RNA–Protein interactions for RNA: ENST00000396384.1

TUBB-207, Transcript of tubulin beta class I, humanhuman

TSL 3 BASIC

Gene TUBB, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-207ENST00000396384 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
TUBB-207ENST00000396384 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
TUBB-207ENST00000396384 CLIP1P30622 1438 aa15.6■□□□□ 0.09
TUBB-207ENST00000396384 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
TUBB-207ENST00000396384 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
TUBB-207ENST00000396384 GTF3C3Q9Y5Q9 886 aa15.55■□□□□ 0.08
TUBB-207ENST00000396384 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
TUBB-207ENST00000396384 APLP2Q06481 763 aa15.54■□□□□ 0.08
TUBB-207ENST00000396384 VPS8Q8N3P4 1428 aa15.54■□□□□ 0.08
TUBB-207ENST00000396384 CUL7Q14999 1698 aa15.54■□□□□ 0.08
TUBB-207ENST00000396384 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
TUBB-207ENST00000396384 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
TUBB-207ENST00000396384 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
TUBB-207ENST00000396384 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
TUBB-207ENST00000396384 FHAD1B1AJZ9 1412 aa15.45■□□□□ 0.06
TUBB-207ENST00000396384 MYT1Q01538 1121 aa15.44■□□□□ 0.06
TUBB-207ENST00000396384 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
TUBB-207ENST00000396384 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
TUBB-207ENST00000396384 MIER1Q8N108 512 aa15.39■□□□□ 0.06
TUBB-207ENST00000396384 FBLN2P98095 1184 aa15.39■□□□□ 0.05
TUBB-207ENST00000396384 CTTNBP2Q8WZ74 1663 aa15.38■□□□□ 0.05
TUBB-207ENST00000396384 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
TUBB-207ENST00000396384 MAGI1Q96QZ7 1491 aaPredicted RBP15.37■□□□□ 0.05
TUBB-207ENST00000396384 P3H3Q8IVL6 736 aa15.36■□□□□ 0.05
TUBB-207ENST00000396384 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
TUBB-207ENST00000396384 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
TUBB-207ENST00000396384 SYNJ2O15056 1496 aa15.33■□□□□ 0.04
TUBB-207ENST00000396384 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
TUBB-207ENST00000396384 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
TUBB-207ENST00000396384 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
TUBB-207ENST00000396384 IQGAP2Q13576 1575 aa15.26■□□□□ 0.03
TUBB-207ENST00000396384 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
TUBB-207ENST00000396384 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
TUBB-207ENST00000396384 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
TUBB-207ENST00000396384 KIAA0586Q9BVV6 1533 aa15.23■□□□□ 0.03
TUBB-207ENST00000396384 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
TUBB-207ENST00000396384 CHD1O14646 1710 aa15.22■□□□□ 0.03
TUBB-207ENST00000396384 NUP160Q12769 1436 aa15.21■□□□□ 0.03
TUBB-207ENST00000396384 RRBP1Q9P2E9 1410 aaKnown RBP15.2■□□□□ 0.02
TUBB-207ENST00000396384 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
TUBB-207ENST00000396384 UGGT2Q9NYU1 1516 aa15.17■□□□□ 0.02
TUBB-207ENST00000396384 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
TUBB-207ENST00000396384 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
TUBB-207ENST00000396384 CCNB3Q8WWL7 1395 aa15.15■□□□□ 0.02
TUBB-207ENST00000396384 DISP1Q96F81 1524 aa15.14■□□□□ 0.01
TUBB-207ENST00000396384 TIAM1Q13009 1591 aa15.13■□□□□ 0.01
TUBB-207ENST00000396384 ITGAEP38570 1179 aa15.12■□□□□ 0.01
TUBB-207ENST00000396384 FMN1Q68DA7 1419 aa15.12■□□□□ 0.01
TUBB-207ENST00000396384 KIAA0556O60303 1618 aa15.12■□□□□ 0.01
TUBB-207ENST00000396384 CFAP43Q8NDM7 1665 aa15.11■□□□□ 0.01
TUBB-207ENST00000396384 CASKIN1Q8WXD9 1431 aa15.09■□□□□ 0.01
TUBB-207ENST00000396384 FYCO1Q9BQS8 1478 aa15.08■□□□□ 0
TUBB-207ENST00000396384 LRRIQ1Q96JM4 1722 aa15.06■□□□□ 0
TUBB-207ENST00000396384 MAP3K1Q13233 1512 aa15.06■□□□□ 0
TUBB-207ENST00000396384 ARID3CA6NKF2 412 aa15.05■□□□□ 0
TUBB-207ENST00000396384 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
TUBB-207ENST00000396384 CARMIL2Q6F5E8 1435 aa15.05■□□□□ -0
TUBB-207ENST00000396384 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
TUBB-207ENST00000396384 RAB3GAP2Q9H2M9 1393 aa15.03■□□□□ -0
TUBB-207ENST00000396384 CLASP1Q7Z460 1538 aa15.01□□□□□ -0.01
TUBB-207ENST00000396384 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
TUBB-207ENST00000396384 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
TUBB-207ENST00000396384 PLB1Q6P1J6 1458 aa14.99□□□□□ -0.01
TUBB-207ENST00000396384 HECW1Q76N89 1606 aa14.97□□□□□ -0.01
TUBB-207ENST00000396384 SETD5Q9C0A6 1442 aa14.97□□□□□ -0.01
TUBB-207ENST00000396384 MAPKBP1O60336 1514 aa14.96□□□□□ -0.01
TUBB-207ENST00000396384 CDK13Q14004 1512 aaKnown RBP14.96□□□□□ -0.01
TUBB-207ENST00000396384 EPRSP07814 1512 aaKnown RBP14.96□□□□□ -0.01
TUBB-207ENST00000396384 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
TUBB-207ENST00000396384 PHLDB1Q86UU1 1377 aa14.95□□□□□ -0.02
TUBB-207ENST00000396384 FAM50AQ14320 339 aaKnown RBP14.95□□□□□ -0.02
TUBB-207ENST00000396384 NUP153P49790 1475 aaKnown RBP14.95□□□□□ -0.02
TUBB-207ENST00000396384 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
TUBB-207ENST00000396384 PTPRGP23470 1445 aa14.94□□□□□ -0.02
TUBB-207ENST00000396384 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
TUBB-207ENST00000396384 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
TUBB-207ENST00000396384 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
TUBB-207ENST00000396384 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
TUBB-207ENST00000396384 ABCA8O94911 1581 aa14.89□□□□□ -0.03
TUBB-207ENST00000396384 SIN3AQ96ST3 1273 aa14.89□□□□□ -0.03
TUBB-207ENST00000396384 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
TUBB-207ENST00000396384 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
TUBB-207ENST00000396384 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
TUBB-207ENST00000396384 NCOA2Q15596 1464 aa14.84□□□□□ -0.03
TUBB-207ENST00000396384 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
TUBB-207ENST00000396384 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
TUBB-207ENST00000396384 ATP10BO94823 1461 aa14.83□□□□□ -0.04
TUBB-207ENST00000396384 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
TUBB-207ENST00000396384 CDK11AQ9UQ88 783 aaPredicted RBP14.81□□□□□ -0.04
TUBB-207ENST00000396384 FGD6Q6ZV73 1430 aa14.79□□□□□ -0.04
TUBB-207ENST00000396384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.78□□□□□ -0.04
TUBB-207ENST00000396384 ABCC2Q92887 1545 aa14.78□□□□□ -0.04
TUBB-207ENST00000396384 ARHGEF11O15085 1522 aa14.77□□□□□ -0.04
TUBB-207ENST00000396384 TROQ12816 1431 aaPredicted RBP14.77□□□□□ -0.05
TUBB-207ENST00000396384 PLEKHD1A6NEE1 506 aa14.77□□□□□ -0.05
TUBB-207ENST00000396384 PPP1R15AO75807 674 aaPredicted RBP14.77□□□□□ -0.05
TUBB-207ENST00000396384 MYOM3Q5VTT5 1437 aa14.76□□□□□ -0.05
TUBB-207ENST00000396384 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
TUBB-207ENST00000396384 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
TUBB-207ENST00000396384 KIF14Q15058 1648 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms