RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 NISCHQ9Y2I1 1504 aa45.13■■■■■ 4.82
AC008060.1-201ENST00000401499 CCDC180Q9P1Z9 1646 aa39.61■■■■□ 3.93
AC008060.1-201ENST00000401499 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
AC008060.1-201ENST00000401499 ABCC9O60706 1549 aa37.71■■■■□ 3.63
AC008060.1-201ENST00000401499 DCAF1Q9Y4B6 1507 aa37.34■■■■□ 3.57
AC008060.1-201ENST00000401499 DCAF8L2P0C7V8 631 aa37.22■■■■□ 3.55
AC008060.1-201ENST00000401499 MYO15BQ96JP2 1530 aa37.04■■■■□ 3.52
AC008060.1-201ENST00000401499 NACADO15069 1562 aa36.91■■■■□ 3.5
AC008060.1-201ENST00000401499 RB1CC1Q8TDY2 1594 aa36.69■■■■□ 3.46
AC008060.1-201ENST00000401499 SHROOM4Q9ULL8 1493 aa36.46■■■■□ 3.43
AC008060.1-201ENST00000401499 SCRIBQ14160 1630 aa36.33■■■■□ 3.41
AC008060.1-201ENST00000401499 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
AC008060.1-201ENST00000401499 BICRAQ9NZM4 1560 aa35.66■■■■□ 3.3
AC008060.1-201ENST00000401499 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
AC008060.1-201ENST00000401499 CECR2Q9BXF3 1484 aa35.1■■■■□ 3.21
AC008060.1-201ENST00000401499 BAZ1AQ9NRL2 1556 aaPredicted RBP34.88■■■■□ 3.17
AC008060.1-201ENST00000401499 MROH2BQ7Z745 1585 aa34.86■■■■□ 3.17
AC008060.1-201ENST00000401499 RSF1Q96T23 1441 aaPredicted RBP34.84■■■■□ 3.17
AC008060.1-201ENST00000401499 SUPT5HO00267 1087 aaKnown RBP34.83■■■■□ 3.17
AC008060.1-201ENST00000401499 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
AC008060.1-201ENST00000401499 WIZO95785 1651 aa34.58■■■■□ 3.13
AC008060.1-201ENST00000401499 EIF4G1Q04637 1599 aaKnown RBP34.58■■■■□ 3.13
AC008060.1-201ENST00000401499 PEG3Q9GZU2 1588 aa34.41■■■■□ 3.1
AC008060.1-201ENST00000401499 ATAD2BQ9ULI0 1458 aa34.29■■■■□ 3.08
AC008060.1-201ENST00000401499 SMARCA2P51531 1590 aa34.26■■■■□ 3.08
AC008060.1-201ENST00000401499 TOP2AP11388 1531 aaKnown RBP34.2■■■■□ 3.07
AC008060.1-201ENST00000401499 CC2D2AQ9P2K1 1620 aa34.17■■■■□ 3.06
AC008060.1-201ENST00000401499 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
AC008060.1-201ENST00000401499 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
AC008060.1-201ENST00000401499 HMGXB3Q12766 1538 aa34.02■■■■□ 3.04
AC008060.1-201ENST00000401499 CCDC88BA6NC98 1476 aa33.81■■■■□ 3
AC008060.1-201ENST00000401499 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
AC008060.1-201ENST00000401499 CFTRP13569 1480 aa33.2■■■□□ 2.9
AC008060.1-201ENST00000401499 CHIC1Q5VXU3 224 aa33.18■■■□□ 2.9
AC008060.1-201ENST00000401499 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
AC008060.1-201ENST00000401499 PRDM2Q13029 1718 aa33.12■■■□□ 2.89
AC008060.1-201ENST00000401499 NESP48681 1621 aa33.02■■■□□ 2.88
AC008060.1-201ENST00000401499 ABCC8Q09428 1581 aa33■■■□□ 2.87
AC008060.1-201ENST00000401499 LAMC3Q9Y6N6 1575 aa32.99■■■□□ 2.87
AC008060.1-201ENST00000401499 WRNQ14191 1432 aaPredicted RBP eCLIP32.79■■■□□ 2.84
AC008060.1-201ENST00000401499 FANCD2Q9BXW9 1451 aa32.78■■■□□ 2.84
AC008060.1-201ENST00000401499 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
AC008060.1-201ENST00000401499 SYNJ1O43426 1573 aa32.74■■■□□ 2.83
AC008060.1-201ENST00000401499 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
AC008060.1-201ENST00000401499 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
AC008060.1-201ENST00000401499 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
AC008060.1-201ENST00000401499 CUX1P39880 1505 aa32.63■■■□□ 2.81
AC008060.1-201ENST00000401499 TOP2BQ02880 1626 aa32.63■■■□□ 2.81
AC008060.1-201ENST00000401499 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
AC008060.1-201ENST00000401499 DNMBPQ6XZF7 1577 aa32.46■■■□□ 2.79
AC008060.1-201ENST00000401499 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
AC008060.1-201ENST00000401499 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
AC008060.1-201ENST00000401499 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
AC008060.1-201ENST00000401499 MRC2Q9UBG0 1479 aa32.33■■■□□ 2.77
AC008060.1-201ENST00000401499 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
AC008060.1-201ENST00000401499 SOGA1O94964 1423 aa32.26■■■□□ 2.75
AC008060.1-201ENST00000401499 THOC2Q8NI27 1593 aaKnown RBP32.25■■■□□ 2.75
AC008060.1-201ENST00000401499 POLA1P09884 1462 aaPredicted RBP32.22■■■□□ 2.75
AC008060.1-201ENST00000401499 WDR62O43379 1518 aa32.22■■■□□ 2.75
AC008060.1-201ENST00000401499 RUSC2Q8N2Y8 1516 aa32.19■■■□□ 2.74
AC008060.1-201ENST00000401499 FAM9AQ8IZU1 332 aaPredicted RBP32.17■■■□□ 2.74
AC008060.1-201ENST00000401499 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
AC008060.1-201ENST00000401499 EEA1Q15075 1411 aa32.09■■■□□ 2.73
AC008060.1-201ENST00000401499 WDR97A6NE52 1622 aa32.05■■■□□ 2.72
AC008060.1-201ENST00000401499 ABCA10Q8WWZ4 1543 aa32.02■■■□□ 2.72
AC008060.1-201ENST00000401499 CUX2O14529 1486 aa32■■■□□ 2.71
AC008060.1-201ENST00000401499 TARBP1Q13395 1621 aaKnown RBP32■■■□□ 2.71
AC008060.1-201ENST00000401499 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
AC008060.1-201ENST00000401499 CSRNP3Q8WYN3 585 aa31.91■■■□□ 2.7
AC008060.1-201ENST00000401499 LOC105371045A0A1W2PR82 267 aa31.87■■■□□ 2.69
AC008060.1-201ENST00000401499 IFT140Q96RY7 1462 aa31.86■■■□□ 2.69
AC008060.1-201ENST00000401499 ABCA5Q8WWZ7 1642 aa31.85■■■□□ 2.69
AC008060.1-201ENST00000401499 TDRD9Q8NDG6 1382 aaKnown RBP31.78■■■□□ 2.68
AC008060.1-201ENST00000401499 KIF21BO75037 1637 aa31.77■■■□□ 2.68
AC008060.1-201ENST00000401499 IGF1RP08069 1367 aa31.73■■■□□ 2.67
AC008060.1-201ENST00000401499 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
AC008060.1-201ENST00000401499 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
AC008060.1-201ENST00000401499 EHMT2Q96KQ7 1210 aa31.72■■■□□ 2.67
AC008060.1-201ENST00000401499 PRXQ9BXM0 1461 aa31.71■■■□□ 2.67
AC008060.1-201ENST00000401499 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
AC008060.1-201ENST00000401499 AQRO60306 1485 aaKnown RBP eCLIP31.66■■■□□ 2.66
AC008060.1-201ENST00000401499 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
AC008060.1-201ENST00000401499 GOLGA3Q08378 1498 aa31.65■■■□□ 2.66
AC008060.1-201ENST00000401499 ERICH3Q5RHP9 1530 aa31.64■■■□□ 2.66
AC008060.1-201ENST00000401499 RAPGEF2Q9Y4G8 1499 aa31.64■■■□□ 2.65
AC008060.1-201ENST00000401499 CUL7Q14999 1698 aa31.6■■■□□ 2.65
AC008060.1-201ENST00000401499 CARMIL1Q5VZK9 1371 aa31.56■■■□□ 2.64
AC008060.1-201ENST00000401499 GRIN2BQ13224 1484 aa31.53■■■□□ 2.64
AC008060.1-201ENST00000401499 ADAMTS12P58397 1594 aa31.46■■■□□ 2.63
AC008060.1-201ENST00000401499 TNIKQ9UKE5 1360 aa31.45■■■□□ 2.63
AC008060.1-201ENST00000401499 UBTFP17480 764 aaKnown RBP31.43■■■□□ 2.62
AC008060.1-201ENST00000401499 SNAPC4Q5SXM2 1469 aa31.39■■■□□ 2.62
AC008060.1-201ENST00000401499 FHAD1B1AJZ9 1412 aa31.37■■■□□ 2.61
AC008060.1-201ENST00000401499 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
AC008060.1-201ENST00000401499 CEP162Q5TB80 1403 aa31.28■■■□□ 2.6
AC008060.1-201ENST00000401499 CTTNBP2Q8WZ74 1663 aa31.23■■■□□ 2.59
AC008060.1-201ENST00000401499 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
AC008060.1-201ENST00000401499 GRIN2AQ12879 1464 aa31.17■■■□□ 2.58
AC008060.1-201ENST00000401499 CLIP1P30622 1438 aa31.12■■■□□ 2.57
AC008060.1-201ENST00000401499 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms