RNA–Protein interactions for RNA: ENST00000396618.7

COCH-202, Transcript of cochlin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COCH, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-202ENST00000396618 NISCHQ9Y2I1 1504 aa29.69■■■□□ 2.34
COCH-202ENST00000396618 HRCP23327 699 aa25.67■■□□□ 1.7
COCH-202ENST00000396618 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
COCH-202ENST00000396618 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
COCH-202ENST00000396618 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
COCH-202ENST00000396618 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
COCH-202ENST00000396618 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
COCH-202ENST00000396618 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
COCH-202ENST00000396618 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
COCH-202ENST00000396618 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
COCH-202ENST00000396618 PPARGC1BQ86YN6 1023 aaKnown RBP24.86■■□□□ 1.57
COCH-202ENST00000396618 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
COCH-202ENST00000396618 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
COCH-202ENST00000396618 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
COCH-202ENST00000396618 ZEB1P37275 1124 aaPredicted RBP24.36■■□□□ 1.49
COCH-202ENST00000396618 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
COCH-202ENST00000396618 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
COCH-202ENST00000396618 ABCC9O60706 1549 aa24.01■■□□□ 1.43
COCH-202ENST00000396618 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
COCH-202ENST00000396618 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
COCH-202ENST00000396618 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
COCH-202ENST00000396618 MYT1Q01538 1121 aa23.65■■□□□ 1.38
COCH-202ENST00000396618 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
COCH-202ENST00000396618 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
COCH-202ENST00000396618 FAM9AQ8IZU1 332 aaPredicted RBP23.41■■□□□ 1.34
COCH-202ENST00000396618 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
COCH-202ENST00000396618 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
COCH-202ENST00000396618 GTF3C3Q9Y5Q9 886 aa23.29■■□□□ 1.32
COCH-202ENST00000396618 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
COCH-202ENST00000396618 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
COCH-202ENST00000396618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.27■■□□□ 1.32
COCH-202ENST00000396618 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
COCH-202ENST00000396618 EIF4G1Q04637 1599 aaKnown RBP23.13■■□□□ 1.29
COCH-202ENST00000396618 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
COCH-202ENST00000396618 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.28
COCH-202ENST00000396618 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
COCH-202ENST00000396618 WIZO95785 1651 aa23■■□□□ 1.27
COCH-202ENST00000396618 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
COCH-202ENST00000396618 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
COCH-202ENST00000396618 NACADO15069 1562 aa22.9■■□□□ 1.26
COCH-202ENST00000396618 CEP162Q5TB80 1403 aa22.88■■□□□ 1.25
COCH-202ENST00000396618 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
COCH-202ENST00000396618 EEA1Q15075 1411 aa22.75■■□□□ 1.23
COCH-202ENST00000396618 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
COCH-202ENST00000396618 ABCC8Q09428 1581 aa22.7■■□□□ 1.22
COCH-202ENST00000396618 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
COCH-202ENST00000396618 MIER1Q8N108 512 aa22.66■■□□□ 1.22
COCH-202ENST00000396618 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
COCH-202ENST00000396618 SOGA1O94964 1423 aa22.61■■□□□ 1.21
COCH-202ENST00000396618 CLSPNQ9HAW4 1339 aa22.59■■□□□ 1.21
COCH-202ENST00000396618 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
COCH-202ENST00000396618 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
COCH-202ENST00000396618 GOLGA3Q08378 1498 aa22.57■■□□□ 1.2
COCH-202ENST00000396618 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
COCH-202ENST00000396618 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
COCH-202ENST00000396618 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
COCH-202ENST00000396618 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
COCH-202ENST00000396618 KIF21BO75037 1637 aa22.42■■□□□ 1.18
COCH-202ENST00000396618 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
COCH-202ENST00000396618 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
COCH-202ENST00000396618 HNRNPUL2Q1KMD3 747 aaKnown RBP22.33■■□□□ 1.17
COCH-202ENST00000396618 SUPT16HQ9Y5B9 1047 aaKnown RBP22.31■■□□□ 1.16
COCH-202ENST00000396618 CLIP1P30622 1438 aa22.29■■□□□ 1.16
COCH-202ENST00000396618 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
COCH-202ENST00000396618 DHX57Q6P158 1386 aaKnown RBP22.17■■□□□ 1.14
COCH-202ENST00000396618 TSHZ2Q9NRE2 1034 aa22.16■■□□□ 1.14
COCH-202ENST00000396618 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
COCH-202ENST00000396618 ANP32EQ9BTT0 268 aa22.15■■□□□ 1.14
COCH-202ENST00000396618 APLP2Q06481 763 aa22.12■■□□□ 1.13
COCH-202ENST00000396618 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
COCH-202ENST00000396618 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
COCH-202ENST00000396618 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
COCH-202ENST00000396618 CUX2O14529 1486 aa22.03■■□□□ 1.12
COCH-202ENST00000396618 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
COCH-202ENST00000396618 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
COCH-202ENST00000396618 ARAP1Q96P48 1450 aa21.89■■□□□ 1.1
COCH-202ENST00000396618 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
COCH-202ENST00000396618 BCL11AQ9H165 835 aa21.85■■□□□ 1.09
COCH-202ENST00000396618 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
COCH-202ENST00000396618 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
COCH-202ENST00000396618 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
COCH-202ENST00000396618 CCNB3Q8WWL7 1395 aa21.75■■□□□ 1.07
COCH-202ENST00000396618 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
COCH-202ENST00000396618 MAPKBP1O60336 1514 aa21.74■■□□□ 1.07
COCH-202ENST00000396618 KCNH8Q96L42 1107 aa21.71■■□□□ 1.07
COCH-202ENST00000396618 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
COCH-202ENST00000396618 FKBP8Q14318 412 aa21.68■■□□□ 1.06
COCH-202ENST00000396618 RANGAP1P46060 587 aaPredicted RBP21.65■■□□□ 1.06
COCH-202ENST00000396618 RBM19Q9Y4C8 960 aaKnown RBP21.65■■□□□ 1.06
COCH-202ENST00000396618 RAB3GAP2Q9H2M9 1393 aa21.63■■□□□ 1.05
COCH-202ENST00000396618 BCANQ96GW7 911 aa21.62■■□□□ 1.05
COCH-202ENST00000396618 MAP3K1Q13233 1512 aa21.62■■□□□ 1.05
COCH-202ENST00000396618 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
COCH-202ENST00000396618 CCER2I3L3R5 266 aa21.59■■□□□ 1.05
COCH-202ENST00000396618 NEFLP07196 543 aa21.59■■□□□ 1.05
COCH-202ENST00000396618 ARHGAP35Q9NRY4 1499 aa21.58■■□□□ 1.05
COCH-202ENST00000396618 PPP1R15AO75807 674 aaPredicted RBP21.58■■□□□ 1.04
COCH-202ENST00000396618 TIMELESSQ9UNS1 1208 aa21.57■■□□□ 1.04
COCH-202ENST00000396618 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
COCH-202ENST00000396618 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms