RNA–Protein interactions for RNA: ENST00000399219.7

PMPCA-203, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2 BASIC

Gene PMPCA, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-203ENST00000399219 CTTNBP2Q8WZ74 1663 aa31.54■■■□□ 2.64
PMPCA-203ENST00000399219 RRBP1Q9P2E9 1410 aaKnown RBP31.53■■■□□ 2.64
PMPCA-203ENST00000399219 HNRNPUL2Q1KMD3 747 aaKnown RBP31.5■■■□□ 2.63
PMPCA-203ENST00000399219 TIAM1Q13009 1591 aa31.5■■■□□ 2.63
PMPCA-203ENST00000399219 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.639e-7■■■■■ 27.9
PMPCA-203ENST00000399219 WDR62O43379 1518 aa31.41■■■□□ 2.62
PMPCA-203ENST00000399219 FYCO1Q9BQS8 1478 aa31.4■■■□□ 2.62
PMPCA-203ENST00000399219 CASKIN1Q8WXD9 1431 aa31.38■■■□□ 2.61
PMPCA-203ENST00000399219 LRRC9Q6ZRR7 1453 aa31.38■■■□□ 2.61
PMPCA-203ENST00000399219 FMN1Q68DA7 1419 aa31.38■■■□□ 2.61
PMPCA-203ENST00000399219 FHOD3Q2V2M9 1422 aa31.37■■■□□ 2.61
PMPCA-203ENST00000399219 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
PMPCA-203ENST00000399219 CCNB3Q8WWL7 1395 aa31.36■■■□□ 2.61
PMPCA-203ENST00000399219 PCF11O94913 1555 aaKnown RBP31.36■■■□□ 2.61
PMPCA-203ENST00000399219 CFAP43Q8NDM7 1665 aa31.34■■■□□ 2.61
PMPCA-203ENST00000399219 SAMD9Q5K651 1589 aa31.33■■■□□ 2.61
PMPCA-203ENST00000399219 PBRM1Q86U86 1689 aa31.32■■■□□ 2.6
PMPCA-203ENST00000399219 GRIN2BQ13224 1484 aa31.31■■■□□ 2.6
PMPCA-203ENST00000399219 P3H3Q8IVL6 736 aa31.3■■■□□ 2.6
PMPCA-203ENST00000399219 ADAMTS12P58397 1594 aa31.26■■■□□ 2.59
PMPCA-203ENST00000399219 CLSPNQ9HAW4 1339 aa31.23■■■□□ 2.59
PMPCA-203ENST00000399219 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
PMPCA-203ENST00000399219 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
PMPCA-203ENST00000399219 THOC2Q8NI27 1593 aaKnown RBP31.15■■■□□ 2.58
PMPCA-203ENST00000399219 PHLDB1Q86UU1 1377 aa31.13■■■□□ 2.57
PMPCA-203ENST00000399219 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
PMPCA-203ENST00000399219 IQGAP2Q13576 1575 aa31.11■■■□□ 2.57
PMPCA-203ENST00000399219 ATP1B4Q9UN42 357 aaPredicted RBP31.1■■■□□ 2.57
PMPCA-203ENST00000399219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.07■■■□□ 2.57
PMPCA-203ENST00000399219 DHX57Q6P158 1386 aaKnown RBP31.06■■■□□ 2.56
PMPCA-203ENST00000399219 EIF4G3O43432 1585 aaKnown RBP31.01■■■□□ 2.55
PMPCA-203ENST00000399219 UGGT2Q9NYU1 1516 aa31■■■□□ 2.55
PMPCA-203ENST00000399219 KIAA0586Q9BVV6 1533 aa30.98■■■□□ 2.55
PMPCA-203ENST00000399219 MTUS2Q5JR59 1369 aa30.96■■■□□ 2.55
PMPCA-203ENST00000399219 CCDC18Q5T9S5 1454 aa30.96■■■□□ 2.55
PMPCA-203ENST00000399219 MAGI1Q96QZ7 1491 aaPredicted RBP30.96■■■□□ 2.55
PMPCA-203ENST00000399219 GRIN2AQ12879 1464 aa30.93■■■□□ 2.54
PMPCA-203ENST00000399219 EHBP1L1Q8N3D4 1523 aa30.89■■■□□ 2.54
PMPCA-203ENST00000399219 SETD5Q9C0A6 1442 aa30.89■■■□□ 2.53
PMPCA-203ENST00000399219 ITGAEP38570 1179 aa30.88■■■□□ 2.53
PMPCA-203ENST00000399219 HECW1Q76N89 1606 aa30.88■■■□□ 2.53
PMPCA-203ENST00000399219 LRRIQ1Q96JM4 1722 aa30.88■■■□□ 2.53
PMPCA-203ENST00000399219 FGD6Q6ZV73 1430 aa30.87■■■□□ 2.53
PMPCA-203ENST00000399219 RAB3GAP2Q9H2M9 1393 aa30.86■■■□□ 2.53
PMPCA-203ENST00000399219 ZNF316A6NFI3 1004 aaPredicted RBP30.86■■■□□ 2.53
PMPCA-203ENST00000399219 FAM50AQ14320 339 aaKnown RBP30.86■■■□□ 2.53
PMPCA-203ENST00000399219 SYNJ2O15056 1496 aa30.84■■■□□ 2.53
PMPCA-203ENST00000399219 NCOA2Q15596 1464 aa30.81■■■□□ 2.52
PMPCA-203ENST00000399219 SUPT6HQ7KZ85 1726 aaKnown RBP30.81■■■□□ 2.52
PMPCA-203ENST00000399219 DIEXFQ68CQ4 756 aaKnown RBP30.79■■■□□ 2.52
PMPCA-203ENST00000399219 MYOM3Q5VTT5 1437 aa30.79■■■□□ 2.52
PMPCA-203ENST00000399219 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
PMPCA-203ENST00000399219 EPRSP07814 1512 aaKnown RBP30.78■■■□□ 2.52
PMPCA-203ENST00000399219 KIAA0556O60303 1618 aa30.77■■■□□ 2.52
PMPCA-203ENST00000399219 DISP1Q96F81 1524 aa30.77■■■□□ 2.52
PMPCA-203ENST00000399219 CHMP7Q8WUX9 453 aaPredicted RBP30.74■■■□□ 2.51
PMPCA-203ENST00000399219 MAGI3Q5TCQ9 1506 aa30.69■■■□□ 2.5
PMPCA-203ENST00000399219 NUP160Q12769 1436 aa30.68■■■□□ 2.5
PMPCA-203ENST00000399219 CEP170Q5SW79 1584 aa30.66■■■□□ 2.5
PMPCA-203ENST00000399219 MAPKBP1O60336 1514 aa30.62■■■□□ 2.49
PMPCA-203ENST00000399219 TCOF1Q13428 1488 aaKnown RBP30.6■■■□□ 2.49
PMPCA-203ENST00000399219 HFM1A2PYH4 1435 aa30.6■■■□□ 2.49
PMPCA-203ENST00000399219 MIA2Q96PC5 1412 aa30.59■■■□□ 2.49
PMPCA-203ENST00000399219 CDK13Q14004 1512 aaKnown RBP30.58■■■□□ 2.49
PMPCA-203ENST00000399219 PTPN23Q9H3S7 1636 aa30.58■■■□□ 2.49
PMPCA-203ENST00000399219 RAPGEF6Q8TEU7 1601 aa30.56■■■□□ 2.48
PMPCA-203ENST00000399219 CARMIL2Q6F5E8 1435 aa30.56■■■□□ 2.48
PMPCA-203ENST00000399219 NUP153P49790 1475 aaKnown RBP30.55■■■□□ 2.48
PMPCA-203ENST00000399219 PTPRKQ15262 1439 aa30.52■■■□□ 2.48
PMPCA-203ENST00000399219 CDK11AQ9UQ88 783 aaPredicted RBP30.52■■■□□ 2.48
PMPCA-203ENST00000399219 FBLN2P98095 1184 aa30.51■■■□□ 2.47
PMPCA-203ENST00000399219 JPH4Q96JJ6 628 aa30.5■■■□□ 2.47
PMPCA-203ENST00000399219 TIMELESSQ9UNS1 1208 aa30.5■■■□□ 2.47
PMPCA-203ENST00000399219 AKNAQ7Z591 1439 aa30.45■■■□□ 2.47
PMPCA-203ENST00000399219 NAIPQ13075 1403 aa30.45■■■□□ 2.46
PMPCA-203ENST00000399219 UACAQ9BZF9 1416 aa30.42■■■□□ 2.46
PMPCA-203ENST00000399219 TROQ12816 1431 aaPredicted RBP30.36■■■□□ 2.45
PMPCA-203ENST00000399219 PLB1Q6P1J6 1458 aa30.36■■■□□ 2.45
PMPCA-203ENST00000399219 ARID3CA6NKF2 412 aa30.33■■■□□ 2.45
PMPCA-203ENST00000399219 ACIN1Q9UKV3 1341 aaKnown RBP30.33■■■□□ 2.45
PMPCA-203ENST00000399219 GCC2Q8IWJ2 1684 aa30.29■■■□□ 2.44
PMPCA-203ENST00000399219 ABCA8O94911 1581 aa30.28■■■□□ 2.44
PMPCA-203ENST00000399219 ROCK1Q13464 1354 aa30.26■■■□□ 2.43
PMPCA-203ENST00000399219 ADCY10Q96PN6 1610 aa30.25■■■□□ 2.43
PMPCA-203ENST00000399219 SIN3AQ96ST3 1273 aa30.24■■■□□ 2.43
PMPCA-203ENST00000399219 PRG4Q92954 1404 aaPredicted RBP30.24■■■□□ 2.43
PMPCA-203ENST00000399219 DAPK1P53355 1430 aa30.21■■■□□ 2.43
PMPCA-203ENST00000399219 DNMT1P26358 1616 aaKnown RBP30.2■■■□□ 2.42
PMPCA-203ENST00000399219 ITSN2Q9NZM3 1697 aa30.19■■■□□ 2.42
PMPCA-203ENST00000399219 NEUROD1Q13562 356 aa30.19■■■□□ 2.42
PMPCA-203ENST00000399219 RRP7BPQ9NSQ0 103 aa30.17■■■□□ 2.42
PMPCA-203ENST00000399219 ABCC5O15440 1437 aa30.16■■■□□ 2.42
PMPCA-203ENST00000399219 CHIC2Q9UKJ5 165 aa30.15■■■□□ 2.42
PMPCA-203ENST00000399219 GPATCH8Q9UKJ3 1502 aaKnown RBP30.15■■■□□ 2.42
PMPCA-203ENST00000399219 PTPRGP23470 1445 aa30.14■■■□□ 2.42
PMPCA-203ENST00000399219 ATP10BO94823 1461 aa30.14■■■□□ 2.42
PMPCA-203ENST00000399219 MIER1Q8N108 512 aa30.14■■■□□ 2.41
PMPCA-203ENST00000399219 PLEKHD1A6NEE1 506 aa30.13■■■□□ 2.41
PMPCA-203ENST00000399219 CENPBP07199 599 aaPredicted RBP30.13■■■□□ 2.41
PMPCA-203ENST00000399219 CHD1O14646 1710 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms