB-202ENST00000402876 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
PARVB-202ENST00000402876 PTPN23Q9H3S7 1636 aa29.57■■■□□ 2.32
PARVB-202ENST00000402876 ASXL2Q76L83 1435 aa29.57■■■□□ 2.32
PARVB-202ENST00000402876 MIA2Q96PC5 1412 aa29.57■■■□□ 2.32
PARVB-202ENST00000402876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.55■■■□□ 2.321e-6■■■■■ 30.2
PARVB-202ENST00000402876 MYO5CQ9NQX4 1742 aa29.54■■■□□ 2.32
PARVB-202ENST00000402876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.54■■■□□ 2.32
PARVB-202ENST00000402876 TTC37Q6PGP7 1564 aa29.54■■■□□ 2.32
PARVB-202ENST00000402876 MAPKBP1O60336 1514 aa29.52■■■□□ 2.32
PARVB-202ENST00000402876 GPATCH8Q9UKJ3 1502 aaKnown RBP29.52■■■□□ 2.32
PARVB-202ENST00000402876 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
PARVB-202ENST00000402876 TCOF1Q13428 1488 aaKnown RBP29.5■■■□□ 2.31
PARVB-202ENST00000402876 KCNH8Q96L42 1107 aa29.49■■■□□ 2.31
PARVB-202ENST00000402876 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
PARVB-202ENST00000402876 ABCA9Q8IUA7 1624 aa29.47■■■□□ 2.31
PARVB-202ENST00000402876 CDC42BPBQ9Y5S2 1711 aa29.47■■■□□ 2.31
PARVB-202ENST00000402876 CFDP1Q9UEE9 299 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms