RNA–Protein interactions for RNA: ENST00000396618.7

COCH-202, Transcript of cochlin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COCH, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-202ENST00000396618 TIAM1Q13009 1591 aa21.52■■□□□ 1.04
COCH-202ENST00000396618 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
COCH-202ENST00000396618 CUX1P39880 1505 aa21.45■■□□□ 1.02
COCH-202ENST00000396618 FANCIQ9NVI1 1328 aa21.44■■□□□ 1.02
COCH-202ENST00000396618 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
COCH-202ENST00000396618 MSH5O43196 834 aa21.4■■□□□ 1.02
COCH-202ENST00000396618 ANP32CO43423 234 aa21.4■■□□□ 1.02
COCH-202ENST00000396618 ITGAEP38570 1179 aa21.4■■□□□ 1.02
COCH-202ENST00000396618 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
COCH-202ENST00000396618 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
COCH-202ENST00000396618 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
COCH-202ENST00000396618 TRIM52Q96A61 297 aa21.35■■□□□ 1.01
COCH-202ENST00000396618 PHLDB1Q86UU1 1377 aa21.33■■□□□ 1.01
COCH-202ENST00000396618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.3■■□□□ 18e-9■■■□□ 17.4
COCH-202ENST00000396618 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
COCH-202ENST00000396618 ERICH6BQ5W0A0 696 aa21.27■■□□□ 1
COCH-202ENST00000396618 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
COCH-202ENST00000396618 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
COCH-202ENST00000396618 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
COCH-202ENST00000396618 CFTRP13569 1480 aa21.2■□□□□ 0.98
COCH-202ENST00000396618 IGF1RP08069 1367 aa21.19■□□□□ 0.98
COCH-202ENST00000396618 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
COCH-202ENST00000396618 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
COCH-202ENST00000396618 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
COCH-202ENST00000396618 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
COCH-202ENST00000396618 HIRIP3Q9BW71 556 aaPredicted RBP21.17■□□□□ 0.98
COCH-202ENST00000396618 ERICH6Q7L0X2 663 aa21.16■□□□□ 0.98
COCH-202ENST00000396618 TONSLQ96HA7 1378 aa21.15■□□□□ 0.98
COCH-202ENST00000396618 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
COCH-202ENST00000396618 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
COCH-202ENST00000396618 UACAQ9BZF9 1416 aa21.1■□□□□ 0.97
COCH-202ENST00000396618 KDM5BQ9UGL1 1544 aa21.1■□□□□ 0.97
COCH-202ENST00000396618 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
COCH-202ENST00000396618 PPP4R2Q9NY27 417 aa21.1■□□□□ 0.97
COCH-202ENST00000396618 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.971e-11■■□□□ 14
COCH-202ENST00000396618 CCDC18Q5T9S5 1454 aa21.09■□□□□ 0.97
COCH-202ENST00000396618 HFM1A2PYH4 1435 aa21.07■□□□□ 0.96
COCH-202ENST00000396618 PTPN23Q9H3S7 1636 aa21.05■□□□□ 0.96
COCH-202ENST00000396618 EFCAB5A4FU69 1503 aa21.05■□□□□ 0.96
COCH-202ENST00000396618 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
COCH-202ENST00000396618 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
COCH-202ENST00000396618 NCOA2Q15596 1464 aa21.03■□□□□ 0.96
COCH-202ENST00000396618 FGD6Q6ZV73 1430 aa21.03■□□□□ 0.96
COCH-202ENST00000396618 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
COCH-202ENST00000396618 DEKP35659 375 aaKnown RBP20.96■□□□□ 0.95
COCH-202ENST00000396618 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
COCH-202ENST00000396618 CNTLNQ9NXG0 1405 aa20.95■□□□□ 0.94
COCH-202ENST00000396618 NAIPQ13075 1403 aa20.94■□□□□ 0.94
COCH-202ENST00000396618 PTPRKQ15262 1439 aa20.94■□□□□ 0.94
COCH-202ENST00000396618 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
COCH-202ENST00000396618 ZBED9Q6R2W3 1325 aa20.91■□□□□ 0.94
COCH-202ENST00000396618 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
COCH-202ENST00000396618 HECW1Q76N89 1606 aa20.88■□□□□ 0.93
COCH-202ENST00000396618 FMN1Q68DA7 1419 aa20.88■□□□□ 0.93
COCH-202ENST00000396618 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
COCH-202ENST00000396618 HSPA5P11021 654 aaKnown RBP20.87■□□□□ 0.93
COCH-202ENST00000396618 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
COCH-202ENST00000396618 GCC2Q8IWJ2 1684 aa20.85■□□□□ 0.93
COCH-202ENST00000396618 POLR1AO95602 1720 aaPredicted RBP20.84■□□□□ 0.93
COCH-202ENST00000396618 NCOA1Q15788 1441 aa20.84■□□□□ 0.93
COCH-202ENST00000396618 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
COCH-202ENST00000396618 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.93
COCH-202ENST00000396618 B4GALNT3Q6L9W6 998 aa20.83■□□□□ 0.92
COCH-202ENST00000396618 PRKRIP1Q9H875 184 aaPredicted RBP20.83■□□□□ 0.92
COCH-202ENST00000396618 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
COCH-202ENST00000396618 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
COCH-202ENST00000396618 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
COCH-202ENST00000396618 CUL7Q14999 1698 aa20.82■□□□□ 0.92
COCH-202ENST00000396618 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
COCH-202ENST00000396618 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
COCH-202ENST00000396618 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
COCH-202ENST00000396618 LRRIQ1Q96JM4 1722 aa20.8■□□□□ 0.92
COCH-202ENST00000396618 SUPT6HQ7KZ85 1726 aaKnown RBP20.8■□□□□ 0.92
COCH-202ENST00000396618 DENND4BO75064 1496 aaPredicted RBP20.8■□□□□ 0.92
COCH-202ENST00000396618 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
COCH-202ENST00000396618 CCDC7Q96M83 1385 aa20.79■□□□□ 0.92
COCH-202ENST00000396618 AKNAQ7Z591 1439 aa20.78■□□□□ 0.92
COCH-202ENST00000396618 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.91
COCH-202ENST00000396618 SMG6Q86US8 1419 aaKnown RBP20.76■□□□□ 0.91
COCH-202ENST00000396618 EHBP1L1Q8N3D4 1523 aa20.76■□□□□ 0.91
COCH-202ENST00000396618 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
COCH-202ENST00000396618 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
COCH-202ENST00000396618 SAMD9Q5K651 1589 aa20.75■□□□□ 0.91
COCH-202ENST00000396618 RNF123Q5XPI4 1314 aa20.74■□□□□ 0.91
COCH-202ENST00000396618 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
COCH-202ENST00000396618 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
COCH-202ENST00000396618 TCOF1Q13428 1488 aaKnown RBP20.73■□□□□ 0.91
COCH-202ENST00000396618 UGGT2Q9NYU1 1516 aa20.73■□□□□ 0.91
COCH-202ENST00000396618 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
COCH-202ENST00000396618 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
COCH-202ENST00000396618 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
COCH-202ENST00000396618 PRKCSHP14314 528 aaPredicted RBP20.69■□□□□ 0.9
COCH-202ENST00000396618 C11orf95C9JLR9 678 aaPredicted RBP20.68■□□□□ 0.9
COCH-202ENST00000396618 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
COCH-202ENST00000396618 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
COCH-202ENST00000396618 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
COCH-202ENST00000396618 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
COCH-202ENST00000396618 NBR1Q14596 966 aa20.66■□□□□ 0.9
COCH-202ENST00000396618 KDM6BO15054 1643 aa20.63■□□□□ 0.89
COCH-202ENST00000396618 L3MBTL2Q969R5 705 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms