RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 JPH4Q96JJ6 628 aa28.5■■■□□ 2.15
SNCA-205ENST00000394991 ABCC10Q5T3U5 1492 aa28.43■■■□□ 2.14
SNCA-205ENST00000394991 ADCY10Q96PN6 1610 aa28.42■■■□□ 2.14
SNCA-205ENST00000394991 MAPKBP1O60336 1514 aa28.42■■■□□ 2.14
SNCA-205ENST00000394991 DIP2BQ9P265 1576 aa28.41■■■□□ 2.14
SNCA-205ENST00000394991 FAM69CQ0P6D2 419 aa28.35■■■□□ 2.13
SNCA-205ENST00000394991 KIAA0586Q9BVV6 1533 aa28.28■■■□□ 2.12
SNCA-205ENST00000394991 NPM1P06748 294 aaKnown RBP eCLIP28.27■■■□□ 2.12
SNCA-205ENST00000394991 TSPOAP1O95153 1857 aa28.27■■■□□ 2.12
SNCA-205ENST00000394991 CUL7Q14999 1698 aa28.26■■■□□ 2.11
SNCA-205ENST00000394991 KDM6BO15054 1643 aa28.25■■■□□ 2.11
SNCA-205ENST00000394991 IGF1RP08069 1367 aa28.21■■■□□ 2.11
SNCA-205ENST00000394991 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
SNCA-205ENST00000394991 KDM4FA0A1W2PPD8 638 aa28.1■■■□□ 2.09
SNCA-205ENST00000394991 PTPRGP23470 1445 aa28.06■■■□□ 2.08
SNCA-205ENST00000394991 PPRC1Q5VV67 1664 aaKnown RBP28.05■■■□□ 2.08
SNCA-205ENST00000394991 ABCC2Q92887 1545 aa28.02■■■□□ 2.08
SNCA-205ENST00000394991 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
SNCA-205ENST00000394991 IQGAP2Q13576 1575 aa27.99■■■□□ 2.07
SNCA-205ENST00000394991 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
SNCA-205ENST00000394991 TTBK1Q5TCY1 1321 aaPredicted RBP27.98■■■□□ 2.07
SNCA-205ENST00000394991 GLI2P10070 1586 aa27.97■■■□□ 2.07
SNCA-205ENST00000394991 CARMIL2Q6F5E8 1435 aa27.96■■■□□ 2.07
SNCA-205ENST00000394991 ASXL2Q76L83 1435 aa27.96■■■□□ 2.07
SNCA-205ENST00000394991 PLB1Q6P1J6 1458 aa27.93■■■□□ 2.06
SNCA-205ENST00000394991 UHRF1BP1LA0JNW5 1464 aa27.92■■■□□ 2.06
SNCA-205ENST00000394991 DISP1Q96F81 1524 aa27.89■■■□□ 2.06
SNCA-205ENST00000394991 UACAQ9BZF9 1416 aa27.86■■■□□ 2.05
SNCA-205ENST00000394991 MAP3K4Q9Y6R4 1608 aa27.85■■■□□ 2.05
SNCA-205ENST00000394991 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
SNCA-205ENST00000394991 ADGRL1O94910 1474 aa27.81■■■□□ 2.04
SNCA-205ENST00000394991 COL17A1Q9UMD9 1497 aaPredicted RBP27.81■■■□□ 2.04
SNCA-205ENST00000394991 EPRSP07814 1512 aaKnown RBP27.81■■■□□ 2.04
SNCA-205ENST00000394991 KDM5BQ9UGL1 1544 aa27.81■■■□□ 2.04
SNCA-205ENST00000394991 UGGT2Q9NYU1 1516 aa27.79■■■□□ 2.04
SNCA-205ENST00000394991 KIAA0556O60303 1618 aa27.77■■■□□ 2.04
SNCA-205ENST00000394991 RAPGEF2Q9Y4G8 1499 aa27.71■■■□□ 2.03
SNCA-205ENST00000394991 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.02
SNCA-205ENST00000394991 ILDR1Q86SU0 546 aaPredicted RBP27.66■■■□□ 2.02
SNCA-205ENST00000394991 CTTNBP2Q8WZ74 1663 aa27.64■■■□□ 2.02
SNCA-205ENST00000394991 WDR7Q9Y4E6 1490 aa27.62■■■□□ 2.01
SNCA-205ENST00000394991 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
SNCA-205ENST00000394991 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
SNCA-205ENST00000394991 ABCA8O94911 1581 aa27.54■■■□□ 2
SNCA-205ENST00000394991 MAGI3Q5TCQ9 1506 aa27.5■■□□□ 1.99
SNCA-205ENST00000394991 CD109Q6YHK3 1445 aa27.47■■□□□ 1.99
SNCA-205ENST00000394991 GOLGA3Q08378 1498 aa27.46■■□□□ 1.99
SNCA-205ENST00000394991 KIF21BO75037 1637 aa27.42■■□□□ 1.98
SNCA-205ENST00000394991 KCNH8Q96L42 1107 aa27.4■■□□□ 1.98
SNCA-205ENST00000394991 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
SNCA-205ENST00000394991 ARAP3Q8WWN8 1544 aa27.3■■□□□ 1.96
SNCA-205ENST00000394991 ABCA9Q8IUA7 1624 aa27.26■■□□□ 1.95
SNCA-205ENST00000394991 ATP10BO94823 1461 aa27.25■■□□□ 1.95
SNCA-205ENST00000394991 ARID3CA6NKF2 412 aa27.23■■□□□ 1.95
SNCA-205ENST00000394991 ADAMTSL3P82987 1691 aa27.21■■□□□ 1.95
SNCA-205ENST00000394991 SAMD9Q5K651 1589 aa27.18■■□□□ 1.94
SNCA-205ENST00000394991 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
SNCA-205ENST00000394991 RAPGEF6Q8TEU7 1601 aa27.16■■□□□ 1.94
SNCA-205ENST00000394991 FRMPD1Q5SYB0 1578 aa27.14■■□□□ 1.94
SNCA-205ENST00000394991 PTPRMP28827 1452 aa27.13■■□□□ 1.93
SNCA-205ENST00000394991 PHLDB1Q86UU1 1377 aa27.11■■□□□ 1.93
SNCA-205ENST00000394991 BCORL1Q5H9F3 1711 aa27.1■■□□□ 1.93
SNCA-205ENST00000394991 NEO1Q92859 1461 aa27.09■■□□□ 1.93
SNCA-205ENST00000394991 RAPGEF3O95398 923 aa27.08■■□□□ 1.93
SNCA-205ENST00000394991 MADDQ8WXG6 1647 aa27.06■■□□□ 1.92
SNCA-205ENST00000394991 FAM9AQ8IZU1 332 aaPredicted RBP27.04■■□□□ 1.92
SNCA-205ENST00000394991 NUP153P49790 1475 aaKnown RBP27.03■■□□□ 1.92
SNCA-205ENST00000394991 RICTORQ6R327 1708 aa27■■□□□ 1.91
SNCA-205ENST00000394991 ARHGEF40Q8TER5 1519 aa27■■□□□ 1.91
SNCA-205ENST00000394991 FBXO41Q8TF61 875 aa26.99■■□□□ 1.91
SNCA-205ENST00000394991 PCF11O94913 1555 aaKnown RBP26.98■■□□□ 1.91
SNCA-205ENST00000394991 RIMS1Q86UR5 1692 aaKnown RBP26.97■■□□□ 1.91
SNCA-205ENST00000394991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.95■■□□□ 1.9
SNCA-205ENST00000394991 HNRNPUL2Q1KMD3 747 aaKnown RBP26.95■■□□□ 1.9
SNCA-205ENST00000394991 LMTK3Q96Q04 1460 aa26.94■■□□□ 1.9
SNCA-205ENST00000394991 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
SNCA-205ENST00000394991 FHOD3Q2V2M9 1422 aa26.93■■□□□ 1.9
SNCA-205ENST00000394991 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
SNCA-205ENST00000394991 SIGLEC1Q9BZZ2 1709 aa26.9■■□□□ 1.9
SNCA-205ENST00000394991 CFAP74Q9C0B2 1584 aa26.89■■□□□ 1.9
SNCA-205ENST00000394991 DENND4BO75064 1496 aaPredicted RBP26.89■■□□□ 1.9
SNCA-205ENST00000394991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.88■■□□□ 1.89
SNCA-205ENST00000394991 TTC37Q6PGP7 1564 aa26.88■■□□□ 1.89
SNCA-205ENST00000394991 AKNAQ7Z591 1439 aa26.87■■□□□ 1.89
SNCA-205ENST00000394991 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
SNCA-205ENST00000394991 FANCAO15360 1455 aa26.85■■□□□ 1.89
SNCA-205ENST00000394991 ZMYM4Q5VZL5 1548 aa26.85■■□□□ 1.89
SNCA-205ENST00000394991 PLEKHD1A6NEE1 506 aa26.8■■□□□ 1.88
SNCA-205ENST00000394991 ZFYVE16Q7Z3T8 1539 aa26.8■■□□□ 1.88
SNCA-205ENST00000394991 EEA1Q15075 1411 aa26.78■■□□□ 1.88
SNCA-205ENST00000394991 YEATS2Q9ULM3 1422 aa26.78■■□□□ 1.88
SNCA-205ENST00000394991 EFCAB5A4FU69 1503 aa26.77■■□□□ 1.88
SNCA-205ENST00000394991 FER1L4A9Z1Z3 1794 aa26.76■■□□□ 1.87
SNCA-205ENST00000394991 HECW1Q76N89 1606 aa26.76■■□□□ 1.87
SNCA-205ENST00000394991 CDK13Q14004 1512 aaKnown RBP26.75■■□□□ 1.87
SNCA-205ENST00000394991 HSPA2P54652 639 aa26.73■■□□□ 1.87
SNCA-205ENST00000394991 POGZQ7Z3K3 1410 aa26.73■■□□□ 1.87
SNCA-205ENST00000394991 MAGI2Q86UL8 1455 aa26.71■■□□□ 1.87
SNCA-205ENST00000394991 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
SNCA-205ENST00000394991 MYO5CQ9NQX4 1742 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms