RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 NISCHQ9Y2I1 1504 aa45.13■■■■■ 4.82
AC008060.1-201ENST00000401499 CCDC180Q9P1Z9 1646 aa39.61■■■■□ 3.93
AC008060.1-201ENST00000401499 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
AC008060.1-201ENST00000401499 ABCC9O60706 1549 aa37.71■■■■□ 3.63
AC008060.1-201ENST00000401499 DCAF1Q9Y4B6 1507 aa37.34■■■■□ 3.57
AC008060.1-201ENST00000401499 DCAF8L2P0C7V8 631 aa37.22■■■■□ 3.55
AC008060.1-201ENST00000401499 MYO15BQ96JP2 1530 aa37.04■■■■□ 3.52
AC008060.1-201ENST00000401499 NACADO15069 1562 aa36.91■■■■□ 3.5
AC008060.1-201ENST00000401499 RB1CC1Q8TDY2 1594 aa36.69■■■■□ 3.46
AC008060.1-201ENST00000401499 SHROOM4Q9ULL8 1493 aa36.46■■■■□ 3.43
AC008060.1-201ENST00000401499 SCRIBQ14160 1630 aa36.33■■■■□ 3.41
AC008060.1-201ENST00000401499 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
AC008060.1-201ENST00000401499 BICRAQ9NZM4 1560 aa35.66■■■■□ 3.3
AC008060.1-201ENST00000401499 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
AC008060.1-201ENST00000401499 CECR2Q9BXF3 1484 aa35.1■■■■□ 3.21
AC008060.1-201ENST00000401499 BAZ1AQ9NRL2 1556 aaPredicted RBP34.88■■■■□ 3.17
AC008060.1-201ENST00000401499 MROH2BQ7Z745 1585 aa34.86■■■■□ 3.17
AC008060.1-201ENST00000401499 RSF1Q96T23 1441 aaPredicted RBP34.84■■■■□ 3.17
AC008060.1-201ENST00000401499 SUPT5HO00267 1087 aaKnown RBP34.83■■■■□ 3.17
AC008060.1-201ENST00000401499 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
AC008060.1-201ENST00000401499 WIZO95785 1651 aa34.58■■■■□ 3.13
AC008060.1-201ENST00000401499 EIF4G1Q04637 1599 aaKnown RBP34.58■■■■□ 3.13
AC008060.1-201ENST00000401499 PEG3Q9GZU2 1588 aa34.41■■■■□ 3.1
AC008060.1-201ENST00000401499 ATAD2BQ9ULI0 1458 aa34.29■■■■□ 3.08
AC008060.1-201ENST00000401499 SMARCA2P51531 1590 aa34.26■■■■□ 3.08
AC008060.1-201ENST00000401499 TOP2AP11388 1531 aaKnown RBP34.2■■■■□ 3.07
AC008060.1-201ENST00000401499 CC2D2AQ9P2K1 1620 aa34.17■■■■□ 3.06
AC008060.1-201ENST00000401499 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
AC008060.1-201ENST00000401499 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
AC008060.1-201ENST00000401499 HMGXB3Q12766 1538 aa34.02■■■■□ 3.04
AC008060.1-201ENST00000401499 CCDC88BA6NC98 1476 aa33.81■■■■□ 3
AC008060.1-201ENST00000401499 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
AC008060.1-201ENST00000401499 CFTRP13569 1480 aa33.2■■■□□ 2.9
AC008060.1-201ENST00000401499 CHIC1Q5VXU3 224 aa33.18■■■□□ 2.9
AC008060.1-201ENST00000401499 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
AC008060.1-201ENST00000401499 PRDM2Q13029 1718 aa33.12■■■□□ 2.89
AC008060.1-201ENST00000401499 NESP48681 1621 aa33.02■■■□□ 2.88
AC008060.1-201ENST00000401499 ABCC8Q09428 1581 aa33■■■□□ 2.87
AC008060.1-201ENST00000401499 LAMC3Q9Y6N6 1575 aa32.99■■■□□ 2.87
AC008060.1-201ENST00000401499 WRNQ14191 1432 aaPredicted RBP eCLIP32.79■■■□□ 2.84
AC008060.1-201ENST00000401499 FANCD2Q9BXW9 1451 aa32.78■■■□□ 2.84
AC008060.1-201ENST00000401499 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
AC008060.1-201ENST00000401499 SYNJ1O43426 1573 aa32.74■■■□□ 2.83
AC008060.1-201ENST00000401499 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
AC008060.1-201ENST00000401499 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
AC008060.1-201ENST00000401499 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
AC008060.1-201ENST00000401499 CUX1P39880 1505 aa32.63■■■□□ 2.81
AC008060.1-201ENST00000401499 TOP2BQ02880 1626 aa32.63■■■□□ 2.81
AC008060.1-201ENST00000401499 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
AC008060.1-201ENST00000401499 DNMBPQ6XZF7 1577 aa32.46■■■□□ 2.79
AC008060.1-201ENST00000401499 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
AC008060.1-201ENST00000401499 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
AC008060.1-201ENST00000401499 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
AC008060.1-201ENST00000401499 MRC2Q9UBG0 1479 aa32.33■■■□□ 2.77
AC008060.1-201ENST00000401499 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
AC008060.1-201ENST00000401499 SOGA1O94964 1423 aa32.26■■■□□ 2.75
AC008060.1-201ENST00000401499 THOC2Q8NI27 1593 aaKnown RBP32.25■■■□□ 2.75
AC008060.1-201ENST00000401499 POLA1P09884 1462 aaPredicted RBP32.22■■■□□ 2.75
AC008060.1-201ENST00000401499 WDR62O43379 1518 aa32.22■■■□□ 2.75
AC008060.1-201ENST00000401499 RUSC2Q8N2Y8 1516 aa32.19■■■□□ 2.74
AC008060.1-201ENST00000401499 FAM9AQ8IZU1 332 aaPredicted RBP32.17■■■□□ 2.74
AC008060.1-201ENST00000401499 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
AC008060.1-201ENST00000401499 EEA1Q15075 1411 aa32.09■■■□□ 2.73
AC008060.1-201ENST00000401499 WDR97A6NE52 1622 aa32.05■■■□□ 2.72
AC008060.1-201ENST00000401499 ABCA10Q8WWZ4 1543 aa32.02■■■□□ 2.72
AC008060.1-201ENST00000401499 CUX2O14529 1486 aa32■■■□□ 2.71
AC008060.1-201ENST00000401499 TARBP1Q13395 1621 aaKnown RBP32■■■□□ 2.71
AC008060.1-201ENST00000401499 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
AC008060.1-201ENST00000401499 CSRNP3Q8WYN3 585 aa31.91■■■□□ 2.7
AC008060.1-201ENST00000401499 LOC105371045A0A1W2PR82 267 aa31.87■■■□□ 2.69
AC008060.1-201ENST00000401499 IFT140Q96RY7 1462 aa31.86■■■□□ 2.69
AC008060.1-201ENST00000401499 ABCA5Q8WWZ7 1642 aa31.85■■■□□ 2.69
AC008060.1-201ENST00000401499 TDRD9Q8NDG6 1382 aaKnown RBP31.78■■■□□ 2.68
AC008060.1-201ENST00000401499 KIF21BO75037 1637 aa31.77■■■□□ 2.68
AC008060.1-201ENST00000401499 IGF1RP08069 1367 aa31.73■■■□□ 2.67
AC008060.1-201ENST00000401499 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
AC008060.1-201ENST00000401499 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
AC008060.1-201ENST00000401499 EHMT2Q96KQ7 1210 aa31.72■■■□□ 2.67
AC008060.1-201ENST00000401499 PRXQ9BXM0 1461 aa31.71■■■□□ 2.67
AC008060.1-201ENST00000401499 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
AC008060.1-201ENST00000401499 AQRO60306 1485 aaKnown RBP eCLIP31.66■■■□□ 2.66
AC008060.1-201ENST00000401499 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
AC008060.1-201ENST00000401499 GOLGA3Q08378 1498 aa31.65■■■□□ 2.66
AC008060.1-201ENST00000401499 ERICH3Q5RHP9 1530 aa31.64■■■□□ 2.66
AC008060.1-201ENST00000401499 RAPGEF2Q9Y4G8 1499 aa31.64■■■□□ 2.65
AC008060.1-201ENST00000401499 CUL7Q14999 1698 aa31.6■■■□□ 2.65
AC008060.1-201ENST00000401499 CARMIL1Q5VZK9 1371 aa31.56■■■□□ 2.64
AC008060.1-201ENST00000401499 GRIN2BQ13224 1484 aa31.53■■■□□ 2.64
AC008060.1-201ENST00000401499 ADAMTS12P58397 1594 aa31.46■■■□□ 2.63
AC008060.1-201ENST00000401499 TNIKQ9UKE5 1360 aa31.45■■■□□ 2.63
AC008060.1-201ENST00000401499 UBTFP17480 764 aaKnown RBP31.43■■■□□ 2.62
AC008060.1-201ENST00000401499 SNAPC4Q5SXM2 1469 aa31.39■■■□□ 2.62
AC008060.1-201ENST00000401499 FHAD1B1AJZ9 1412 aa31.37■■■□□ 2.61
AC008060.1-201ENST00000401499 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
AC008060.1-201ENST00000401499 CEP162Q5TB80 1403 aa31.28■■■□□ 2.6
AC008060.1-201ENST00000401499 CTTNBP2Q8WZ74 1663 aa31.23■■■□□ 2.59
AC008060.1-201ENST00000401499 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
AC008060.1-201ENST00000401499 GRIN2AQ12879 1464 aa31.17■■■□□ 2.58
AC008060.1-201ENST00000401499 CLIP1P30622 1438 aa31.12■■■□□ 2.57
AC008060.1-201ENST00000401499 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms