RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
USP16-203ENST00000399975 CHMP7Q8WUX9 453 aaPredicted RBP11.1□□□□□ -0.63
USP16-203ENST00000399975 UGGT2Q9NYU1 1516 aa11.09□□□□□ -0.63
USP16-203ENST00000399975 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
USP16-203ENST00000399975 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
USP16-203ENST00000399975 SAMD9Q5K651 1589 aa11.08□□□□□ -0.64
USP16-203ENST00000399975 UBTFP17480 764 aaKnown RBP11.07□□□□□ -0.64
USP16-203ENST00000399975 CEP162Q5TB80 1403 aa11.06□□□□□ -0.64
USP16-203ENST00000399975 CLIP1P30622 1438 aa11.02□□□□□ -0.64
USP16-203ENST00000399975 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
USP16-203ENST00000399975 KIAA0556O60303 1618 aa11.01□□□□□ -0.65
USP16-203ENST00000399975 DISP1Q96F81 1524 aa11□□□□□ -0.65
USP16-203ENST00000399975 FBLN2P98095 1184 aa11□□□□□ -0.65
USP16-203ENST00000399975 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
USP16-203ENST00000399975 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
USP16-203ENST00000399975 JPH4Q96JJ6 628 aa10.96□□□□□ -0.66
USP16-203ENST00000399975 CARMIL2Q6F5E8 1435 aa10.96□□□□□ -0.66
USP16-203ENST00000399975 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
USP16-203ENST00000399975 VPS8Q8N3P4 1428 aa10.94□□□□□ -0.66
USP16-203ENST00000399975 PRG4Q92954 1404 aaPredicted RBP10.93□□□□□ -0.66
USP16-203ENST00000399975 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
USP16-203ENST00000399975 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.66
USP16-203ENST00000399975 FYCO1Q9BQS8 1478 aa10.9□□□□□ -0.67
USP16-203ENST00000399975 CASKIN1Q8WXD9 1431 aa10.89□□□□□ -0.67
USP16-203ENST00000399975 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
USP16-203ENST00000399975 MAP3K1Q13233 1512 aa10.89□□□□□ -0.67
USP16-203ENST00000399975 ABCA8O94911 1581 aa10.89□□□□□ -0.67
USP16-203ENST00000399975 PCF11O94913 1555 aaKnown RBP10.88□□□□□ -0.67
USP16-203ENST00000399975 RAPGEF6Q8TEU7 1601 aa10.87□□□□□ -0.67
USP16-203ENST00000399975 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
USP16-203ENST00000399975 UHRF1BP1LA0JNW5 1464 aa10.86□□□□□ -0.67
USP16-203ENST00000399975 CFAP43Q8NDM7 1665 aa10.86□□□□□ -0.67
USP16-203ENST00000399975 LRRIQ1Q96JM4 1722 aa10.85□□□□□ -0.67
USP16-203ENST00000399975 PTPRGP23470 1445 aa10.84□□□□□ -0.67
USP16-203ENST00000399975 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
USP16-203ENST00000399975 CCDC18Q5T9S5 1454 aa10.83□□□□□ -0.68
USP16-203ENST00000399975 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
USP16-203ENST00000399975 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
USP16-203ENST00000399975 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
USP16-203ENST00000399975 ABCC2Q92887 1545 aa10.82□□□□□ -0.68
USP16-203ENST00000399975 RANGAP1P46060 587 aaPredicted RBP10.82□□□□□ -0.68
USP16-203ENST00000399975 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
USP16-203ENST00000399975 TIAM1Q13009 1591 aa10.81□□□□□ -0.68
USP16-203ENST00000399975 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
USP16-203ENST00000399975 NUP153P49790 1475 aaKnown RBP10.8□□□□□ -0.68
USP16-203ENST00000399975 PLB1Q6P1J6 1458 aa10.79□□□□□ -0.68
USP16-203ENST00000399975 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
USP16-203ENST00000399975 ADCY10Q96PN6 1610 aa10.78□□□□□ -0.68
USP16-203ENST00000399975 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
USP16-203ENST00000399975 ZCCHC11Q5TAX3 1644 aaKnown RBP10.75□□□□□ -0.69
USP16-203ENST00000399975 ATP10BO94823 1461 aa10.74□□□□□ -0.69
USP16-203ENST00000399975 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
USP16-203ENST00000399975 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
USP16-203ENST00000399975 CDK13Q14004 1512 aaKnown RBP10.72□□□□□ -0.69
USP16-203ENST00000399975 MAGI3Q5TCQ9 1506 aa10.71□□□□□ -0.69
USP16-203ENST00000399975 SUPT6HQ7KZ85 1726 aaKnown RBP10.7□□□□□ -0.7
USP16-203ENST00000399975 APLP2Q06481 763 aa10.7□□□□□ -0.7
USP16-203ENST00000399975 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
USP16-203ENST00000399975 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
USP16-203ENST00000399975 CDK11AQ9UQ88 783 aaPredicted RBP10.67□□□□□ -0.7
USP16-203ENST00000399975 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.7
USP16-203ENST00000399975 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
USP16-203ENST00000399975 KIF14Q15058 1648 aa10.65□□□□□ -0.7
USP16-203ENST00000399975 MTUS2Q5JR59 1369 aa10.64□□□□□ -0.71
USP16-203ENST00000399975 WDR7Q9Y4E6 1490 aa10.64□□□□□ -0.71
USP16-203ENST00000399975 ABCC10Q5T3U5 1492 aa10.64□□□□□ -0.71
USP16-203ENST00000399975 TTBK1Q5TCY1 1321 aaPredicted RBP10.64□□□□□ -0.71
USP16-203ENST00000399975 ATP1B4Q9UN42 357 aaPredicted RBP10.63□□□□□ -0.71
USP16-203ENST00000399975 NCOA2Q15596 1464 aa10.63□□□□□ -0.71
USP16-203ENST00000399975 ITSN2Q9NZM3 1697 aa10.63□□□□□ -0.71
USP16-203ENST00000399975 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
USP16-203ENST00000399975 ABCA9Q8IUA7 1624 aa10.62□□□□□ -0.71
USP16-203ENST00000399975 GLI2P10070 1586 aa10.62□□□□□ -0.71
USP16-203ENST00000399975 ASXL2Q76L83 1435 aa10.61□□□□□ -0.71
USP16-203ENST00000399975 ARAP3Q8WWN8 1544 aa10.61□□□□□ -0.71
USP16-203ENST00000399975 RRBP1Q9P2E9 1410 aaKnown RBP10.6□□□□□ -0.71
USP16-203ENST00000399975 CDC42BPAQ5VT25 1732 aa10.6□□□□□ -0.71
USP16-203ENST00000399975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.6□□□□□ -0.71
USP16-203ENST00000399975 CYB5RLQ6IPT4 315 aa10.6□□□□□ -0.71
USP16-203ENST00000399975 PREX2Q70Z35 1606 aa10.6□□□□□ -0.71
USP16-203ENST00000399975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP16-203ENST00000399975 MIA2Q96PC5 1412 aa10.59□□□□□ -0.71
USP16-203ENST00000399975 NPM1P06748 294 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP16-203ENST00000399975 MYOM3Q5VTT5 1437 aa10.59□□□□□ -0.71
USP16-203ENST00000399975 MYO5CQ9NQX4 1742 aa10.59□□□□□ -0.71
USP16-203ENST00000399975 TCOF1Q13428 1488 aaKnown RBP10.58□□□□□ -0.72
USP16-203ENST00000399975 PHLDB1Q86UU1 1377 aa10.58□□□□□ -0.72
USP16-203ENST00000399975 TTC37Q6PGP7 1564 aa10.58□□□□□ -0.72
USP16-203ENST00000399975 CDC42BPBQ9Y5S2 1711 aa10.57□□□□□ -0.72
USP16-203ENST00000399975 GPATCH8Q9UKJ3 1502 aaKnown RBP10.57□□□□□ -0.72
USP16-203ENST00000399975 MAP3K4Q9Y6R4 1608 aa10.56□□□□□ -0.72
USP16-203ENST00000399975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.56□□□□□ -0.72
USP16-203ENST00000399975 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
USP16-203ENST00000399975 DIP2BQ9P265 1576 aa10.55□□□□□ -0.72
USP16-203ENST00000399975 FGD6Q6ZV73 1430 aa10.55□□□□□ -0.72
USP16-203ENST00000399975 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
USP16-203ENST00000399975 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
USP16-203ENST00000399975 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
USP16-203ENST00000399975 CFAP74Q9C0B2 1584 aa10.54□□□□□ -0.72
USP16-203ENST00000399975 PLCH2O75038 1416 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms