RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 NISCHQ9Y2I1 1504 aa45.07■■■■■ 4.81
PARVB-202ENST00000402876 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
PARVB-202ENST00000402876 ZCCHC6Q5VYS8 1495 aaKnown RBP37.78■■■■□ 3.64
PARVB-202ENST00000402876 ABCC9O60706 1549 aa37.67■■■■□ 3.62
PARVB-202ENST00000402876 DCAF1Q9Y4B6 1507 aa37.36■■■■□ 3.57
PARVB-202ENST00000402876 DCAF8L2P0C7V8 631 aa37.17■■■■□ 3.54
PARVB-202ENST00000402876 MYO15BQ96JP2 1530 aa37.09■■■■□ 3.53
PARVB-202ENST00000402876 NACADO15069 1562 aa36.99■■■■□ 3.51
PARVB-202ENST00000402876 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
PARVB-202ENST00000402876 SHROOM4Q9ULL8 1493 aa36.28■■■■□ 3.4
PARVB-202ENST00000402876 SCRIBQ14160 1630 aa36.26■■■■□ 3.4
PARVB-202ENST00000402876 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
PARVB-202ENST00000402876 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
PARVB-202ENST00000402876 PABPN1Q86U42 306 aaKnown RBP eCLIP35.33■■■■□ 3.25
PARVB-202ENST00000402876 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
PARVB-202ENST00000402876 BAZ1AQ9NRL2 1556 aaPredicted RBP34.89■■■■□ 3.18
PARVB-202ENST00000402876 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
PARVB-202ENST00000402876 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
PARVB-202ENST00000402876 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
PARVB-202ENST00000402876 SUPT5HO00267 1087 aaKnown RBP34.68■■■■□ 3.14
PARVB-202ENST00000402876 EIF4G1Q04637 1599 aaKnown RBP34.57■■■■□ 3.12
PARVB-202ENST00000402876 WIZO95785 1651 aa34.49■■■■□ 3.11
PARVB-202ENST00000402876 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
PARVB-202ENST00000402876 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
PARVB-202ENST00000402876 SMARCA2P51531 1590 aa34.32■■■■□ 3.09
PARVB-202ENST00000402876 ATAD2BQ9ULI0 1458 aa34.25■■■■□ 3.07
PARVB-202ENST00000402876 TOP2AP11388 1531 aaKnown RBP34.17■■■■□ 3.06
PARVB-202ENST00000402876 CC2D2AQ9P2K1 1620 aa34.17■■■■□ 3.06
PARVB-202ENST00000402876 BAZ1BQ9UIG0 1483 aaKnown RBP34.07■■■■□ 3.05
PARVB-202ENST00000402876 HMGXB3Q12766 1538 aa34.06■■■■□ 3.04
PARVB-202ENST00000402876 NCAPD3P42695 1498 aa34.05■■■■□ 3.04
PARVB-202ENST00000402876 CCDC88BA6NC98 1476 aa33.72■■■□□ 2.99
PARVB-202ENST00000402876 PRDM2Q13029 1718 aa33.2■■■□□ 2.91
PARVB-202ENST00000402876 CFTRP13569 1480 aa33.17■■■□□ 2.9
PARVB-202ENST00000402876 CADPSQ9ULU8 1353 aa33.11■■■□□ 2.89
PARVB-202ENST00000402876 LAMC3Q9Y6N6 1575 aa33.06■■■□□ 2.88
PARVB-202ENST00000402876 CHIC1Q5VXU3 224 aa33■■■□□ 2.87
PARVB-202ENST00000402876 NESP48681 1621 aa32.92■■■□□ 2.86
PARVB-202ENST00000402876 ABCC8Q09428 1581 aa32.87■■■□□ 2.85
PARVB-202ENST00000402876 FANCD2Q9BXW9 1451 aa32.78■■■□□ 2.84
PARVB-202ENST00000402876 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
PARVB-202ENST00000402876 WRNQ14191 1432 aaPredicted RBP eCLIP32.74■■■□□ 2.83
PARVB-202ENST00000402876 TRIM41Q8WV44 630 aa32.71■■■□□ 2.83
PARVB-202ENST00000402876 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
PARVB-202ENST00000402876 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
PARVB-202ENST00000402876 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
PARVB-202ENST00000402876 BIVM-ERCC5R4GMW8 1640 aa32.62■■■□□ 2.81
PARVB-202ENST00000402876 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
PARVB-202ENST00000402876 CUX1P39880 1505 aa32.56■■■□□ 2.8
PARVB-202ENST00000402876 DNMBPQ6XZF7 1577 aa32.48■■■□□ 2.79
PARVB-202ENST00000402876 ERCC6Q03468 1493 aa32.42■■■□□ 2.78
PARVB-202ENST00000402876 TOPBP1Q92547 1522 aa32.39■■■□□ 2.78
PARVB-202ENST00000402876 URB2Q14146 1524 aaKnown RBP32.38■■■□□ 2.77
PARVB-202ENST00000402876 MRC2Q9UBG0 1479 aa32.36■■■□□ 2.77
PARVB-202ENST00000402876 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
PARVB-202ENST00000402876 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
PARVB-202ENST00000402876 WDR62O43379 1518 aa32.23■■■□□ 2.75
PARVB-202ENST00000402876 POLA1P09884 1462 aaPredicted RBP32.17■■■□□ 2.74
PARVB-202ENST00000402876 EEA1Q15075 1411 aa32.12■■■□□ 2.73
PARVB-202ENST00000402876 SOGA1O94964 1423 aa32.1■■■□□ 2.73
PARVB-202ENST00000402876 WDR97A6NE52 1622 aa32.03■■■□□ 2.72
PARVB-202ENST00000402876 RAD54L2Q9Y4B4 1467 aa32.01■■■□□ 2.71
PARVB-202ENST00000402876 ABCA10Q8WWZ4 1543 aa32■■■□□ 2.71
PARVB-202ENST00000402876 FAM9AQ8IZU1 332 aaPredicted RBP32■■■□□ 2.71
PARVB-202ENST00000402876 RUSC2Q8N2Y8 1516 aa32■■■□□ 2.71
PARVB-202ENST00000402876 TARBP1Q13395 1621 aaKnown RBP31.97■■■□□ 2.71
PARVB-202ENST00000402876 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
PARVB-202ENST00000402876 CUX2O14529 1486 aa31.97■■■□□ 2.71
PARVB-202ENST00000402876 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
PARVB-202ENST00000402876 CSRNP3Q8WYN3 585 aa31.84■■■□□ 2.69
PARVB-202ENST00000402876 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.69
PARVB-202ENST00000402876 KIF21BO75037 1637 aa31.75■■■□□ 2.67
PARVB-202ENST00000402876 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
PARVB-202ENST00000402876 TDRD9Q8NDG6 1382 aaKnown RBP31.71■■■□□ 2.67
PARVB-202ENST00000402876 PBRM1Q86U86 1689 aa31.7■■■□□ 2.66
PARVB-202ENST00000402876 ERICH3Q5RHP9 1530 aa31.66■■■□□ 2.66
PARVB-202ENST00000402876 IGF1RP08069 1367 aa31.66■■■□□ 2.66
PARVB-202ENST00000402876 CUL7Q14999 1698 aa31.65■■■□□ 2.66
PARVB-202ENST00000402876 DNAJC5Q9H3Z4 198 aa31.65■■■□□ 2.66
PARVB-202ENST00000402876 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.66
PARVB-202ENST00000402876 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
PARVB-202ENST00000402876 LOC105371045A0A1W2PR82 267 aa31.63■■■□□ 2.65
PARVB-202ENST00000402876 PRXQ9BXM0 1461 aa31.62■■■□□ 2.65
PARVB-202ENST00000402876 GOLGA3Q08378 1498 aa31.61■■■□□ 2.65
PARVB-202ENST00000402876 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.65
PARVB-202ENST00000402876 GRIN2BQ13224 1484 aa31.56■■■□□ 2.64
PARVB-202ENST00000402876 CARMIL1Q5VZK9 1371 aa31.52■■■□□ 2.64
PARVB-202ENST00000402876 EHMT2Q96KQ7 1210 aa31.51■■■□□ 2.63
PARVB-202ENST00000402876 RAPGEF2Q9Y4G8 1499 aa31.5■■■□□ 2.63
PARVB-202ENST00000402876 ADAMTS12P58397 1594 aa31.44■■■□□ 2.62
PARVB-202ENST00000402876 UBTFP17480 764 aaKnown RBP31.39■■■□□ 2.62
PARVB-202ENST00000402876 TNIKQ9UKE5 1360 aa31.39■■■□□ 2.62
PARVB-202ENST00000402876 FHAD1B1AJZ9 1412 aa31.38■■■□□ 2.61
PARVB-202ENST00000402876 SNAPC4Q5SXM2 1469 aa31.37■■■□□ 2.61
PARVB-202ENST00000402876 MAGI1Q96QZ7 1491 aaPredicted RBP31.37■■■□□ 2.61
PARVB-202ENST00000402876 CTTNBP2Q8WZ74 1663 aa31.26■■■□□ 2.6
PARVB-202ENST00000402876 SYNJ2O15056 1496 aa31.22■■■□□ 2.59
PARVB-202ENST00000402876 CEP162Q5TB80 1403 aa31.17■■■□□ 2.58
PARVB-202ENST00000402876 GRIN2AQ12879 1464 aa31.16■■■□□ 2.58
PARVB-202ENST00000402876 CHMP7Q8WUX9 453 aaPredicted RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms