RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 PRXQ9BXM0 1461 aa26.41■■□□□ 1.82
MBD1-207ENST00000398488 EEA1Q15075 1411 aa26.37■■□□□ 1.81
MBD1-207ENST00000398488 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
MBD1-207ENST00000398488 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
MBD1-207ENST00000398488 KIAA0586Q9BVV6 1533 aa26.32■■□□□ 1.8
MBD1-207ENST00000398488 JPH4Q96JJ6 628 aa26.3■■□□□ 1.8
MBD1-207ENST00000398488 ARAP1Q96P48 1450 aa26.28■■□□□ 1.8
MBD1-207ENST00000398488 PRG4Q92954 1404 aaPredicted RBP26.23■■□□□ 1.79
MBD1-207ENST00000398488 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
MBD1-207ENST00000398488 IQGAP2Q13576 1575 aa26.19■■□□□ 1.78
MBD1-207ENST00000398488 EHMT2Q96KQ7 1210 aa26.15■■□□□ 1.78
MBD1-207ENST00000398488 KIF21BO75037 1637 aa26.15■■□□□ 1.78
MBD1-207ENST00000398488 CTTNBP2Q8WZ74 1663 aa26.13■■□□□ 1.77
MBD1-207ENST00000398488 UGGT2Q9NYU1 1516 aa26.07■■□□□ 1.76
MBD1-207ENST00000398488 DISP1Q96F81 1524 aa26.07■■□□□ 1.76
MBD1-207ENST00000398488 GOLGA3Q08378 1498 aa26■■□□□ 1.75
MBD1-207ENST00000398488 CARMIL2Q6F5E8 1435 aa25.97■■□□□ 1.75
MBD1-207ENST00000398488 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
MBD1-207ENST00000398488 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
MBD1-207ENST00000398488 UBTFP17480 764 aaKnown RBP25.95■■□□□ 1.74
MBD1-207ENST00000398488 RANGAP1P46060 587 aaPredicted RBP25.94■■□□□ 1.74
MBD1-207ENST00000398488 TNIKQ9UKE5 1360 aa25.93■■□□□ 1.74
MBD1-207ENST00000398488 PTPRGP23470 1445 aa25.92■■□□□ 1.74
MBD1-207ENST00000398488 P3H3Q8IVL6 736 aa25.9■■□□□ 1.74
MBD1-207ENST00000398488 SAMD9Q5K651 1589 aa25.85■■□□□ 1.73
MBD1-207ENST00000398488 ADCY10Q96PN6 1610 aa25.83■■□□□ 1.72
MBD1-207ENST00000398488 LOC105371045A0A1W2PR82 267 aa25.78■■□□□ 1.72
MBD1-207ENST00000398488 FHOD3Q2V2M9 1422 aa25.76■■□□□ 1.71
MBD1-207ENST00000398488 PLB1Q6P1J6 1458 aa25.75■■□□□ 1.71
MBD1-207ENST00000398488 UACAQ9BZF9 1416 aa25.75■■□□□ 1.71
MBD1-207ENST00000398488 ARHGAP35Q9NRY4 1499 aa25.71■■□□□ 1.71
MBD1-207ENST00000398488 EFCAB5A4FU69 1503 aa25.7■■□□□ 1.71
MBD1-207ENST00000398488 UHRF1BP1LA0JNW5 1464 aa25.7■■□□□ 1.7
MBD1-207ENST00000398488 ABCA8O94911 1581 aa25.69■■□□□ 1.7
MBD1-207ENST00000398488 ABCC2Q92887 1545 aa25.69■■□□□ 1.7
MBD1-207ENST00000398488 NPM1P06748 294 aaKnown RBP eCLIP25.62■■□□□ 1.69
MBD1-207ENST00000398488 KDM5BQ9UGL1 1544 aa25.6■■□□□ 1.69
MBD1-207ENST00000398488 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
MBD1-207ENST00000398488 ARID3CA6NKF2 412 aa25.58■■□□□ 1.68
MBD1-207ENST00000398488 CLIP1P30622 1438 aa25.57■■□□□ 1.68
MBD1-207ENST00000398488 MAPKBP1O60336 1514 aa25.56■■□□□ 1.68
MBD1-207ENST00000398488 ZCCHC11Q5TAX3 1644 aaKnown RBP25.56■■□□□ 1.68
MBD1-207ENST00000398488 RAPGEF6Q8TEU7 1601 aa25.55■■□□□ 1.68
MBD1-207ENST00000398488 NUP153P49790 1475 aaKnown RBP25.51■■□□□ 1.67
MBD1-207ENST00000398488 CEP162Q5TB80 1403 aa25.51■■□□□ 1.67
MBD1-207ENST00000398488 ASXL2Q76L83 1435 aa25.51■■□□□ 1.67
MBD1-207ENST00000398488 ATP10BO94823 1461 aa25.5■■□□□ 1.67
MBD1-207ENST00000398488 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
MBD1-207ENST00000398488 ABCC10Q5T3U5 1492 aa25.45■■□□□ 1.67
MBD1-207ENST00000398488 KIF13AQ9H1H9 1805 aa25.45■■□□□ 1.66
MBD1-207ENST00000398488 DIP2BQ9P265 1576 aa25.43■■□□□ 1.66
MBD1-207ENST00000398488 FAM69CQ0P6D2 419 aa25.42■■□□□ 1.66
MBD1-207ENST00000398488 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
MBD1-207ENST00000398488 CDK13Q14004 1512 aaKnown RBP25.37■■□□□ 1.65
MBD1-207ENST00000398488 PCF11O94913 1555 aaKnown RBP25.37■■□□□ 1.65
MBD1-207ENST00000398488 WDR7Q9Y4E6 1490 aa25.37■■□□□ 1.65
MBD1-207ENST00000398488 EPRSP07814 1512 aaKnown RBP25.35■■□□□ 1.65
MBD1-207ENST00000398488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.35■■□□□ 1.65
MBD1-207ENST00000398488 HNRNPUL2Q1KMD3 747 aaKnown RBP25.35■■□□□ 1.65
MBD1-207ENST00000398488 LRRIQ1Q96JM4 1722 aa25.34■■□□□ 1.65
MBD1-207ENST00000398488 CASKIN1Q8WXD9 1431 aa25.34■■□□□ 1.65
MBD1-207ENST00000398488 KCNH8Q96L42 1107 aa25.33■■□□□ 1.65
MBD1-207ENST00000398488 HECW1Q76N89 1606 aa25.33■■□□□ 1.65
MBD1-207ENST00000398488 GLI2P10070 1586 aa25.29■■□□□ 1.64
MBD1-207ENST00000398488 FYCO1Q9BQS8 1478 aa25.25■■□□□ 1.63
MBD1-207ENST00000398488 TSPOAP1O95153 1857 aa25.23■■□□□ 1.63
MBD1-207ENST00000398488 PLEKHD1A6NEE1 506 aa25.22■■□□□ 1.63
MBD1-207ENST00000398488 MAP3K4Q9Y6R4 1608 aa25.2■■□□□ 1.63
MBD1-207ENST00000398488 PPRC1Q5VV67 1664 aaKnown RBP25.2■■□□□ 1.62
MBD1-207ENST00000398488 VPS8Q8N3P4 1428 aa25.17■■□□□ 1.62
MBD1-207ENST00000398488 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
MBD1-207ENST00000398488 CCDC18Q5T9S5 1454 aa25.15■■□□□ 1.62
MBD1-207ENST00000398488 CD109Q6YHK3 1445 aa25.13■■□□□ 1.61
MBD1-207ENST00000398488 ABCA9Q8IUA7 1624 aa25.12■■□□□ 1.61
MBD1-207ENST00000398488 CFAP43Q8NDM7 1665 aa25.11■■□□□ 1.61
MBD1-207ENST00000398488 TROQ12816 1431 aaPredicted RBP25.1■■□□□ 1.61
MBD1-207ENST00000398488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.1■■□□□ 1.61
MBD1-207ENST00000398488 KIF14Q15058 1648 aa25.09■■□□□ 1.61
MBD1-207ENST00000398488 CDK11AQ9UQ88 783 aaPredicted RBP25.09■■□□□ 1.61
MBD1-207ENST00000398488 TTC37Q6PGP7 1564 aa25.08■■□□□ 1.6
MBD1-207ENST00000398488 COL17A1Q9UMD9 1497 aaPredicted RBP25.01■■□□□ 1.59
MBD1-207ENST00000398488 TEX14Q8IWB6 1497 aa24.99■■□□□ 1.59
MBD1-207ENST00000398488 TIAM1Q13009 1591 aa24.98■■□□□ 1.59
MBD1-207ENST00000398488 MTUS2Q5JR59 1369 aa24.95■■□□□ 1.58
MBD1-207ENST00000398488 KDM6BO15054 1643 aa24.94■■□□□ 1.58
MBD1-207ENST00000398488 KANK4Q5T7N3 995 aaPredicted RBP24.94■■□□□ 1.58
MBD1-207ENST00000398488 PLCH2O75038 1416 aa24.93■■□□□ 1.58
MBD1-207ENST00000398488 EHBP1L1Q8N3D4 1523 aa24.9■■□□□ 1.58
MBD1-207ENST00000398488 MAP3K1Q13233 1512 aa24.89■■□□□ 1.58
MBD1-207ENST00000398488 MYO5CQ9NQX4 1742 aa24.89■■□□□ 1.57
MBD1-207ENST00000398488 FANCAO15360 1455 aa24.88■■□□□ 1.57
MBD1-207ENST00000398488 LRRC9Q6ZRR7 1453 aa24.88■■□□□ 1.57
MBD1-207ENST00000398488 NEO1Q92859 1461 aa24.87■■□□□ 1.57
MBD1-207ENST00000398488 CDC42BPBQ9Y5S2 1711 aa24.85■■□□□ 1.57
MBD1-207ENST00000398488 AKNAQ7Z591 1439 aa24.85■■□□□ 1.57
MBD1-207ENST00000398488 GPATCH8Q9UKJ3 1502 aaKnown RBP24.84■■□□□ 1.57
MBD1-207ENST00000398488 CDC42BPAQ5VT25 1732 aa24.84■■□□□ 1.57
MBD1-207ENST00000398488 ARAP3Q8WWN8 1544 aa24.84■■□□□ 1.57
MBD1-207ENST00000398488 PREX2Q70Z35 1606 aa24.82■■□□□ 1.56
MBD1-207ENST00000398488 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms