RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 CHD1O14646 1710 aa31.06■■■□□ 2.56
AC008060.1-201ENST00000401499 RANGAP1P46060 587 aaPredicted RBP31.04■■■□□ 2.56
AC008060.1-201ENST00000401499 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
AC008060.1-201ENST00000401499 FBLN2P98095 1184 aa31■■■□□ 2.55
AC008060.1-201ENST00000401499 IQGAP2Q13576 1575 aa30.98■■■□□ 2.55
AC008060.1-201ENST00000401499 NUP160Q12769 1436 aa30.97■■■□□ 2.55
AC008060.1-201ENST00000401499 ARHGAP35Q9NRY4 1499 aa30.97■■■□□ 2.55
AC008060.1-201ENST00000401499 KIAA0586Q9BVV6 1533 aa30.93■■■□□ 2.54
AC008060.1-201ENST00000401499 ARAP1Q96P48 1450 aa30.92■■■□□ 2.54
AC008060.1-201ENST00000401499 EFCAB5A4FU69 1503 aa30.88■■■□□ 2.53
AC008060.1-201ENST00000401499 SAMD9Q5K651 1589 aa30.87■■■□□ 2.53
AC008060.1-201ENST00000401499 UGGT2Q9NYU1 1516 aa30.82■■■□□ 2.52
AC008060.1-201ENST00000401499 VPS8Q8N3P4 1428 aa30.8■■■□□ 2.52
AC008060.1-201ENST00000401499 FHOD3Q2V2M9 1422 aa30.75■■■□□ 2.51
AC008060.1-201ENST00000401499 P3H3Q8IVL6 736 aa30.72■■■□□ 2.51
AC008060.1-201ENST00000401499 DISP1Q96F81 1524 aa30.7■■■□□ 2.51
AC008060.1-201ENST00000401499 KIAA0556O60303 1618 aa30.69■■■□□ 2.5
AC008060.1-201ENST00000401499 CLASP1Q7Z460 1538 aa30.69■■■□□ 2.5
AC008060.1-201ENST00000401499 SHROOM2Q13796 1616 aa30.65■■■□□ 2.5
AC008060.1-201ENST00000401499 JPH4Q96JJ6 628 aa30.62■■■□□ 2.49
AC008060.1-201ENST00000401499 PCF11O94913 1555 aaKnown RBP30.58■■■□□ 2.49
AC008060.1-201ENST00000401499 FMN1Q68DA7 1419 aa30.54■■■□□ 2.48
AC008060.1-201ENST00000401499 CARMIL2Q6F5E8 1435 aa30.52■■■□□ 2.48
AC008060.1-201ENST00000401499 PRG4Q92954 1404 aaPredicted RBP30.51■■■□□ 2.47
AC008060.1-201ENST00000401499 CASKIN1Q8WXD9 1431 aa30.47■■■□□ 2.47
AC008060.1-201ENST00000401499 FYCO1Q9BQS8 1478 aa30.47■■■□□ 2.47
AC008060.1-201ENST00000401499 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.47
AC008060.1-201ENST00000401499 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
AC008060.1-201ENST00000401499 LRRIQ1Q96JM4 1722 aa30.4■■■□□ 2.46
AC008060.1-201ENST00000401499 PPARGC1BQ86YN6 1023 aaKnown RBP30.4■■■□□ 2.46
AC008060.1-201ENST00000401499 CFAP43Q8NDM7 1665 aa30.37■■■□□ 2.45
AC008060.1-201ENST00000401499 TIAM1Q13009 1591 aa30.36■■■□□ 2.45
AC008060.1-201ENST00000401499 HECW1Q76N89 1606 aa30.34■■■□□ 2.45
AC008060.1-201ENST00000401499 TTBK1Q5TCY1 1321 aaPredicted RBP30.34■■■□□ 2.45
AC008060.1-201ENST00000401499 RAPGEF6Q8TEU7 1601 aa30.34■■■□□ 2.45
AC008060.1-201ENST00000401499 MAP3K1Q13233 1512 aa30.33■■■□□ 2.45
AC008060.1-201ENST00000401499 APLP2Q06481 763 aa30.33■■■□□ 2.45
AC008060.1-201ENST00000401499 ATP1B4Q9UN42 357 aaPredicted RBP30.29■■■□□ 2.44
AC008060.1-201ENST00000401499 PLB1Q6P1J6 1458 aa30.28■■■□□ 2.44
AC008060.1-201ENST00000401499 ABCA8O94911 1581 aa30.27■■■□□ 2.44
AC008060.1-201ENST00000401499 PTPRGP23470 1445 aa30.25■■■□□ 2.43
AC008060.1-201ENST00000401499 NUP153P49790 1475 aaKnown RBP30.24■■■□□ 2.43
AC008060.1-201ENST00000401499 KANK4Q5T7N3 995 aaPredicted RBP30.24■■■□□ 2.43
AC008060.1-201ENST00000401499 EPRSP07814 1512 aaKnown RBP30.21■■■□□ 2.43
AC008060.1-201ENST00000401499 CCDC18Q5T9S5 1454 aa30.2■■■□□ 2.43
AC008060.1-201ENST00000401499 LRRC9Q6ZRR7 1453 aa30.18■■■□□ 2.42
AC008060.1-201ENST00000401499 CDK13Q14004 1512 aaKnown RBP30.18■■■□□ 2.42
AC008060.1-201ENST00000401499 UACAQ9BZF9 1416 aa30.11■■■□□ 2.41
AC008060.1-201ENST00000401499 MAGI3Q5TCQ9 1506 aa30.1■■■□□ 2.41
AC008060.1-201ENST00000401499 ARID3CA6NKF2 412 aa30.09■■■□□ 2.41
AC008060.1-201ENST00000401499 ABCC2Q92887 1545 aa30.07■■■□□ 2.4
AC008060.1-201ENST00000401499 TRIM26Q12899 539 aaPredicted RBP30.06■■■□□ 2.4
AC008060.1-201ENST00000401499 EHBP1L1Q8N3D4 1523 aa30.04■■■□□ 2.4
AC008060.1-201ENST00000401499 ARHGEF11O15085 1522 aa30.03■■■□□ 2.4
AC008060.1-201ENST00000401499 ATP10BO94823 1461 aa30.01■■■□□ 2.4
AC008060.1-201ENST00000401499 UHRF1BP1LA0JNW5 1464 aa30.01■■■□□ 2.39
AC008060.1-201ENST00000401499 MTUS2Q5JR59 1369 aa30■■■□□ 2.39
AC008060.1-201ENST00000401499 ADCY10Q96PN6 1610 aa29.97■■■□□ 2.39
AC008060.1-201ENST00000401499 SUPT6HQ7KZ85 1726 aaKnown RBP29.95■■■□□ 2.38
AC008060.1-201ENST00000401499 PCGF6Q9BYE7 350 aa29.94■■■□□ 2.38
AC008060.1-201ENST00000401499 RIMBP3CA6NJZ7 1639 aa29.94■■■□□ 2.38
AC008060.1-201ENST00000401499 RIMBP3BA6NNM3 1639 aa29.94■■■□□ 2.38
AC008060.1-201ENST00000401499 RIMBP3Q9UFD9 1639 aa29.94■■■□□ 2.38
AC008060.1-201ENST00000401499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.91■■■□□ 2.38
AC008060.1-201ENST00000401499 HNRNPUL2Q1KMD3 747 aaKnown RBP29.91■■■□□ 2.38
AC008060.1-201ENST00000401499 ZCCHC11Q5TAX3 1644 aaKnown RBP29.9■■■□□ 2.38
AC008060.1-201ENST00000401499 PHLDB1Q86UU1 1377 aa29.89■■■□□ 2.38
AC008060.1-201ENST00000401499 NCOA2Q15596 1464 aa29.89■■■□□ 2.37
AC008060.1-201ENST00000401499 KDM5BQ9UGL1 1544 aa29.88■■■□□ 2.37
AC008060.1-201ENST00000401499 TROQ12816 1431 aaPredicted RBP29.87■■■□□ 2.37
AC008060.1-201ENST00000401499 CDK11AQ9UQ88 783 aaPredicted RBP29.86■■■□□ 2.37
AC008060.1-201ENST00000401499 RRBP1Q9P2E9 1410 aaKnown RBP29.82■■■□□ 2.36
AC008060.1-201ENST00000401499 KIF14Q15058 1648 aa29.81■■■□□ 2.36
AC008060.1-201ENST00000401499 PLEKHD1A6NEE1 506 aa29.77■■■□□ 2.36
AC008060.1-201ENST00000401499 MYOM3Q5VTT5 1437 aa29.73■■■□□ 2.35
AC008060.1-201ENST00000401499 CCNB3Q8WWL7 1395 aa29.72■■■□□ 2.35
AC008060.1-201ENST00000401499 FGD6Q6ZV73 1430 aa29.7■■■□□ 2.34
AC008060.1-201ENST00000401499 ABCC10Q5T3U5 1492 aa29.67■■■□□ 2.34
AC008060.1-201ENST00000401499 CYB5RLQ6IPT4 315 aa29.64■■■□□ 2.34
AC008060.1-201ENST00000401499 ITSN2Q9NZM3 1697 aa29.63■■■□□ 2.33
AC008060.1-201ENST00000401499 CDC42BPAQ5VT25 1732 aa29.62■■■□□ 2.33
AC008060.1-201ENST00000401499 PTPN23Q9H3S7 1636 aa29.61■■■□□ 2.33
AC008060.1-201ENST00000401499 WDR7Q9Y4E6 1490 aa29.61■■■□□ 2.33
AC008060.1-201ENST00000401499 TTC37Q6PGP7 1564 aa29.59■■■□□ 2.33
AC008060.1-201ENST00000401499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.59■■■□□ 2.33
AC008060.1-201ENST00000401499 GPATCH8Q9UKJ3 1502 aaKnown RBP29.59■■■□□ 2.33
AC008060.1-201ENST00000401499 MIA2Q96PC5 1412 aa29.58■■■□□ 2.33
AC008060.1-201ENST00000401499 ASXL2Q76L83 1435 aa29.57■■■□□ 2.32
AC008060.1-201ENST00000401499 TCOF1Q13428 1488 aaKnown RBP29.56■■■□□ 2.32
AC008060.1-201ENST00000401499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.55■■■□□ 2.32
AC008060.1-201ENST00000401499 NPM1P06748 294 aaKnown RBP eCLIP29.54■■■□□ 2.32
AC008060.1-201ENST00000401499 FAM50AQ14320 339 aaKnown RBP29.52■■■□□ 2.32
AC008060.1-201ENST00000401499 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
AC008060.1-201ENST00000401499 KCNH8Q96L42 1107 aa29.51■■■□□ 2.31
AC008060.1-201ENST00000401499 CDC42BPBQ9Y5S2 1711 aa29.5■■■□□ 2.31
AC008060.1-201ENST00000401499 MYO5CQ9NQX4 1742 aa29.49■■■□□ 2.31
AC008060.1-201ENST00000401499 MAPKBP1O60336 1514 aa29.48■■■□□ 2.31
AC008060.1-201ENST00000401499 ABCA9Q8IUA7 1624 aa29.45■■■□□ 2.3
AC008060.1-201ENST00000401499 CFDP1Q9UEE9 299 aaPredicted RBP29.43■■■□□ 2.3
AC008060.1-201ENST00000401499 CAMSAP2Q08AD1 1489 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms